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The map label for this gene is ybfF [C]

Identifier: 119867370

GI number: 119867370

Start: 1412776

End: 1413573

Strand: Reverse

Name: ybfF [C]

Synonym: Mkms_1320

Alternate gene names: 119867370

Gene position: 1413573-1412776 (Counterclockwise)

Preceding gene: 119867371

Following gene: 119867369

Centisome position: 24.64

GC content: 67.17

Gene sequence:

>798_bases
ATGACAGACACGCTCGTTCGCGACCACGTCGGCACCGCGGTCCGCGTCGGACAGGTGCACATCGTGTTGCCGGCCTACAA
CGAAGAAGGATCCCTGCGCCCACTCCTCGAGCGCATCGACCGCCTGGCCGCGTCTCAACCGCTCACCGTCTGGGTGATCG
ATGACGGTTCCGCGGACAGGACCGCCGCGGTCGCCGCGAGCGGTCCCGCGGGTCTCGATGTCAACGTGGTGACCCACGAG
GTGAACCTCGGCCTCGGACAGGCCATTCAGACGGGCCTGCGGTCGGTCCTCGCGGTCGCCGCCGACGACGACGTGCTCGT
GGTGATGGACGCCGACGACACCCACGACCCGACTCTCGTCGCCGCGCTGGTCGACGAGATCGACAAGGGTGCCGACATCG
CCATCTGCTCACGGTTCACCGACGGAGGTGACGACACCACGGCCCCGCCCCTGCGGCGACTGATGTCGCGGGGGGCGGCG
CACATGTTCCGCGTGGTCGCGAAGGTCGACGGTGTCCGCGATTTCACCAGCGGTTATCGCGCATACCGGGTTTCGCTGCT
GCGCCGTGCCACCGGCCACTGGGGTGAACGGCTCGTCGTCGAGCAGGGCTTCGCCTGCATGGTGGAACTCCTCCTCAAGC
TGCGGCACTGCAATCCGCGCATCGCCGAGGTGCCGCTGGTCCTGCAGTACGACCGCAAGCACGGTGCGAGCAAGCTGAAG
TTGGCACGCACGCTCAAGCAGTACTTCAAACTGCTTGTCCGTGAGTCCTTCACACCCGCGCCCTACCGGCAGGTCTAG

Upstream 100 bases:

>100_bases
CCGAGTCCACGAGGACACCACGACCCATCCGCGCGCCTGCGCCCGGCAGACCACCCGCACCGTCACGTCCACGCGTGGCG
CCGAACACCGAAGGATCCCC

Downstream 100 bases:

>100_bases
ATGTCCACACCGGTCGAGCCGGGGCCCGTCGTGGTCATCGGCGGCGGGATATCGGGTCTGACGGCGGCCTACCGGCTGGC
CCGCGCGTCGATTCCGGTCC

Product: glycosyl transferase family protein

Products: GDP; dolichyl D-mannosyl phosphate

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MTDTLVRDHVGTAVRVGQVHIVLPAYNEEGSLRPLLERIDRLAASQPLTVWVIDDGSADRTAAVAASGPAGLDVNVVTHE
VNLGLGQAIQTGLRSVLAVAADDDVLVVMDADDTHDPTLVAALVDEIDKGADIAICSRFTDGGDDTTAPPLRRLMSRGAA
HMFRVVAKVDGVRDFTSGYRAYRVSLLRRATGHWGERLVVEQGFACMVELLLKLRHCNPRIAEVPLVLQYDRKHGASKLK
LARTLKQYFKLLVRESFTPAPYRQV

Sequences:

>Translated_265_residues
MTDTLVRDHVGTAVRVGQVHIVLPAYNEEGSLRPLLERIDRLAASQPLTVWVIDDGSADRTAAVAASGPAGLDVNVVTHE
VNLGLGQAIQTGLRSVLAVAADDDVLVVMDADDTHDPTLVAALVDEIDKGADIAICSRFTDGGDDTTAPPLRRLMSRGAA
HMFRVVAKVDGVRDFTSGYRAYRVSLLRRATGHWGERLVVEQGFACMVELLLKLRHCNPRIAEVPLVLQYDRKHGASKLK
LARTLKQYFKLLVRESFTPAPYRQV
>Mature_264_residues
TDTLVRDHVGTAVRVGQVHIVLPAYNEEGSLRPLLERIDRLAASQPLTVWVIDDGSADRTAAVAASGPAGLDVNVVTHEV
NLGLGQAIQTGLRSVLAVAADDDVLVVMDADDTHDPTLVAALVDEIDKGADIAICSRFTDGGDDTTAPPLRRLMSRGAAH
MFRVVAKVDGVRDFTSGYRAYRVSLLRRATGHWGERLVVEQGFACMVELLLKLRHCNPRIAEVPLVLQYDRKHGASKLKL
ARTLKQYFKLLVRESFTPAPYRQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=235, Percent_Identity=29.3617021276596, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI71999402, Length=226, Percent_Identity=28.3185840707965, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24585265, Length=225, Percent_Identity=30.6666666666667, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.83

Molecular weight: Translated: 28955; Mature: 28823

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTLVRDHVGTAVRVGQVHIVLPAYNEEGSLRPLLERIDRLAASQPLTVWVIDDGSADR
CCCCHHHHHCCCEEEECEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCC
TAAVAASGPAGLDVNVVTHEVNLGLGQAIQTGLRSVLAVAADDDVLVVMDADDTHDPTLV
EEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
AALVDEIDKGADIAICSRFTDGGDDTTAPPLRRLMSRGAAHMFRVVAKVDGVRDFTSGYR
HHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHH
AYRVSLLRRATGHWGERLVVEQGFACMVELLLKLRHCNPRIAEVPLVLQYDRKHGASKLK
HHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCHHHHH
LARTLKQYFKLLVRESFTPAPYRQV
HHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TDTLVRDHVGTAVRVGQVHIVLPAYNEEGSLRPLLERIDRLAASQPLTVWVIDDGSADR
CCCHHHHHCCCEEEECEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCC
TAAVAASGPAGLDVNVVTHEVNLGLGQAIQTGLRSVLAVAADDDVLVVMDADDTHDPTLV
EEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
AALVDEIDKGADIAICSRFTDGGDDTTAPPLRRLMSRGAAHMFRVVAKVDGVRDFTSGYR
HHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHH
AYRVSLLRRATGHWGERLVVEQGFACMVELLLKLRHCNPRIAEVPLVLQYDRKHGASKLK
HHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCHHHHH
LARTLKQYFKLLVRESFTPAPYRQV
HHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDPmannose; dolichyl phosphate

Specific reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]