| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867481
Identifier: 119867481
GI number: 119867481
Start: 1534484
End: 1535875
Strand: Reverse
Name: 119867481
Synonym: Mkms_1431
Alternate gene names: NA
Gene position: 1535875-1534484 (Counterclockwise)
Preceding gene: 119867486
Following gene: 119867480
Centisome position: 26.77
GC content: 70.26
Gene sequence:
>1392_bases ATGGCTGACCTGCCTTTCGGCTTCTCCTCGGGTGACGACCCGGAGCGAGACAAGAGCAAGAAGGACCCCGACGCGGGGTC CGGTCCTGGCGGTTCGCCGTCGGATCCGTTCGGCTCGATGTTCGGGCAGGGCGGCGCCGGCTTCGACATGTCCGACCTCG GCCAGATCTTCACCAAACTCGGTGAGATGTTCAGCGGCGCAGGCAATATGGCCGCCGGCGGAGCCCAGTCCGGACCGGTC AACTACGACCTCGCCCGGCAGCTCGCGTCGAGCGCGATCGGGTTCGTCGCACCGGTGCCCGACCAGACCAAGTCGGCGAT CGCCGACGCGGTGCATCTCGCCGAAACCTGGCTCGACGGCGTCACCCCGCTGCCGGCGGGCACCACCCGCGCGGTCGCCT GGACCCCGAGCGACTGGATCGACCACACGTTGGACACCTGGAAGCGGCTGTGCGATCCGGTCGCCGAGCAGATCTCGACG GTGTGGGCCTCGGCGCTGCCCGAGGAGGCCCGCGCGATGGCCGGTCCGCTGATGGCGATGATGTCGCAGATGGGCGGCAT GGCGTTCGGTTCCCAACTCGGCCAGGCCCTGGGCAAGCTGTCCAAGGAGGTGCTGACCTCCACCGACATCGGCCTGCCGC TCGGCCCGAAGGGTGTCGCCGCGCTGCTGCCCGAGGCGGTCGAGGCGTTCTCGGAGGGTCTCGAGCAGCCGCGCAGCGAG GTGCTGACGTTCCTCGCCGCGCGGGAAGCCGCGCACCATCGGCTGTTCAGCCATGTGCCGTGGCTGTCGAGCCAGTTGCT GTCCGCGGTCGAGGCGTTCGCACGCGGCATGAAGGTCGACATGAGCGGTATCGAGGATCTGGCCCAGGGCATCAACCCGG CCGCGCTGACCGATCCGTCGCAGATGGAGCAGCTGCTCAACCAGGGCATCTTCGAGCCCAAGGCCACCCCGGAGCAGGTC GCGGCACTCGAACGGCTCGAGACCCTGCTCGCGCTCATCGAGGGTTGGGTGCAGACCGTGGTCACCTCCGCGCTCGGCGA CCGCATCCCCGGCACCGGCGCCCTGTCGGAGACGCTGCGGCGGCGCCGGGCCACCGGCGGGCCGGCCGAGCAGACGTTCG CCACGCTGGTCGGGCTCGAACTGCGGCCGCGCAAAATGCGCGAGGCCGCGGTGCTGTGGGAGCGGCTCACCGAGGCGGTC GGCGCCGACGCCCGAGACGGTGTGTGGCAGCACCCGGATCTGCTGCCGTCGTCAGAGGACCTCGACGAACCCGCCGCGTT CATCGACCGGATGGTCGGCGGCGACACCAGCGGGATGGACAGCGCCATCGAAGAGGCCTTCACCGACCTCGACAAGGGTT CGGACGACCGCCCCGAGGACGATCAGCGCTAG
Upstream 100 bases:
>100_bases CCTGTTCACGCCGCCCACAGTAAGGGAGCGCCGCGCCCGTTCACTGACAGCGTGACCGGGCACACCGCACCACCCGGCGC CGGTGAGTACCGTTGACGGC
Downstream 100 bases:
>100_bases TTGTCCACAGGCCTGTGGATGAGTGCGGGGTGACGCCGTCGCTGCGTGGCAGAGTCCTTCCATGTCCACCTACCGGCTCA GGGAGGCGCTGCCCGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MADLPFGFSSGDDPERDKSKKDPDAGSGPGGSPSDPFGSMFGQGGAGFDMSDLGQIFTKLGEMFSGAGNMAAGGAQSGPV NYDLARQLASSAIGFVAPVPDQTKSAIADAVHLAETWLDGVTPLPAGTTRAVAWTPSDWIDHTLDTWKRLCDPVAEQIST VWASALPEEARAMAGPLMAMMSQMGGMAFGSQLGQALGKLSKEVLTSTDIGLPLGPKGVAALLPEAVEAFSEGLEQPRSE VLTFLAAREAAHHRLFSHVPWLSSQLLSAVEAFARGMKVDMSGIEDLAQGINPAALTDPSQMEQLLNQGIFEPKATPEQV AALERLETLLALIEGWVQTVVTSALGDRIPGTGALSETLRRRRATGGPAEQTFATLVGLELRPRKMREAAVLWERLTEAV GADARDGVWQHPDLLPSSEDLDEPAAFIDRMVGGDTSGMDSAIEEAFTDLDKGSDDRPEDDQR
Sequences:
>Translated_463_residues MADLPFGFSSGDDPERDKSKKDPDAGSGPGGSPSDPFGSMFGQGGAGFDMSDLGQIFTKLGEMFSGAGNMAAGGAQSGPV NYDLARQLASSAIGFVAPVPDQTKSAIADAVHLAETWLDGVTPLPAGTTRAVAWTPSDWIDHTLDTWKRLCDPVAEQIST VWASALPEEARAMAGPLMAMMSQMGGMAFGSQLGQALGKLSKEVLTSTDIGLPLGPKGVAALLPEAVEAFSEGLEQPRSE VLTFLAAREAAHHRLFSHVPWLSSQLLSAVEAFARGMKVDMSGIEDLAQGINPAALTDPSQMEQLLNQGIFEPKATPEQV AALERLETLLALIEGWVQTVVTSALGDRIPGTGALSETLRRRRATGGPAEQTFATLVGLELRPRKMREAAVLWERLTEAV GADARDGVWQHPDLLPSSEDLDEPAAFIDRMVGGDTSGMDSAIEEAFTDLDKGSDDRPEDDQR >Mature_462_residues ADLPFGFSSGDDPERDKSKKDPDAGSGPGGSPSDPFGSMFGQGGAGFDMSDLGQIFTKLGEMFSGAGNMAAGGAQSGPVN YDLARQLASSAIGFVAPVPDQTKSAIADAVHLAETWLDGVTPLPAGTTRAVAWTPSDWIDHTLDTWKRLCDPVAEQISTV WASALPEEARAMAGPLMAMMSQMGGMAFGSQLGQALGKLSKEVLTSTDIGLPLGPKGVAALLPEAVEAFSEGLEQPRSEV LTFLAAREAAHHRLFSHVPWLSSQLLSAVEAFARGMKVDMSGIEDLAQGINPAALTDPSQMEQLLNQGIFEPKATPEQVA ALERLETLLALIEGWVQTVVTSALGDRIPGTGALSETLRRRRATGGPAEQTFATLVGLELRPRKMREAAVLWERLTEAVG ADARDGVWQHPDLLPSSEDLDEPAAFIDRMVGGDTSGMDSAIEEAFTDLDKGSDDRPEDDQR
Specific function: Unknown
COG id: COG5282
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48969; Mature: 48838
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLPFGFSSGDDPERDKSKKDPDAGSGPGGSPSDPFGSMFGQGGAGFDMSDLGQIFTKL CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH GEMFSGAGNMAAGGAQSGPVNYDLARQLASSAIGFVAPVPDQTKSAIADAVHLAETWLDG HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC VTPLPAGTTRAVAWTPSDWIDHTLDTWKRLCDPVAEQISTVWASALPEEARAMAGPLMAM CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH MSQMGGMAFGSQLGQALGKLSKEVLTSTDIGLPLGPKGVAALLPEAVEAFSEGLEQPRSE HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VLTFLAAREAAHHRLFSHVPWLSSQLLSAVEAFARGMKVDMSGIEDLAQGINPAALTDPS HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHH QMEQLLNQGIFEPKATPEQVAALERLETLLALIEGWVQTVVTSALGDRIPGTGALSETLR HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH RRRATGGPAEQTFATLVGLELRPRKMREAAVLWERLTEAVGADARDGVWQHPDLLPSSED HHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC LDEPAAFIDRMVGGDTSGMDSAIEEAFTDLDKGSDDRPEDDQR CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ADLPFGFSSGDDPERDKSKKDPDAGSGPGGSPSDPFGSMFGQGGAGFDMSDLGQIFTKL CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH GEMFSGAGNMAAGGAQSGPVNYDLARQLASSAIGFVAPVPDQTKSAIADAVHLAETWLDG HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC VTPLPAGTTRAVAWTPSDWIDHTLDTWKRLCDPVAEQISTVWASALPEEARAMAGPLMAM CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH MSQMGGMAFGSQLGQALGKLSKEVLTSTDIGLPLGPKGVAALLPEAVEAFSEGLEQPRSE HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VLTFLAAREAAHHRLFSHVPWLSSQLLSAVEAFARGMKVDMSGIEDLAQGINPAALTDPS HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHH QMEQLLNQGIFEPKATPEQVAALERLETLLALIEGWVQTVVTSALGDRIPGTGALSETLR HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH RRRATGGPAEQTFATLVGLELRPRKMREAAVLWERLTEAVGADARDGVWQHPDLLPSSED HHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC LDEPAAFIDRMVGGDTSGMDSAIEEAFTDLDKGSDDRPEDDQR CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA