| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is norB [H]
Identifier: 119867639
GI number: 119867639
Start: 1709866
End: 1712217
Strand: Reverse
Name: norB [H]
Synonym: Mkms_1593
Alternate gene names: 119867639
Gene position: 1712217-1709866 (Counterclockwise)
Preceding gene: 119867640
Following gene: 119867638
Centisome position: 29.84
GC content: 65.77
Gene sequence:
>2352_bases ATGGCGATCGACACCTCGGGCACGGTCGGCCGATCGGCCGGCGAGGAGAAGCAACCGGCGATCGGCAAGGGGTGGGTGCA GGCCGTCGCCCTCGTGATGATCTTCGGGTTCTTCATCATGGGCATCCTGGCTTACCGCACCTACACGGCCTCGATGCCCA TGCCGGACAGAGTGGTCGACGAATCCGGCCAGGAGTTGTTCACCGGGGCGGACATCACCCGCGGCCAGGAGTTGTTCCAG GCCCGGGGACTGATGCAGTACGGATCCGTACACGGGCACGGCGCCTACCTGGGGCCCGACTACACCGCCGACTATCTTCG CCGCGCCGCCGATGACGTCACCGCACAGTTCGAACGCGCCGGCGAAGCGCAGGTGCAGGAACGGGTGGTCGAGGAGTTCC GGACCAACCGCTTCGACGACCGCACGAAGACGCTCGTCTTCACCGATCGCCAGGCGGCGGCCTTCGACCGAATCCAGCAG CACTACGTCGCACACTTCGGCGCAGACGCCAGGAAGAACGGGCTGTCCCCCGATCTCATCACCGATCCGGAGGAGATCCG CGACCTGACCGCGTTCTTCGCCTGGAGCGCCTGGGCATCCGCAGCGGAGCGGCCGGGGCACAACTACACCTACACCAACA ACTGGCCCGCCGAGCCGCGGGTGGACAACGGCCCGACCGCGGATCTGATCGTGTGGTCGGCGCTGTCGCTGATCGCCCTA CTCGGCGGAACCGGCATACTGTTCGCGGTCTACGGCCGGTGGAGCCAGAGGATCGGCTGGCACGCCGAGGACGCTCCCGC CATCTCCTATCACCAGCCGGGTGAAGTGACGTTGACGCGATCGCAGCGGGCGACCGTGTGGTTCTTCGCCATCGTGTCGG TGCTCTTCCTCGCGCAGGCGCTGCTCGGCGCGCTCACCGAGCACTACCGGGCGGATCTGTCGTCGTTCTTCGGCCTCGAC CTGGCAAGATGGCTGCCCTACAACCTGGCCAGGACATGGCATGTGCAGTTGTCGCTGTTCTGGACCGCGGCAGCGTTTCT GGCCGGGGGCATCTTCCTCACGCCGTTCATCACGCGCCGGGAACCCAGGCGCCAACACTGGTTGGCCTACGGCCTGCTCG GCGCGGTGGCCCTGGTGGTGTTCGGCTCGCTGATCAGCGAGGCCCTGTCGATCTTCGGCGTCATCCCCGAGGGCACCTTG CTGTCCCAGCAGTGGGAGTATCTGGATCTGCCCCGGCTGTGGCAGATCCTGCTGATCGTCGGCCTGTTCCTGTGGATCGC GATCGTCTGGCGCGGACTGCGTTCCAGCTTGAAGACGTCGTCGAAGACGAGCATGCCGTGGATGTTCTTCTTCGCCGGGC TGGCGATCCCGGCGTTCTACGCGGTCGGCCTGCTGGCAGGCAGTGACACCCACTTCTCGGTCGCCGACTTCTGGCGCTTC TGGGTGGTGCACCTGTGGGTCGAGGACTTCCTCGAACTGTTCACCACCGTGATGGTCGCCTACATCTTCGTGCTGCTCGG CGTGGTCCGGCAACGCATCGCGCTCGGGATCATCTTCCTCGACATCATCCTGTACTCGGCCGGCGGCGTCATCGGCACGA TGCATCACCTGTACTTCTCCGGAACTCCGGTGGAGCACATGGCCCTCGGCGCGTTCTTCTCCGCGGCCGAGGTGATCCCG CTGACGTTCCTGACGGTCGAGGCGTGGACCTTCCTGCAGTTGGGGTCCCGCCAGCAGACCGGTGACACCAAACCGTTCCC ACACCGCTGGTCGGTGATGTTCCTGGTGGCGGTCGGCTTCTGGAACTTCCTGGGCGCCGGGGTGTTCGGCTTCCTCATCA ACCTGCCGATCGTGTCGTACTACCAGATCGGTACCGCGCTGACCGCCAATCACGCCCACGGGGCGATGATGGGCGTCTAC GGGATGCTGGCCGTCGGCATGGCGATGTTCGCGTTCCGCTACATCATCCCCGCCGACAAATGGCCGGAAAGGCTTGCCCG GCTCAGCTTCTGGTCGTTGAACATCGGGCTGGCCTGGATGGTGTTCGCCACCCTGCTGCCACTGGGGGTGCTGCAGCTCT ACCACTCGGTCAACGACGGCTACTTCGAGGCACGGTCGCTGGGCTACATCACCCAGCCCGGCAACGTCCTGCTGGAGTGG ATGCGCATGCCCGGCGACATCGTGTTCATCGGCGGCGGCATCCTGCCCCTGCTGTGGATCGCCTGGGTGGCGATCAAGAG CTTCTGGCAGGGCAGGAACACCGCCTACGTCGACGAGCTTCCCGACGAGCCGCTGTACACCGAACTGCCCGCGGCGGCGG GAGCCCGCAACGTCGGAGACACCACACCGTGA
Upstream 100 bases:
>100_bases ATCATGACCATCTACCGGGCCCGCCGGTCGGCCTCGGTCGACGACGCCAACCTACTCAAACACTGATCAGTTGCCGTTCA CACCAGGGGGTATGCGGAAC
Downstream 100 bases:
>100_bases GCCCTCCCGACATCGCGACGTGGCTGGTCGCGGGGTACGCACTGGCGCTGGTCCTCGTGGCGTGGGGCTTCGACCTGATG GCCAAGCGGGCCTCACACCG
Product: nitric-oxide reductase subunit B
Products: NA
Alternate protein names: NOR large subunit; Nitric oxide reductase cytochrome b subunit [H]
Number of amino acids: Translated: 783; Mature: 782
Protein sequence:
>783_residues MAIDTSGTVGRSAGEEKQPAIGKGWVQAVALVMIFGFFIMGILAYRTYTASMPMPDRVVDESGQELFTGADITRGQELFQ ARGLMQYGSVHGHGAYLGPDYTADYLRRAADDVTAQFERAGEAQVQERVVEEFRTNRFDDRTKTLVFTDRQAAAFDRIQQ HYVAHFGADARKNGLSPDLITDPEEIRDLTAFFAWSAWASAAERPGHNYTYTNNWPAEPRVDNGPTADLIVWSALSLIAL LGGTGILFAVYGRWSQRIGWHAEDAPAISYHQPGEVTLTRSQRATVWFFAIVSVLFLAQALLGALTEHYRADLSSFFGLD LARWLPYNLARTWHVQLSLFWTAAAFLAGGIFLTPFITRREPRRQHWLAYGLLGAVALVVFGSLISEALSIFGVIPEGTL LSQQWEYLDLPRLWQILLIVGLFLWIAIVWRGLRSSLKTSSKTSMPWMFFFAGLAIPAFYAVGLLAGSDTHFSVADFWRF WVVHLWVEDFLELFTTVMVAYIFVLLGVVRQRIALGIIFLDIILYSAGGVIGTMHHLYFSGTPVEHMALGAFFSAAEVIP LTFLTVEAWTFLQLGSRQQTGDTKPFPHRWSVMFLVAVGFWNFLGAGVFGFLINLPIVSYYQIGTALTANHAHGAMMGVY GMLAVGMAMFAFRYIIPADKWPERLARLSFWSLNIGLAWMVFATLLPLGVLQLYHSVNDGYFEARSLGYITQPGNVLLEW MRMPGDIVFIGGGILPLLWIAWVAIKSFWQGRNTAYVDELPDEPLYTELPAAAGARNVGDTTP
Sequences:
>Translated_783_residues MAIDTSGTVGRSAGEEKQPAIGKGWVQAVALVMIFGFFIMGILAYRTYTASMPMPDRVVDESGQELFTGADITRGQELFQ ARGLMQYGSVHGHGAYLGPDYTADYLRRAADDVTAQFERAGEAQVQERVVEEFRTNRFDDRTKTLVFTDRQAAAFDRIQQ HYVAHFGADARKNGLSPDLITDPEEIRDLTAFFAWSAWASAAERPGHNYTYTNNWPAEPRVDNGPTADLIVWSALSLIAL LGGTGILFAVYGRWSQRIGWHAEDAPAISYHQPGEVTLTRSQRATVWFFAIVSVLFLAQALLGALTEHYRADLSSFFGLD LARWLPYNLARTWHVQLSLFWTAAAFLAGGIFLTPFITRREPRRQHWLAYGLLGAVALVVFGSLISEALSIFGVIPEGTL LSQQWEYLDLPRLWQILLIVGLFLWIAIVWRGLRSSLKTSSKTSMPWMFFFAGLAIPAFYAVGLLAGSDTHFSVADFWRF WVVHLWVEDFLELFTTVMVAYIFVLLGVVRQRIALGIIFLDIILYSAGGVIGTMHHLYFSGTPVEHMALGAFFSAAEVIP LTFLTVEAWTFLQLGSRQQTGDTKPFPHRWSVMFLVAVGFWNFLGAGVFGFLINLPIVSYYQIGTALTANHAHGAMMGVY GMLAVGMAMFAFRYIIPADKWPERLARLSFWSLNIGLAWMVFATLLPLGVLQLYHSVNDGYFEARSLGYITQPGNVLLEW MRMPGDIVFIGGGILPLLWIAWVAIKSFWQGRNTAYVDELPDEPLYTELPAAAGARNVGDTTP >Mature_782_residues AIDTSGTVGRSAGEEKQPAIGKGWVQAVALVMIFGFFIMGILAYRTYTASMPMPDRVVDESGQELFTGADITRGQELFQA RGLMQYGSVHGHGAYLGPDYTADYLRRAADDVTAQFERAGEAQVQERVVEEFRTNRFDDRTKTLVFTDRQAAAFDRIQQH YVAHFGADARKNGLSPDLITDPEEIRDLTAFFAWSAWASAAERPGHNYTYTNNWPAEPRVDNGPTADLIVWSALSLIALL GGTGILFAVYGRWSQRIGWHAEDAPAISYHQPGEVTLTRSQRATVWFFAIVSVLFLAQALLGALTEHYRADLSSFFGLDL ARWLPYNLARTWHVQLSLFWTAAAFLAGGIFLTPFITRREPRRQHWLAYGLLGAVALVVFGSLISEALSIFGVIPEGTLL SQQWEYLDLPRLWQILLIVGLFLWIAIVWRGLRSSLKTSSKTSMPWMFFFAGLAIPAFYAVGLLAGSDTHFSVADFWRFW VVHLWVEDFLELFTTVMVAYIFVLLGVVRQRIALGIIFLDIILYSAGGVIGTMHHLYFSGTPVEHMALGAFFSAAEVIPL TFLTVEAWTFLQLGSRQQTGDTKPFPHRWSVMFLVAVGFWNFLGAGVFGFLINLPIVSYYQIGTALTANHAHGAMMGVYG MLAVGMAMFAFRYIIPADKWPERLARLSFWSLNIGLAWMVFATLLPLGVLQLYHSVNDGYFEARSLGYITQPGNVLLEWM RMPGDIVFIGGGILPLLWIAWVAIKSFWQGRNTAYVDELPDEPLYTELPAAAGARNVGDTTP
Specific function: Component of the anaerobic respiratory chain that transforms nitrate to dinitrogen (denitrification). NorB is the catalytic subunit of the enzyme complex. Shows proton pump activity across the membrane in denitrifying bacterial cells. The mononitrogen red
COG id: COG3256
COG function: function code P; Nitric oxide reductase large subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heme-copper respiratory oxidase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000883 [H]
Pfam domain/function: PF00115 COX1 [H]
EC number: =1.7.99.7 [H]
Molecular weight: Translated: 87408; Mature: 87277
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDTSGTVGRSAGEEKQPAIGKGWVQAVALVMIFGFFIMGILAYRTYTASMPMPDRVVD CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHC ESGQELFTGADITRGQELFQARGLMQYGSVHGHGAYLGPDYTADYLRRAADDVTAQFERA CCCCHHCCCCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GEAQVQERVVEEFRTNRFDDRTKTLVFTDRQAAAFDRIQQHYVAHFGADARKNGLSPDLI CHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC TDPEEIRDLTAFFAWSAWASAAERPGHNYTYTNNWPAEPRVDNGPTADLIVWSALSLIAL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LGGTGILFAVYGRWSQRIGWHAEDAPAISYHQPGEVTLTRSQRATVWFFAIVSVLFLAQA HCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH LLGALTEHYRADLSSFFGLDLARWLPYNLARTWHVQLSLFWTAAAFLAGGIFLTPFITRR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEHHHHHHHHHHHHCCHHHHHHHHCC EPRRQHWLAYGLLGAVALVVFGSLISEALSIFGVIPEGTLLSQQWEYLDLPRLWQILLIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHH GLFLWIAIVWRGLRSSLKTSSKTSMPWMFFFAGLAIPAFYAVGLLAGSDTHFSVADFWRF HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH WVVHLWVEDFLELFTTVMVAYIFVLLGVVRQRIALGIIFLDIILYSAGGVIGTMHHLYFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC GTPVEHMALGAFFSAAEVIPLTFLTVEAWTFLQLGSRQQTGDTKPFPHRWSVMFLVAVGF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH WNFLGAGVFGFLINLPIVSYYQIGTALTANHAHGAMMGVYGMLAVGMAMFAFRYIIPADK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH WPERLARLSFWSLNIGLAWMVFATLLPLGVLQLYHSVNDGYFEARSLGYITQPGNVLLEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEECCHHHHHHH MRMPGDIVFIGGGILPLLWIAWVAIKSFWQGRNTAYVDELPDEPLYTELPAAAGARNVGD HHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHCCCCCCCCCCCC TTP CCC >Mature Secondary Structure AIDTSGTVGRSAGEEKQPAIGKGWVQAVALVMIFGFFIMGILAYRTYTASMPMPDRVVD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHC ESGQELFTGADITRGQELFQARGLMQYGSVHGHGAYLGPDYTADYLRRAADDVTAQFERA CCCCHHCCCCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GEAQVQERVVEEFRTNRFDDRTKTLVFTDRQAAAFDRIQQHYVAHFGADARKNGLSPDLI CHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC TDPEEIRDLTAFFAWSAWASAAERPGHNYTYTNNWPAEPRVDNGPTADLIVWSALSLIAL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LGGTGILFAVYGRWSQRIGWHAEDAPAISYHQPGEVTLTRSQRATVWFFAIVSVLFLAQA HCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH LLGALTEHYRADLSSFFGLDLARWLPYNLARTWHVQLSLFWTAAAFLAGGIFLTPFITRR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEHHHHHHHHHHHHCCHHHHHHHHCC EPRRQHWLAYGLLGAVALVVFGSLISEALSIFGVIPEGTLLSQQWEYLDLPRLWQILLIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHH GLFLWIAIVWRGLRSSLKTSSKTSMPWMFFFAGLAIPAFYAVGLLAGSDTHFSVADFWRF HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH WVVHLWVEDFLELFTTVMVAYIFVLLGVVRQRIALGIIFLDIILYSAGGVIGTMHHLYFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC GTPVEHMALGAFFSAAEVIPLTFLTVEAWTFLQLGSRQQTGDTKPFPHRWSVMFLVAVGF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH WNFLGAGVFGFLINLPIVSYYQIGTALTANHAHGAMMGVYGMLAVGMAMFAFRYIIPADK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH WPERLARLSFWSLNIGLAWMVFATLLPLGVLQLYHSVNDGYFEARSLGYITQPGNVLLEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEECCHHHHHHH MRMPGDIVFIGGGILPLLWIAWVAIKSFWQGRNTAYVDELPDEPLYTELPAAAGARNVGD HHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHCCCCCCCCCCCC TTP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7508388; 2542222; 9521721 [H]