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The map label for this gene is intQ [C]

Identifier: 119867490

GI number: 119867490

Start: 1549290

End: 1550471

Strand: Reverse

Name: intQ [C]

Synonym: Mkms_1440

Alternate gene names: 119867490

Gene position: 1550471-1549290 (Counterclockwise)

Preceding gene: 119867491

Following gene: 119867489

Centisome position: 27.02

GC content: 60.41

Gene sequence:

>1182_bases
ATGCGGGAAGCCGATGAGGGTCGCGTCGTCCGACCATCCACGCGTACGGTGACTCAGTTTCTGGACGAATGGTTCACCGC
CGTTGAGGCATCACTCGACGCGACGACTTGGCAGAATTGGAAGGACTATGCGAAAAGCTACGTCGTGCCGCATATCGGGA
ACGTAAAGCTTCAGCAGCTCGATGAGCCAGAGCTGCTGCGGCTTTACGCGAAGTTGCTGACCGAAGGTCGGATCAAGCAA
GACCGAAACTACGAAATGTACTGCTATTGGCGTCGCCATGCGATCGACGGGGAGTCGCCGGCGCCGCGCGAAGTCGCTGA
CGCCTGCGGCACAACGATTCACGCCGCTCGCGCCGCTGTTCGGCGATACAAGAGCGGCATACTCCCGACAAAGATGGATC
CCGGACTTGCTCCAAAGACCGTTCGAAACATTCACGCCATGATCCATCGAGCGATGGCCGATGCCGTCGCGTGGAAGTAC
AAGGCTCACAATCCCGCGGCGAACGTACGGCCACCGAAGCGCTCCCGCTCCCGACGCACCGTGTGGAACCAAGAGGACAT
ACAGAAGTTCCTGCGCGCGGTCAGCCACGACCGGTTCGCATCGCTATTTCTTCTGGAGCTCACGACCGGCATACGTCGTG
GGCAGATCTGCGGCCTTCGATGGCACGACGTCGACCTGGACGTGCGCGAGGTTACGGTGCACGACAACCGAGTAGTAGTC
GCCGGGCATGCGAGAGACAAAGCCGGCGGCAAGACGCGAAATGCGGATCAGACCATTGCGATAGATCGAGTAACGGCGGC
AGCACTTCGAAAGTGGCGTGAGCATCAAAATGAAGAGCGGGCGTTCTTCGGTGCCGACTATCACCCTGGGAACTACGTCT
TCACGTTCGAGGATGGGCGGCCACCGCACCCCGACTCCATCCGCCAACGATTCGATCGCCTCGCGGCGGTCGCCGGCCTC
CCACGGATCACTTTTCACGATCTCCGACACTCATACGCGACAGCAGCCCTCAAGGCCGGGGTGAATCCCAAGATCGTGAG
CGAGCGTATCGGGCACGCGGACGTCGGTTTCTTTCTGCAAACCTACGCTCACGTCCTCAAGAATGACGACCGAGACGCTG
CCGAGCAGGCGGCAGCGTTCCTCATCGGAGATCAGTACGGATCGTCAGCCACCTCCGAGTGA

Upstream 100 bases:

>100_bases
CCGCGCAGCGGAGAAAGATCCATCGACCGGCCGATATCCCACGATCTCCAAGGGCGGCTTCTCGACTGAGAAGGAGGCTT
GGAAGGCCTGTCGGGATGCG

Downstream 100 bases:

>100_bases
GGCCCGCAACGTGCAGGATGTTGCGGCACTGGCCGGGAGCGACCCACAGGTCAGTAGCCCGACCGTCACAATTGACGATG
ATGGACGACCACGAACTTGA

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MREADEGRVVRPSTRTVTQFLDEWFTAVEASLDATTWQNWKDYAKSYVVPHIGNVKLQQLDEPELLRLYAKLLTEGRIKQ
DRNYEMYCYWRRHAIDGESPAPREVADACGTTIHAARAAVRRYKSGILPTKMDPGLAPKTVRNIHAMIHRAMADAVAWKY
KAHNPAANVRPPKRSRSRRTVWNQEDIQKFLRAVSHDRFASLFLLELTTGIRRGQICGLRWHDVDLDVREVTVHDNRVVV
AGHARDKAGGKTRNADQTIAIDRVTAAALRKWREHQNEERAFFGADYHPGNYVFTFEDGRPPHPDSIRQRFDRLAAVAGL
PRITFHDLRHSYATAALKAGVNPKIVSERIGHADVGFFLQTYAHVLKNDDRDAAEQAAAFLIGDQYGSSATSE

Sequences:

>Translated_393_residues
MREADEGRVVRPSTRTVTQFLDEWFTAVEASLDATTWQNWKDYAKSYVVPHIGNVKLQQLDEPELLRLYAKLLTEGRIKQ
DRNYEMYCYWRRHAIDGESPAPREVADACGTTIHAARAAVRRYKSGILPTKMDPGLAPKTVRNIHAMIHRAMADAVAWKY
KAHNPAANVRPPKRSRSRRTVWNQEDIQKFLRAVSHDRFASLFLLELTTGIRRGQICGLRWHDVDLDVREVTVHDNRVVV
AGHARDKAGGKTRNADQTIAIDRVTAAALRKWREHQNEERAFFGADYHPGNYVFTFEDGRPPHPDSIRQRFDRLAAVAGL
PRITFHDLRHSYATAALKAGVNPKIVSERIGHADVGFFLQTYAHVLKNDDRDAAEQAAAFLIGDQYGSSATSE
>Mature_393_residues
MREADEGRVVRPSTRTVTQFLDEWFTAVEASLDATTWQNWKDYAKSYVVPHIGNVKLQQLDEPELLRLYAKLLTEGRIKQ
DRNYEMYCYWRRHAIDGESPAPREVADACGTTIHAARAAVRRYKSGILPTKMDPGLAPKTVRNIHAMIHRAMADAVAWKY
KAHNPAANVRPPKRSRSRRTVWNQEDIQKFLRAVSHDRFASLFLLELTTGIRRGQICGLRWHDVDLDVREVTVHDNRVVV
AGHARDKAGGKTRNADQTIAIDRVTAAALRKWREHQNEERAFFGADYHPGNYVFTFEDGRPPHPDSIRQRFDRLAAVAGL
PRITFHDLRHSYATAALKAGVNPKIVSERIGHADVGFFLQTYAHVLKNDDRDAAEQAAAFLIGDQYGSSATSE

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44628; Mature: 44628

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREADEGRVVRPSTRTVTQFLDEWFTAVEASLDATTWQNWKDYAKSYVVPHIGNVKLQQL
CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
DEPELLRLYAKLLTEGRIKQDRNYEMYCYWRRHAIDGESPAPREVADACGTTIHAARAAV
CCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHCHHHHHHHHHH
RRYKSGILPTKMDPGLAPKTVRNIHAMIHRAMADAVAWKYKAHNPAANVRPPKRSRSRRT
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCC
VWNQEDIQKFLRAVSHDRFASLFLLELTTGIRRGQICGLRWHDVDLDVREVTVHDNRVVV
CCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEECEEEECCCCCEEEEEEECCEEEE
AGHARDKAGGKTRNADQTIAIDRVTAAALRKWREHQNEERAFFGADYHPGNYVFTFEDGR
EECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCC
PPHPDSIRQRFDRLAAVAGLPRITFHDLRHSYATAALKAGVNPKIVSERIGHADVGFFLQ
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHH
TYAHVLKNDDRDAAEQAAAFLIGDQYGSSATSE
HHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCC
>Mature Secondary Structure
MREADEGRVVRPSTRTVTQFLDEWFTAVEASLDATTWQNWKDYAKSYVVPHIGNVKLQQL
CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
DEPELLRLYAKLLTEGRIKQDRNYEMYCYWRRHAIDGESPAPREVADACGTTIHAARAAV
CCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHCHHHHHHHHHH
RRYKSGILPTKMDPGLAPKTVRNIHAMIHRAMADAVAWKYKAHNPAANVRPPKRSRSRRT
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCC
VWNQEDIQKFLRAVSHDRFASLFLLELTTGIRRGQICGLRWHDVDLDVREVTVHDNRVVV
CCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEECEEEECCCCCEEEEEEECCEEEE
AGHARDKAGGKTRNADQTIAIDRVTAAALRKWREHQNEERAFFGADYHPGNYVFTFEDGR
EECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCC
PPHPDSIRQRFDRLAAVAGLPRITFHDLRHSYATAALKAGVNPKIVSERIGHADVGFFLQ
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHH
TYAHVLKNDDRDAAEQAAAFLIGDQYGSSATSE
HHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]