| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119867599
Identifier: 119867599
GI number: 119867599
Start: 1671076
End: 1672515
Strand: Direct
Name: 119867599
Synonym: Mkms_1552
Alternate gene names: NA
Gene position: 1671076-1672515 (Clockwise)
Preceding gene: 119867598
Following gene: 119867600
Centisome position: 29.13
GC content: 66.88
Gene sequence:
>1440_bases ATGCTGACCAGGCGAGTCAAACTACAGCTGGCAGTGTTCGCGCTCGTTGCGCTGATCGCCGGTGGGATCATGGCCTTCGG ATACGTCCGCGTGCCCGCGATGCTCGGAATCGGCCAGTACACGGTCACAGTCGAGCTTCCTCAGGCCGGCGGCCTCTACC AGACCGGCAACGTCACCTACCGCGGTACCAAGGTCGGTCGGGTCAGCGACGTCCGCCTGACCGACAACGGTGGTGTCGAG GCGGTGCTGTCGATGGACAGCTCCGTCGCCATCCCCTCGGACCTCGATGCGGAGGTGCACAGCACCTCCGCCATCGGCGA GCAGTACGTCGCACTGGTACCGCGGAGTGACGACGCGCCGCCGTTGAAGAACGGTGACGTGATCCCCGTCGACCGGGCCT CCGTGCCACCGCCCATCAACACACTCCTCGACGCAGCCAACAGCGGCATCCAGGCGATCCCACGCGACAACGTCAAGACG GTGATCGACGAGAGCTACACGGCGGTCGGACGATTGGGTCCGGAGCTGTCGCGCATCGTGCAGGGGTCCACCCGGTTGGC CGGCGACGCGCGTGCGAACCTGGACCCCATCCTCGCGCTGATCGACAAGGCGAAGCCCGTCATGGACTCGCAGGCCGAGA CCGCCGATTCGATCAATGCCTGGGCCTCTCACCTGGCGAATCTGACCGATCAGGTGCGCGACGCCGACCCGGGCGTGGCA GGCCTGCTCGAACGCGGCGCAGGTGCGGCCGAGGAGGCACGGCAGCTTTTCGACACGGTCAAGCCGACCCTGCCGGTGCT GCTGGCCAACCTGGTCAGTGTCGGTGAGGTCGCGGTGGTGTACCAGCCGGCCATCGAACAGGTGCTCGTGCTCGAACCGC AGCTCGTGGCGAGCCTGCAGGGCGCACTGCTCGCCAACAAGGACTCCCAGCGGTTCTCACCCGGCCTGTACGTGAGCTTC AATCTCAACCTGAACCTGCCGCCGCCATGTACGACCGGGTTCCTGCCGGTCGACCAGCAACTCGCCCCCAATGTCGAGAC TCCCGCCGATCCGGTAGCGGGCGATCTGTACTGCCGGATACCGAAGGACTCCTTCAACGTGGTGCGCGGCAACAGGAACT ACCCGTGCCTGAACCGGCCTGGCAAGCGGGCGCCGACGGCGAAGATGTGCGAGAGCGACGAGGAGTACGTACCGCTCAAC GACGGGATGAACTGGAAGGGCGACCCGAACGCGACCCTGTCCGGACAGGACATCCCGCAGCTGGCCCCGTCTCCCGATCC GGCGCCGGCCGCGCCGCCGCCGATAGCGGTCGCCGAATACGACCCGGCCACGGGGGAGTACCTCGGCCCTGACGGCAAGA TCTACACCCAGGCGGACCTGGGTTCCCAGACGGAAGGTAGGACATGGCAGAGCATGCTGATACCGCCGACGGCGGGCTGA
Upstream 100 bases:
>100_bases CTGGAGATGCAATGGGGCCGCACGATAGGACAGCTCCCCAGTCCGTACACCGCGCGCAACCCACTCGTCGCGCCCTACCA GGTGAATCAGGGGCCGTGAC
Downstream 100 bases:
>100_bases CCGAGTCGGATATGCCTGCGCCGCAGCGGCACAACGGGATACGGCTGGCCGTGGCGTTCAGCGTGGTGGCGATCGTGGGG CTGGGCGGCGTGGCCGGATG
Product: virulence factor Mce family protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family F; Mce Family F; MCE Family Protein; MCE-Family Protein; Mce-Family F; Mce Related Protein; Mce-Related Protein; MCE-Family; Mce Family
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MLTRRVKLQLAVFALVALIAGGIMAFGYVRVPAMLGIGQYTVTVELPQAGGLYQTGNVTYRGTKVGRVSDVRLTDNGGVE AVLSMDSSVAIPSDLDAEVHSTSAIGEQYVALVPRSDDAPPLKNGDVIPVDRASVPPPINTLLDAANSGIQAIPRDNVKT VIDESYTAVGRLGPELSRIVQGSTRLAGDARANLDPILALIDKAKPVMDSQAETADSINAWASHLANLTDQVRDADPGVA GLLERGAGAAEEARQLFDTVKPTLPVLLANLVSVGEVAVVYQPAIEQVLVLEPQLVASLQGALLANKDSQRFSPGLYVSF NLNLNLPPPCTTGFLPVDQQLAPNVETPADPVAGDLYCRIPKDSFNVVRGNRNYPCLNRPGKRAPTAKMCESDEEYVPLN DGMNWKGDPNATLSGQDIPQLAPSPDPAPAAPPPIAVAEYDPATGEYLGPDGKIYTQADLGSQTEGRTWQSMLIPPTAG
Sequences:
>Translated_479_residues MLTRRVKLQLAVFALVALIAGGIMAFGYVRVPAMLGIGQYTVTVELPQAGGLYQTGNVTYRGTKVGRVSDVRLTDNGGVE AVLSMDSSVAIPSDLDAEVHSTSAIGEQYVALVPRSDDAPPLKNGDVIPVDRASVPPPINTLLDAANSGIQAIPRDNVKT VIDESYTAVGRLGPELSRIVQGSTRLAGDARANLDPILALIDKAKPVMDSQAETADSINAWASHLANLTDQVRDADPGVA GLLERGAGAAEEARQLFDTVKPTLPVLLANLVSVGEVAVVYQPAIEQVLVLEPQLVASLQGALLANKDSQRFSPGLYVSF NLNLNLPPPCTTGFLPVDQQLAPNVETPADPVAGDLYCRIPKDSFNVVRGNRNYPCLNRPGKRAPTAKMCESDEEYVPLN DGMNWKGDPNATLSGQDIPQLAPSPDPAPAAPPPIAVAEYDPATGEYLGPDGKIYTQADLGSQTEGRTWQSMLIPPTAG >Mature_479_residues MLTRRVKLQLAVFALVALIAGGIMAFGYVRVPAMLGIGQYTVTVELPQAGGLYQTGNVTYRGTKVGRVSDVRLTDNGGVE AVLSMDSSVAIPSDLDAEVHSTSAIGEQYVALVPRSDDAPPLKNGDVIPVDRASVPPPINTLLDAANSGIQAIPRDNVKT VIDESYTAVGRLGPELSRIVQGSTRLAGDARANLDPILALIDKAKPVMDSQAETADSINAWASHLANLTDQVRDADPGVA GLLERGAGAAEEARQLFDTVKPTLPVLLANLVSVGEVAVVYQPAIEQVLVLEPQLVASLQGALLANKDSQRFSPGLYVSF NLNLNLPPPCTTGFLPVDQQLAPNVETPADPVAGDLYCRIPKDSFNVVRGNRNYPCLNRPGKRAPTAKMCESDEEYVPLN DGMNWKGDPNATLSGQDIPQLAPSPDPAPAAPPPIAVAEYDPATGEYLGPDGKIYTQADLGSQTEGRTWQSMLIPPTAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50578; Mature: 50578
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRRVKLQLAVFALVALIAGGIMAFGYVRVPAMLGIGQYTVTVELPQAGGLYQTGNVTY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEECCCEEE RGTKVGRVSDVRLTDNGGVEAVLSMDSSVAIPSDLDAEVHSTSAIGEQYVALVPRSDDAP ECCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCC PLKNGDVIPVDRASVPPPINTLLDAANSGIQAIPRDNVKTVIDESYTAVGRLGPELSRIV CCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH QGSTRLAGDARANLDPILALIDKAKPVMDSQAETADSINAWASHLANLTDQVRDADPGVA CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH GLLERGAGAAEEARQLFDTVKPTLPVLLANLVSVGEVAVVYQPAIEQVLVLEPQLVASLQ HHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEEEHHHHHHEECCCHHHHHHHH GALLANKDSQRFSPGLYVSFNLNLNLPPPCTTGFLPVDQQLAPNVETPADPVAGDLYCRI HHHEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEC PKDSFNVVRGNRNYPCLNRPGKRAPTAKMCESDEEYVPLNDGMNWKGDPNATLSGQDIPQ CCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCEECCCCCCCCCCCCCCEECCCCCCC LAPSPDPAPAAPPPIAVAEYDPATGEYLGPDGKIYTQADLGSQTEGRTWQSMLIPPTAG CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MLTRRVKLQLAVFALVALIAGGIMAFGYVRVPAMLGIGQYTVTVELPQAGGLYQTGNVTY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEECCCEEE RGTKVGRVSDVRLTDNGGVEAVLSMDSSVAIPSDLDAEVHSTSAIGEQYVALVPRSDDAP ECCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCC PLKNGDVIPVDRASVPPPINTLLDAANSGIQAIPRDNVKTVIDESYTAVGRLGPELSRIV CCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH QGSTRLAGDARANLDPILALIDKAKPVMDSQAETADSINAWASHLANLTDQVRDADPGVA CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH GLLERGAGAAEEARQLFDTVKPTLPVLLANLVSVGEVAVVYQPAIEQVLVLEPQLVASLQ HHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEEEHHHHHHEECCCHHHHHHHH GALLANKDSQRFSPGLYVSFNLNLNLPPPCTTGFLPVDQQLAPNVETPADPVAGDLYCRI HHHEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEC PKDSFNVVRGNRNYPCLNRPGKRAPTAKMCESDEEYVPLNDGMNWKGDPNATLSGQDIPQ CCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCEECCCCCCCCCCCCCCEECCCCCCC LAPSPDPAPAAPPPIAVAEYDPATGEYLGPDGKIYTQADLGSQTEGRTWQSMLIPPTAG CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA