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The map label for this gene is ygdL [C]

Identifier: 119867835

GI number: 119867835

Start: 1904457

End: 1906586

Strand: Reverse

Name: ygdL [C]

Synonym: Mkms_1796

Alternate gene names: 119867835

Gene position: 1906586-1904457 (Counterclockwise)

Preceding gene: 119867836

Following gene: 119867834

Centisome position: 33.23

GC content: 71.88

Gene sequence:

>2130_bases
ATGACACGGTCCACCACTGATCAGACTGTCTACACCGCCTCCGTTCTCACCGACGACGCAGACCGCGACGCACTCGCGAC
GCTGCGGTCCGATCCCGGGATCGAGTTCGTCGACCGCGCCGCGGAACTGCGCTCGGCCCTGGCCGAACTGCGTCCGCCCG
CGGACGGTGAGCTGGCGGATGAGCCGATCCGGTGGGCGTACTTCCCGTGGCGGCGCACGGTCGTCAGCGTCCTCGGCCCT
CGTGCCCACAGCCGGCTCCGACTCGACCGCAACCGCAATCTGATCACCGCGTCGGAACAACAGCGCCTCGGTCGGCTGCG
GGTCGGGGTGATCGGTCTCAGCGTCGGCCACGCCGTGGCCCACACGCTTGCCGCACAGGGGGTCTGCGGCGAACTGCGCC
TCGCCGACTTCGACGGCCTCGAGGTGTCGAACCTCAACCGCGTCCCCGCCAGCCTGGTCGACCTCGGGGTGAACAAGGCG
GTGGTCGCGGCCCGCCGGATCGCCGAACTCGATCCTCACCTCCCGGTGCAGGTCTTGACCGACGGTGTCACTCCGGCCAC
GGTCGAGGAGTTCCTCGACGGGCTCGACGTGGTGGTGGAGGAGTGCGATTCGCTGGACGTGAAGGTCCTGGTGCGTGAGC
ACGCCCGCGCCCGCCGCATCCCGGTCCTGATGGCGACCAGCGATCGCGGCCTACTCGACGTCGAACGCTTCGACGTCGAC
CCGTCGCGGCCGCTGCTGCACGGGCTGCTCGGCGACATCGACTCGGCGGCACTGTCCGGGCTGACGAGCAAGGACAAGGT
GCCCTACGTGCTGCGCATCCTCGACGCGAGCGCGCTGTCGTCGCGGATGGCCGCGTCGCTGGTGGAAGTCGGGACGAGCC
TGACGACATGGCCGCAGCTCGCCGGTGAAGTCGCGCTGGGTGCCACCGCCGTCACCGAGGCGGTGCGCCGCATCGGCCTC
GGCGAACCGCTGCCCTCGGGCCGGGTGCGGATGGATGCCGCTGCGCTCCTCGACCGCGTCGAGGACCCGCTCGCTTCCCC
GGCCGTCGAGGACACGGCCGACGATCGGGTGGCCGATTCCGAAACGGACTCCGTCCCCGAGAAGGTCGCCGCCGCCGCCG
TGCGGGCCCCCTCGGGAGGCAACTCGCAGCCGTGGCACATCGAACTGCAGTCCGACGCCGTACACCTGTGGGTGGCCCCC
GAGGCCACGAGCGCGATGGACGTCGCGTACCGGGGTAGCGCGGTCGCACTCGGTGCGGCGGTCTTCAACGCGCGGATCGC
CGCGGCGGCCCACCACCGCGCCGCCGACGTGCACATCGAGCGCGGCGACGAGCGCTCGCCCCTTCGGGCCGTCGTCCGCC
TCGGGCGGGCCGAGGACGAGGAGCTGGCGCGTCTCTACCCCGCGATGCTGCGGCGGGAGACCAACCGGCATCACGGGTCC
GGCACACCGATCGGCGCTCCCGAGATCGAGGCGATGGCCGCCGCCGCGCGGGCCGAAGGTGGCCGCCTGGCGATGCTCAC
CGACACCCGCGACATGGCCGAGGCCGCCGAGATCCTCGCGGCCACCGACCGGATCCGGTACCTCACACCACGTCTGCACT
CGGAGATGTTCTCGGAGCTGCGCTGGCCCGGGGATCCGGCGCCCGACTCCGGGATCGACGTGCGGACACTGGAGTTGGGC
CCGACGGACCTGGTGAAGCTCGACATCCTGCGCCGCGGCGAGGTGATGGCCGATCTGGCCCGATGGGAGGCGGGGTCGGC
GCTGGGCGAGGACACCTACGACCGGCTGACGTCCAGCGCAGCACTGGGTGTCGTCACCGTCACCGGACACACACTGCCGG
ACTACCTGCGCGGGGGCGCGGCGACCGAGGCGGTCTGGATCGCCGCCGAACAGCACGGCGTCGCAACCCATCCGGTGTCC
CCGGTGTTCCTCTACGCGCACGGCGACCGCGAACTCGCCGAACTCTCCCCGGCGTTCGCCGGTGAACTCGGCGAGCTGCA
GCGCCGTTTCCGCGCGCTGACCGGCATCGGCGCCGAGGAGTCCGAGGCGTTGGTCCTACGCTTCTCCATCGCGCCCCGCC
CGTCGATGCGCAGCAGACGCCGACGCTTGAGCACCCCGGCACCGGCATGA

Upstream 100 bases:

>100_bases
CCGACCCCAAGCAGGTTTCGACGTTCTTCGCGGAGACGCGGCAGGTGACGGCGCAACTCGACCGGATCGGCCGACTCACG
TCCGCCGCCGCGACGGTCTG

Downstream 100 bases:

>100_bases
CACCACCGGGAACGGAGACGACCGTGCCGAGAAACCTCGAGGTCCTCGTGACCGCGGTCGCCATCGACCTGATGGCGGTC
ACGGCGGCGACCTCAGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 709; Mature: 708

Protein sequence:

>709_residues
MTRSTTDQTVYTASVLTDDADRDALATLRSDPGIEFVDRAAELRSALAELRPPADGELADEPIRWAYFPWRRTVVSVLGP
RAHSRLRLDRNRNLITASEQQRLGRLRVGVIGLSVGHAVAHTLAAQGVCGELRLADFDGLEVSNLNRVPASLVDLGVNKA
VVAARRIAELDPHLPVQVLTDGVTPATVEEFLDGLDVVVEECDSLDVKVLVREHARARRIPVLMATSDRGLLDVERFDVD
PSRPLLHGLLGDIDSAALSGLTSKDKVPYVLRILDASALSSRMAASLVEVGTSLTTWPQLAGEVALGATAVTEAVRRIGL
GEPLPSGRVRMDAAALLDRVEDPLASPAVEDTADDRVADSETDSVPEKVAAAAVRAPSGGNSQPWHIELQSDAVHLWVAP
EATSAMDVAYRGSAVALGAAVFNARIAAAAHHRAADVHIERGDERSPLRAVVRLGRAEDEELARLYPAMLRRETNRHHGS
GTPIGAPEIEAMAAAARAEGGRLAMLTDTRDMAEAAEILAATDRIRYLTPRLHSEMFSELRWPGDPAPDSGIDVRTLELG
PTDLVKLDILRRGEVMADLARWEAGSALGEDTYDRLTSSAALGVVTVTGHTLPDYLRGGAATEAVWIAAEQHGVATHPVS
PVFLYAHGDRELAELSPAFAGELGELQRRFRALTGIGAEESEALVLRFSIAPRPSMRSRRRRLSTPAPA

Sequences:

>Translated_709_residues
MTRSTTDQTVYTASVLTDDADRDALATLRSDPGIEFVDRAAELRSALAELRPPADGELADEPIRWAYFPWRRTVVSVLGP
RAHSRLRLDRNRNLITASEQQRLGRLRVGVIGLSVGHAVAHTLAAQGVCGELRLADFDGLEVSNLNRVPASLVDLGVNKA
VVAARRIAELDPHLPVQVLTDGVTPATVEEFLDGLDVVVEECDSLDVKVLVREHARARRIPVLMATSDRGLLDVERFDVD
PSRPLLHGLLGDIDSAALSGLTSKDKVPYVLRILDASALSSRMAASLVEVGTSLTTWPQLAGEVALGATAVTEAVRRIGL
GEPLPSGRVRMDAAALLDRVEDPLASPAVEDTADDRVADSETDSVPEKVAAAAVRAPSGGNSQPWHIELQSDAVHLWVAP
EATSAMDVAYRGSAVALGAAVFNARIAAAAHHRAADVHIERGDERSPLRAVVRLGRAEDEELARLYPAMLRRETNRHHGS
GTPIGAPEIEAMAAAARAEGGRLAMLTDTRDMAEAAEILAATDRIRYLTPRLHSEMFSELRWPGDPAPDSGIDVRTLELG
PTDLVKLDILRRGEVMADLARWEAGSALGEDTYDRLTSSAALGVVTVTGHTLPDYLRGGAATEAVWIAAEQHGVATHPVS
PVFLYAHGDRELAELSPAFAGELGELQRRFRALTGIGAEESEALVLRFSIAPRPSMRSRRRRLSTPAPA
>Mature_708_residues
TRSTTDQTVYTASVLTDDADRDALATLRSDPGIEFVDRAAELRSALAELRPPADGELADEPIRWAYFPWRRTVVSVLGPR
AHSRLRLDRNRNLITASEQQRLGRLRVGVIGLSVGHAVAHTLAAQGVCGELRLADFDGLEVSNLNRVPASLVDLGVNKAV
VAARRIAELDPHLPVQVLTDGVTPATVEEFLDGLDVVVEECDSLDVKVLVREHARARRIPVLMATSDRGLLDVERFDVDP
SRPLLHGLLGDIDSAALSGLTSKDKVPYVLRILDASALSSRMAASLVEVGTSLTTWPQLAGEVALGATAVTEAVRRIGLG
EPLPSGRVRMDAAALLDRVEDPLASPAVEDTADDRVADSETDSVPEKVAAAAVRAPSGGNSQPWHIELQSDAVHLWVAPE
ATSAMDVAYRGSAVALGAAVFNARIAAAAHHRAADVHIERGDERSPLRAVVRLGRAEDEELARLYPAMLRRETNRHHGSG
TPIGAPEIEAMAAAARAEGGRLAMLTDTRDMAEAAEILAATDRIRYLTPRLHSEMFSELRWPGDPAPDSGIDVRTLELGP
TDLVKLDILRRGEVMADLARWEAGSALGEDTYDRLTSSAALGVVTVTGHTLPDYLRGGAATEAVWIAAEQHGVATHPVSP
VFLYAHGDRELAELSPAFAGELGELQRRFRALTGIGAEESEALVLRFSIAPRPSMRSRRRRLSTPAPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 76143; Mature: 76012

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSTTDQTVYTASVLTDDADRDALATLRSDPGIEFVDRAAELRSALAELRPPADGELAD
CCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
EPIRWAYFPWRRTVVSVLGPRAHSRLRLDRNRNLITASEQQRLGRLRVGVIGLSVGHAVA
CCCEEEECHHHHHHHHHHCCCCHHHEEECCCCCEEECHHHHHHCHHEEEEEEEHHHHHHH
HTLAAQGVCGELRLADFDGLEVSNLNRVPASLVDLGVNKAVVAARRIAELDPHLPVQVLT
HHHHHCCCCCCEEEECCCCCEECCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHEE
DGVTPATVEEFLDGLDVVVEECDSLDVKVLVREHARARRIPVLMATSDRGLLDVERFDVD
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEHHHCCCC
PSRPLLHGLLGDIDSAALSGLTSKDKVPYVLRILDASALSSRMAASLVEVGTSLTTWPQL
CCHHHHHHHHHCHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AGEVALGATAVTEAVRRIGLGEPLPSGRVRMDAAALLDRVEDPLASPAVEDTADDRVADS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ETDSVPEKVAAAAVRAPSGGNSQPWHIELQSDAVHLWVAPEATSAMDVAYRGSAVALGAA
CCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEECCCCCCHHHHHCCCCHHHHHHH
VFNARIAAAAHHRAADVHIERGDERSPLRAVVRLGRAEDEELARLYPAMLRRETNRHHGS
HHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
GTPIGAPEIEAMAAAARAEGGRLAMLTDTRDMAEAAEILAATDRIRYLTPRLHSEMFSEL
CCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RWPGDPAPDSGIDVRTLELGPTDLVKLDILRRGEVMADLARWEAGSALGEDTYDRLTSSA
CCCCCCCCCCCCEEEEEECCCCCCEEHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHCC
ALGVVTVTGHTLPDYLRGGAATEAVWIAAEQHGVATHPVSPVFLYAHGDRELAELSPAFA
CEEEEEEECCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHCCHHHH
GELGELQRRFRALTGIGAEESEALVLRFSIAPRPSMRSRRRRLSTPAPA
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
TRSTTDQTVYTASVLTDDADRDALATLRSDPGIEFVDRAAELRSALAELRPPADGELAD
CCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
EPIRWAYFPWRRTVVSVLGPRAHSRLRLDRNRNLITASEQQRLGRLRVGVIGLSVGHAVA
CCCEEEECHHHHHHHHHHCCCCHHHEEECCCCCEEECHHHHHHCHHEEEEEEEHHHHHHH
HTLAAQGVCGELRLADFDGLEVSNLNRVPASLVDLGVNKAVVAARRIAELDPHLPVQVLT
HHHHHCCCCCCEEEECCCCCEECCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHEE
DGVTPATVEEFLDGLDVVVEECDSLDVKVLVREHARARRIPVLMATSDRGLLDVERFDVD
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEHHHCCCC
PSRPLLHGLLGDIDSAALSGLTSKDKVPYVLRILDASALSSRMAASLVEVGTSLTTWPQL
CCHHHHHHHHHCHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AGEVALGATAVTEAVRRIGLGEPLPSGRVRMDAAALLDRVEDPLASPAVEDTADDRVADS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ETDSVPEKVAAAAVRAPSGGNSQPWHIELQSDAVHLWVAPEATSAMDVAYRGSAVALGAA
CCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEECCCCCCHHHHHCCCCHHHHHHH
VFNARIAAAAHHRAADVHIERGDERSPLRAVVRLGRAEDEELARLYPAMLRRETNRHHGS
HHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
GTPIGAPEIEAMAAAARAEGGRLAMLTDTRDMAEAAEILAATDRIRYLTPRLHSEMFSEL
CCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RWPGDPAPDSGIDVRTLELGPTDLVKLDILRRGEVMADLARWEAGSALGEDTYDRLTSSA
CCCCCCCCCCCCEEEEEECCCCCCEEHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHCC
ALGVVTVTGHTLPDYLRGGAATEAVWIAAEQHGVATHPVSPVFLYAHGDRELAELSPAFA
CEEEEEEECCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHCCHHHH
GELGELQRRFRALTGIGAEESEALVLRFSIAPRPSMRSRRRRLSTPAPA
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]