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The map label for this gene is yngJ [H]

Identifier: 119867655

GI number: 119867655

Start: 1725780

End: 1727018

Strand: Reverse

Name: yngJ [H]

Synonym: Mkms_1610

Alternate gene names: 119867655

Gene position: 1727018-1725780 (Counterclockwise)

Preceding gene: 119867656

Following gene: 119867654

Centisome position: 30.1

GC content: 67.07

Gene sequence:

>1239_bases
ATGGATTTCACCCTCCCGGACCATCTTCCGGGCGTGCTCGCGGAGATGGACGCATTCATCGAGGCGGAGATCAAACCGCT
GGAACGCGAACACATGCAGTACTTCGACCGGCACCGCGAATACGCCCGCACCGACTGGGAGAACGGCGGTATCCCGCAGC
GTGCGTGGGAGGATCTGCTCGACGAGATGCGCCGCCGCGCCGACGCGGCCGGTTGGCTGCGGTACGGACTGCCCGAGCAG
TTCGGCGGCCGCGGCGGATCCAACATCGACATGGCCGTGATCCGGGAACACCTGGCGCACAAGGGTCTCGGTCTGCACAA
CGATCTGCAGGACGAGTCGTCGATCGTCGGCAACTTCCCGCAGGTCATCATGATGGACCGGTTCGGCACCGAACAGCAGA
AGGCCGAGTGGATCGAGGCGATGCTCACCGGGAAGCGGTCCATGGCCTTCGGTCTGACCGAACCGAACCACGGTTCGGAC
GCGACGTGGCTGGAGACCCGTGCCGAACGCGACGGCGACGGCTGGGTCATCAACGGCACCAAGCGGTGGAACACCGGTGT
GCACCGCGCGACCCACGATCTGATCTTCGCCCGCACCTCCGGCGATCCGGGTCAGGCCCGCGGCATCACCGCCTTCCTGG
TCCCGACCGACACACCGGGTTTCGAGGTGCCGTACTACTGGTGGACGTTCAACATGCCCACCGACCACGGCGAGGTGGTG
CTCACCGACGTGCGGGTGCCCGACGACGCCGTCCTCGGTGAAGTGGACCGCGGACTCGAGGTGGGTCAGACCTTCCTGCA
CGAGAACCGGATCCGGCAGGCCGCGAGCAGTCTCGGCGCCGCCCAGTACTGCATCGACCGCGCCGTGGAGTACGCCGGGC
AGCGCACGGTGTTCGGTAAGCCGCTCGCGGTCAACCAGGCGGTGCAGTGGCCGCTGGTGGAACTGCAGACCGAGGCGCAG
ATGGTGCGGCTGCTGGTGTACTACGCCGCCACCGAACTGGACCGCAGCCACCACATGGAGGTCTCCGACAAGGTGTCGAT
GGCGAACTACCGCGCCAACCGGCTGGTGTGCGAGGCCGCCGACCGGGCGATGCAGGTCCACGGCGGTGTCGGCTACAGCC
GCCACGAACCGTTCGAACACATCTACCGCCACCACCGGCGCTACCGGATCACCGAAGGCGCCGAGGAGATCCAGATCCGG
CGCGTCGCTCAACGGCTGTTCGGGTTCGGACGCAGGTGA

Upstream 100 bases:

>100_bases
ACGCGATCGCCACGCTGTCGACGATCTGGAAGAAGACGCTGTATGGATATTGATCCGACACCGCTGCCAACAACCGTGCA
CTCGGCGTAAGGAGATACAG

Downstream 100 bases:

>100_bases
GGACGGAACTCGAGGCGGTGCTGCGCCCGATCCTGGGCGAGGTGGCGGTCGAGAACCTGACCACGCTGACCGGTGGCGCG
AGCCGGACCACATGGGCGTT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MDFTLPDHLPGVLAEMDAFIEAEIKPLEREHMQYFDRHREYARTDWENGGIPQRAWEDLLDEMRRRADAAGWLRYGLPEQ
FGGRGGSNIDMAVIREHLAHKGLGLHNDLQDESSIVGNFPQVIMMDRFGTEQQKAEWIEAMLTGKRSMAFGLTEPNHGSD
ATWLETRAERDGDGWVINGTKRWNTGVHRATHDLIFARTSGDPGQARGITAFLVPTDTPGFEVPYYWWTFNMPTDHGEVV
LTDVRVPDDAVLGEVDRGLEVGQTFLHENRIRQAASSLGAAQYCIDRAVEYAGQRTVFGKPLAVNQAVQWPLVELQTEAQ
MVRLLVYYAATELDRSHHMEVSDKVSMANYRANRLVCEAADRAMQVHGGVGYSRHEPFEHIYRHHRRYRITEGAEEIQIR
RVAQRLFGFGRR

Sequences:

>Translated_412_residues
MDFTLPDHLPGVLAEMDAFIEAEIKPLEREHMQYFDRHREYARTDWENGGIPQRAWEDLLDEMRRRADAAGWLRYGLPEQ
FGGRGGSNIDMAVIREHLAHKGLGLHNDLQDESSIVGNFPQVIMMDRFGTEQQKAEWIEAMLTGKRSMAFGLTEPNHGSD
ATWLETRAERDGDGWVINGTKRWNTGVHRATHDLIFARTSGDPGQARGITAFLVPTDTPGFEVPYYWWTFNMPTDHGEVV
LTDVRVPDDAVLGEVDRGLEVGQTFLHENRIRQAASSLGAAQYCIDRAVEYAGQRTVFGKPLAVNQAVQWPLVELQTEAQ
MVRLLVYYAATELDRSHHMEVSDKVSMANYRANRLVCEAADRAMQVHGGVGYSRHEPFEHIYRHHRRYRITEGAEEIQIR
RVAQRLFGFGRR
>Mature_412_residues
MDFTLPDHLPGVLAEMDAFIEAEIKPLEREHMQYFDRHREYARTDWENGGIPQRAWEDLLDEMRRRADAAGWLRYGLPEQ
FGGRGGSNIDMAVIREHLAHKGLGLHNDLQDESSIVGNFPQVIMMDRFGTEQQKAEWIEAMLTGKRSMAFGLTEPNHGSD
ATWLETRAERDGDGWVINGTKRWNTGVHRATHDLIFARTSGDPGQARGITAFLVPTDTPGFEVPYYWWTFNMPTDHGEVV
LTDVRVPDDAVLGEVDRGLEVGQTFLHENRIRQAASSLGAAQYCIDRAVEYAGQRTVFGKPLAVNQAVQWPLVELQTEAQ
MVRLLVYYAATELDRSHHMEVSDKVSMANYRANRLVCEAADRAMQVHGGVGYSRHEPFEHIYRHHRRYRITEGAEEIQIR
RVAQRLFGFGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=344, Percent_Identity=31.6860465116279, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI4557231, Length=369, Percent_Identity=31.4363143631436, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI187960098, Length=369, Percent_Identity=31.4363143631436, Blast_Score=162, Evalue=7e-40,
Organism=Homo sapiens, GI4501859, Length=328, Percent_Identity=30.4878048780488, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI38505218, Length=401, Percent_Identity=28.428927680798, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI7656849, Length=356, Percent_Identity=29.2134831460674, Blast_Score=138, Evalue=9e-33,
Organism=Homo sapiens, GI21361497, Length=419, Percent_Identity=27.2076372315036, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI211971008, Length=357, Percent_Identity=28.8515406162465, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI48976061, Length=357, Percent_Identity=28.8515406162465, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI4501857, Length=376, Percent_Identity=28.7234042553192, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI226958412, Length=351, Percent_Identity=27.0655270655271, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI226958414, Length=340, Percent_Identity=27.3529411764706, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI76496475, Length=396, Percent_Identity=26.5151515151515, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI4557235, Length=396, Percent_Identity=26.5151515151515, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI7669494, Length=331, Percent_Identity=27.7945619335347, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI4503943, Length=310, Percent_Identity=28.7096774193548, Blast_Score=99, Evalue=6e-21,
Organism=Escherichia coli, GI87081958, Length=402, Percent_Identity=28.6069651741293, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1786223, Length=324, Percent_Identity=25.9259259259259, Blast_Score=93, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17534899, Length=351, Percent_Identity=32.4786324786325, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17569725, Length=352, Percent_Identity=31.25, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17570075, Length=412, Percent_Identity=28.1553398058252, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17508101, Length=382, Percent_Identity=29.5811518324607, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17506239, Length=344, Percent_Identity=30.5232558139535, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17533517, Length=385, Percent_Identity=28.5714285714286, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17538396, Length=358, Percent_Identity=27.9329608938547, Blast_Score=135, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI71985184, Length=383, Percent_Identity=28.9817232375979, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17505929, Length=409, Percent_Identity=27.8728606356968, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI71990804, Length=264, Percent_Identity=32.5757575757576, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17562446, Length=336, Percent_Identity=27.9761904761905, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17551932, Length=297, Percent_Identity=27.6094276094276, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI32563615, Length=240, Percent_Identity=32.0833333333333, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71985192, Length=343, Percent_Identity=26.8221574344023, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17534353, Length=313, Percent_Identity=26.8370607028754, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71982178, Length=295, Percent_Identity=27.4576271186441, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17531909, Length=244, Percent_Identity=26.2295081967213, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24646207, Length=381, Percent_Identity=31.2335958005249, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI24660351, Length=394, Percent_Identity=29.9492385786802, Blast_Score=158, Evalue=6e-39,
Organism=Drosophila melanogaster, GI21356377, Length=379, Percent_Identity=29.287598944591, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI24666513, Length=344, Percent_Identity=31.3953488372093, Blast_Score=147, Evalue=9e-36,
Organism=Drosophila melanogaster, GI21355753, Length=347, Percent_Identity=30.5475504322767, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI281363737, Length=405, Percent_Identity=27.6543209876543, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI19920834, Length=199, Percent_Identity=36.6834170854271, Blast_Score=112, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 47043; Mature: 47043

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFTLPDHLPGVLAEMDAFIEAEIKPLEREHMQYFDRHREYARTDWENGGIPQRAWEDLL
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
DEMRRRADAAGWLRYGLPEQFGGRGGSNIDMAVIREHLAHKGLGLHNDLQDESSIVGNFP
HHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC
QVIMMDRFGTEQQKAEWIEAMLTGKRSMAFGLTEPNHGSDATWLETRAERDGDGWVINGT
CEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCEEEECC
KRWNTGVHRATHDLIFARTSGDPGQARGITAFLVPTDTPGFEVPYYWWTFNMPTDHGEVV
HHCCCCHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCEE
LTDVRVPDDAVLGEVDRGLEVGQTFLHENRIRQAASSLGAAQYCIDRAVEYAGQRTVFGK
EEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLAVNQAVQWPLVELQTEAQMVRLLVYYAATELDRSHHMEVSDKVSMANYRANRLVCEAA
CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHH
DRAMQVHGGVGYSRHEPFEHIYRHHRRYRITEGAEEIQIRRVAQRLFGFGRR
HHHHHHHCCCCCCCCCCHHHHHHHHHCEECCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDFTLPDHLPGVLAEMDAFIEAEIKPLEREHMQYFDRHREYARTDWENGGIPQRAWEDLL
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
DEMRRRADAAGWLRYGLPEQFGGRGGSNIDMAVIREHLAHKGLGLHNDLQDESSIVGNFP
HHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC
QVIMMDRFGTEQQKAEWIEAMLTGKRSMAFGLTEPNHGSDATWLETRAERDGDGWVINGT
CEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCEEEECC
KRWNTGVHRATHDLIFARTSGDPGQARGITAFLVPTDTPGFEVPYYWWTFNMPTDHGEVV
HHCCCCHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCEE
LTDVRVPDDAVLGEVDRGLEVGQTFLHENRIRQAASSLGAAQYCIDRAVEYAGQRTVFGK
EEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLAVNQAVQWPLVELQTEAQMVRLLVYYAATELDRSHHMEVSDKVSMANYRANRLVCEAA
CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHH
DRAMQVHGGVGYSRHEPFEHIYRHHRRYRITEGAEEIQIRRVAQRLFGFGRR
HHHHHHHCCCCCCCCCCHHHHHHHHHCEECCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]