Definition Mycobacterium sp. KMS chromosome, complete genome.
Accession NC_008705
Length 5,737,227

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The map label for this gene is xylY [H]

Identifier: 119867440

GI number: 119867440

Start: 1493940

End: 1494461

Strand: Reverse

Name: xylY [H]

Synonym: Mkms_1390

Alternate gene names: 119867440

Gene position: 1494461-1493940 (Counterclockwise)

Preceding gene: 119867441

Following gene: 119867439

Centisome position: 26.05

GC content: 60.15

Gene sequence:

>522_bases
ATGTCCAGCCAAACCACCTCAGCCGCAGCCACACTCATCACCCAGAACATGATCGAGCAGTTCCTCTACCGGGAGGCCCG
CTACCTCGACGACCGCGAGTTCGAGAAGTGGCTGGGCTGCTACGCCGACGACGTCGTCTACTGGATGCCGTCGTGGGCCG
ACGACGACACGCTGGTGGAGGATCCGCAGCGGGACATCTCGCTGGTCTACTACGCGAACAAGGGTGGCCTCGAAGACCGC
GTCTTCCGAATCCGCACCGAACGCTCCTCGGCCACGTCACTTCCCGAACCACGCACCAGCCACAACATCAGCAACGTCGA
GGTCATCGAACGCCGCGGCGACCTGGTGGACGTCCGGTTCAACTGGCACACCATGTATTTCCGGTACAAGACGATCGACC
CGTATTACGGCACCTCCTTCTACACCATCGACTTCTCCGGTGATCATCCGCTGATCCGTCGAAAGACCGTGGTGCTCAAG
AACGACTACATCCACCACGTCGTGGACATCTACCACTTCTAG

Upstream 100 bases:

>100_bases
GCAACGAGGACGAGGGCCTCTACCCCGTCCAGCACGGCTACTGGCTGCAGACCATGCGTGCGGCGCTGGCCCAAAACGAG
ACCGGATCGGAGAAGTGACC

Downstream 100 bases:

>100_bases
AAGGCCACGCCATGACATCCACCGAATCCCGCATTCACCAGGTCGCCCTGTCTTTCGAGGACGGCGTGACCCGGTTCATC
AGCTGCCGCGACGACCAGAC

Product: 2-chlorobenzoate 1,2-dioxygenase

Products: 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate; NAD+

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MSSQTTSAAATLITQNMIEQFLYREARYLDDREFEKWLGCYADDVVYWMPSWADDDTLVEDPQRDISLVYYANKGGLEDR
VFRIRTERSSATSLPEPRTSHNISNVEVIERRGDLVDVRFNWHTMYFRYKTIDPYYGTSFYTIDFSGDHPLIRRKTVVLK
NDYIHHVVDIYHF

Sequences:

>Translated_173_residues
MSSQTTSAAATLITQNMIEQFLYREARYLDDREFEKWLGCYADDVVYWMPSWADDDTLVEDPQRDISLVYYANKGGLEDR
VFRIRTERSSATSLPEPRTSHNISNVEVIERRGDLVDVRFNWHTMYFRYKTIDPYYGTSFYTIDFSGDHPLIRRKTVVLK
NDYIHHVVDIYHF
>Mature_172_residues
SSQTTSAAATLITQNMIEQFLYREARYLDDREFEKWLGCYADDVVYWMPSWADDDTLVEDPQRDISLVYYANKGGLEDRV
FRIRTERSSATSLPEPRTSHNISNVEVIERRGDLVDVRFNWHTMYFRYKTIDPYYGTSFYTIDFSGDHPLIRRKTVVLKN
DYIHHVVDIYHF

Specific function: Part Of The Multicomponent 3-Phenylpropionate Dioxygenase. Converts 3-Phenylpropionic Acid (Pp) Into Cis-3-(3- Carboxyethyl)-3,5-Cyclohexadiene-1,2-Diol (Pp-Dihydrodiol). [C]

COG id: COG5517

COG function: function code Q; Small subunit of phenylpropionate dioxygenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017641
- InterPro:   IPR000391 [H]

Pfam domain/function: PF00866 Ring_hydroxyl_B [H]

EC number: 1.14.12.10

Molecular weight: Translated: 20572; Mature: 20441

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQTTSAAATLITQNMIEQFLYREARYLDDREFEKWLGCYADDVVYWMPSWADDDTLVE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCC
DPQRDISLVYYANKGGLEDRVFRIRTERSSATSLPEPRTSHNISNVEVIERRGDLVDVRF
CCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEE
NWHTMYFRYKTIDPYYGTSFYTIDFSGDHPLIRRKTVVLKNDYIHHVVDIYHF
EEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEEECCHHHHHHHHHCC
>Mature Secondary Structure 
SSQTTSAAATLITQNMIEQFLYREARYLDDREFEKWLGCYADDVVYWMPSWADDDTLVE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCC
DPQRDISLVYYANKGGLEDRVFRIRTERSSATSLPEPRTSHNISNVEVIERRGDLVDVRF
CCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEE
NWHTMYFRYKTIDPYYGTSFYTIDFSGDHPLIRRKTVVLKNDYIHHVVDIYHF
EEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: benzoate; NADH; H+; O2

Specific reaction: benzoate + NADH + H+ + O2 = 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate + NAD+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938949 [H]