| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119867389
Identifier: 119867389
GI number: 119867389
Start: 1433811
End: 1434365
Strand: Reverse
Name: 119867389
Synonym: Mkms_1339
Alternate gene names: NA
Gene position: 1434365-1433811 (Counterclockwise)
Preceding gene: 119867390
Following gene: 119867385
Centisome position: 25.0
GC content: 71.89
Gene sequence:
>555_bases GTGAGCCTGCACGCATCGGCGGTCGACATCCTGACCGACTGGGTCGCCCCCGACCCGGCGCAGGATTCGTTGCGTCACGC CGTGATCGCATTCCTCGCCGCACGACCCGACGGATGCCTGCGCGCCTGTGTGCCCGGCCACGTCACCGCCTCGGCGCTGG TGCTCGACCATGCCGGCACCCACGCGGTGCTGACGCTGCACCCACGGTTCGGCCGCTGGCTGCAGTTGGGCGGACACTGT GAACCCGACGACCCGGACATCGTCGCCGCCGCGCTGCGTGAGGCCGCCGAGGAATCCGGCATCGACGGGCTGGTCATCGA CCCCCGGCTCGCGACCGTGCACGTTCATCCGGTGACCTGCTCGCTGGGCGTGCCGACACGTCACCTCGATCTGCAGTTCC TCGTGCGCGCACCGGAGGGGGCGCAGATCGCGCGCTCGGACGAGTCGCTGGATCTGCGGTGGTGGCCGCTCGACGCGCTG CCCCCGGACACGGACTTCGGGTTGGCGCAGCTGGCCGCCGAGGCGCGACGCCGCGGTCAGACGTCGGTCGAGTAG
Upstream 100 bases:
>100_bases CCGCCGAGTGGGAACCGTTGGGCGCCGTCGCGGTCGGCCACCCCGCCGAGCCGCAGGGCCCCCGTGATCCTGTTCTGCCA GAAGGGCTCCTGGTGCGCCG
Downstream 100 bases:
>100_bases CGGATGCCGCCGTCGGGGATCTTCACTCCCGGCCACACCCGCGCCCCACGCAACAACTCACAGCGCGCGCCGATGTCGGC GCCGTCGCCGATGACCGCGT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Nudix Hydrolase; Nudix Family Hydrolase; Hydrolase Nudix Family Protein; NUDIX Family Protein; LOW QUALITY PROTEIN NUDIX Hydrolase; Nudix Hydrolase Family Protein; ADP-Ribose Pyrophosphatase; Nudix Superfamily Hydrolase; NTP Pyrophosphohydrolase; (Di)Nucleoside Polyphosphate Hydrolase; (Di)Nucleoside Polyphosphate Hydrolase-Like Protein
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSLHASAVDILTDWVAPDPAQDSLRHAVIAFLAARPDGCLRACVPGHVTASALVLDHAGTHAVLTLHPRFGRWLQLGGHC EPDDPDIVAAALREAAEESGIDGLVIDPRLATVHVHPVTCSLGVPTRHLDLQFLVRAPEGAQIARSDESLDLRWWPLDAL PPDTDFGLAQLAAEARRRGQTSVE
Sequences:
>Translated_184_residues MSLHASAVDILTDWVAPDPAQDSLRHAVIAFLAARPDGCLRACVPGHVTASALVLDHAGTHAVLTLHPRFGRWLQLGGHC EPDDPDIVAAALREAAEESGIDGLVIDPRLATVHVHPVTCSLGVPTRHLDLQFLVRAPEGAQIARSDESLDLRWWPLDAL PPDTDFGLAQLAAEARRRGQTSVE >Mature_183_residues SLHASAVDILTDWVAPDPAQDSLRHAVIAFLAARPDGCLRACVPGHVTASALVLDHAGTHAVLTLHPRFGRWLQLGGHCE PDDPDIVAAALREAAEESGIDGLVIDPRLATVHVHPVTCSLGVPTRHLDLQFLVRAPEGAQIARSDESLDLRWWPLDALP PDTDFGLAQLAAEARRRGQTSVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19751; Mature: 19619
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHASAVDILTDWVAPDPAQDSLRHAVIAFLAARPDGCLRACVPGHVTASALVLDHAGT CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECCCC HAVLTLHPRFGRWLQLGGHCEPDDPDIVAAALREAAEESGIDGLVIDPRLATVHVHPVTC EEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCEEEEEEEEEEEE SLGVPTRHLDLQFLVRAPEGAQIARSDESLDLRWWPLDALPPDTDFGLAQLAAEARRRGQ ECCCCCCCCCEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCC TSVE CCCC >Mature Secondary Structure SLHASAVDILTDWVAPDPAQDSLRHAVIAFLAARPDGCLRACVPGHVTASALVLDHAGT CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECCCC HAVLTLHPRFGRWLQLGGHCEPDDPDIVAAALREAAEESGIDGLVIDPRLATVHVHPVTC EEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCEEEEEEEEEEEE SLGVPTRHLDLQFLVRAPEGAQIARSDESLDLRWWPLDALPPDTDFGLAQLAAEARRRGQ ECCCCCCCCCEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCC TSVE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA