Definition Mycobacterium sp. KMS chromosome, complete genome.
Accession NC_008705
Length 5,737,227

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The map label for this gene is 119867516

Identifier: 119867516

GI number: 119867516

Start: 1580119

End: 1581339

Strand: Reverse

Name: 119867516

Synonym: Mkms_1466

Alternate gene names: NA

Gene position: 1581339-1580119 (Counterclockwise)

Preceding gene: 119867517

Following gene: 119867515

Centisome position: 27.56

GC content: 63.39

Gene sequence:

>1221_bases
ATGCCGAAAGCCGCCTGTCCCCCGCCGTACCGAGTCACGCAGTGGCTGCGGACGGCCGCGATCGCGCTGGCCGTCGTGTT
CGTGGCGGCCGCCTGTGCGCCCTCCCCGTCTGCTGCCCCTCAAGCTGACGTCATCACTGAGAAGGGGACTCCGTTCGCCG
ACCTGCTCGTGCCGAAACTGCAGGCGTCGGTGACCGATGGGGCGATCGGCGTCTCCGTGGACGCCCCGGTCACGGTCTCT
GCCGGTGACGGCGTTCTTGGCCAGATATCGCTGATTAACGAAGCAGGAGAGCTGGTCGACGGGCAGCTCAGCCCAGACGG
TGTTTCTTGGGCCTCGGCCGAGCCGCTGGGTTACAACAAGCAGTACACGTTGCGGGCGGAAGCGCTCGGACTTGGTGGCG
CCACCAGCACGACAGCGACCTTCGAGACGCATTCCCCCGACAATCTGACGATGCCCTACGTCCTGCCCAATGACGGCGAA
ACCGTAGGTATCGGACAACCCATCGCTATTCGATTCGACGAGAACATCACCGATCGGCTGGCCGCACAGCGCGCCATTAC
GGTGACCACCACTCCTGCGGTGGAGGGCGCGTTCTACTGGCTCAGCAATCGTGAAGTGCGTTGGCGCCCAGCCGAGTACT
GGAAGCCCGGCACGACTGTCGAGGTCGACGTCAACGCCTACGGTGTCGACTTCGGTGACGGGCTTTTCGGCCAGGACGAC
GTCACCACGCGGTTCACTGTCGGCGACCAGATCATCGCGACCGCTGATGACGCCACCAAGACCATGACCGTGCGACGCAA
CGGTGAAGTCGTCAAGACCATGCCCATCTCCATGGGAAAGGCCAAGACGCCCACCGACAACGGCGTGTACATCATCGGCG
ACCGCTACTCGTTCCTGGTGATGGATTCCTCGACCTACGGCGTCCCGGTCAATTCACCGGACGGTTATCGAACCGAAGTC
GAATGGGCAACCCAGATGTCCTACAGCGGCATCTACGTCCACTCCGCACCCTGGTCGGTGGGCAGCCAAGGCGTCGCTAA
TGTCAGCCACGGGTGCCTCAACGTCAATCCCGCCAACGCCCGCTGGTTTTACGACAACACCCGACGCGGCGACATCGTGG
AAGTCATCAACACCACCGGGCCTACCCTGTCGGGAACCGACGGCCTCGGCGACTGGAACATCCCCTGGCAACAGTGGAAA
GCCGGCAACGCCAACCTGTAA

Upstream 100 bases:

>100_bases
CGAGTCGATGCGCTGACGCACCGACCGCCGACACTGGACCGCGCGACCTGACCACCACGACGACACCGGCAACACAGCGA
CACGAAAGACCTACACACCG

Downstream 100 bases:

>100_bases
TCCGACCTAATAGTCGCGCGCCAGTCTGCACCGGCACGCTGCGAGCCAGCGCTTCACCGACTCAGGTCGCGTAAGGAACC
TCTGATCAACCGTTGAGCGC

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MPKAACPPPYRVTQWLRTAAIALAVVFVAAACAPSPSAAPQADVITEKGTPFADLLVPKLQASVTDGAIGVSVDAPVTVS
AGDGVLGQISLINEAGELVDGQLSPDGVSWASAEPLGYNKQYTLRAEALGLGGATSTTATFETHSPDNLTMPYVLPNDGE
TVGIGQPIAIRFDENITDRLAAQRAITVTTTPAVEGAFYWLSNREVRWRPAEYWKPGTTVEVDVNAYGVDFGDGLFGQDD
VTTRFTVGDQIIATADDATKTMTVRRNGEVVKTMPISMGKAKTPTDNGVYIIGDRYSFLVMDSSTYGVPVNSPDGYRTEV
EWATQMSYSGIYVHSAPWSVGSQGVANVSHGCLNVNPANARWFYDNTRRGDIVEVINTTGPTLSGTDGLGDWNIPWQQWK
AGNANL

Sequences:

>Translated_406_residues
MPKAACPPPYRVTQWLRTAAIALAVVFVAAACAPSPSAAPQADVITEKGTPFADLLVPKLQASVTDGAIGVSVDAPVTVS
AGDGVLGQISLINEAGELVDGQLSPDGVSWASAEPLGYNKQYTLRAEALGLGGATSTTATFETHSPDNLTMPYVLPNDGE
TVGIGQPIAIRFDENITDRLAAQRAITVTTTPAVEGAFYWLSNREVRWRPAEYWKPGTTVEVDVNAYGVDFGDGLFGQDD
VTTRFTVGDQIIATADDATKTMTVRRNGEVVKTMPISMGKAKTPTDNGVYIIGDRYSFLVMDSSTYGVPVNSPDGYRTEV
EWATQMSYSGIYVHSAPWSVGSQGVANVSHGCLNVNPANARWFYDNTRRGDIVEVINTTGPTLSGTDGLGDWNIPWQQWK
AGNANL
>Mature_405_residues
PKAACPPPYRVTQWLRTAAIALAVVFVAAACAPSPSAAPQADVITEKGTPFADLLVPKLQASVTDGAIGVSVDAPVTVSA
GDGVLGQISLINEAGELVDGQLSPDGVSWASAEPLGYNKQYTLRAEALGLGGATSTTATFETHSPDNLTMPYVLPNDGET
VGIGQPIAIRFDENITDRLAAQRAITVTTTPAVEGAFYWLSNREVRWRPAEYWKPGTTVEVDVNAYGVDFGDGLFGQDDV
TTRFTVGDQIIATADDATKTMTVRRNGEVVKTMPISMGKAKTPTDNGVYIIGDRYSFLVMDSSTYGVPVNSPDGYRTEVE
WATQMSYSGIYVHSAPWSVGSQGVANVSHGCLNVNPANARWFYDNTRRGDIVEVINTTGPTLSGTDGLGDWNIPWQQWKA
GNANL

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 43260; Mature: 43128

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKAACPPPYRVTQWLRTAAIALAVVFVAAACAPSPSAAPQADVITEKGTPFADLLVPKL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHH
QASVTDGAIGVSVDAPVTVSAGDGVLGQISLINEAGELVDGQLSPDGVSWASAEPLGYNK
HCCCCCCEEEEEECCCEEEECCCCCEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCC
QYTLRAEALGLGGATSTTATFETHSPDNLTMPYVLPNDGETVGIGQPIAIRFDENITDRL
EEEEEEEEEECCCCCCCEEEEECCCCCCEEECEEECCCCCEEECCCCEEEEECCCHHHHH
AAQRAITVTTTPAVEGAFYWLSNREVRWRPAEYWKPGTTVEVDVNAYGVDFGDGLFGQDD
HHCEEEEEEECCCCCEEEEEECCCEEEECCHHHCCCCCEEEEEEEEEEEECCCCCCCCCC
VTTRFTVGDQIIATADDATKTMTVRRNGEVVKTMPISMGKAKTPTDNGVYIIGDRYSFLV
CEEEEEECCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEECCEEEEE
MDSSTYGVPVNSPDGYRTEVEWATQMSYSGIYVHSAPWSVGSQGVANVSHGCLNVNPANA
EECCCCCEECCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCCCCHHCCCEEECCCCCC
RWFYDNTRRGDIVEVINTTGPTLSGTDGLGDWNIPWQQWKAGNANL
EEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
PKAACPPPYRVTQWLRTAAIALAVVFVAAACAPSPSAAPQADVITEKGTPFADLLVPKL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHH
QASVTDGAIGVSVDAPVTVSAGDGVLGQISLINEAGELVDGQLSPDGVSWASAEPLGYNK
HCCCCCCEEEEEECCCEEEECCCCCEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCC
QYTLRAEALGLGGATSTTATFETHSPDNLTMPYVLPNDGETVGIGQPIAIRFDENITDRL
EEEEEEEEEECCCCCCCEEEEECCCCCCEEECEEECCCCCEEECCCCEEEEECCCHHHHH
AAQRAITVTTTPAVEGAFYWLSNREVRWRPAEYWKPGTTVEVDVNAYGVDFGDGLFGQDD
HHCEEEEEEECCCCCEEEEEECCCEEEECCHHHCCCCCEEEEEEEEEEEECCCCCCCCCC
VTTRFTVGDQIIATADDATKTMTVRRNGEVVKTMPISMGKAKTPTDNGVYIIGDRYSFLV
CEEEEEECCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEECCEEEEE
MDSSTYGVPVNSPDGYRTEVEWATQMSYSGIYVHSAPWSVGSQGVANVSHGCLNVNPANA
EECCCCCEECCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCCCCHHCCCEEECCCCCC
RWFYDNTRRGDIVEVINTTGPTLSGTDGLGDWNIPWQQWKAGNANL
EEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]