| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867369
Identifier: 119867369
GI number: 119867369
Start: 1411438
End: 1412775
Strand: Reverse
Name: 119867369
Synonym: Mkms_1319
Alternate gene names: NA
Gene position: 1412775-1411438 (Counterclockwise)
Preceding gene: 119867370
Following gene: 119867368
Centisome position: 24.62
GC content: 68.39
Gene sequence:
>1338_bases ATGTCCACACCGGTCGAGCCGGGGCCCGTCGTGGTCATCGGCGGCGGGATATCGGGTCTGACGGCGGCCTACCGGCTGGC CCGCGCGTCGATTCCGGTCCGCCTCGTCGAAAGTGCCGGACAGCTCGGCGGATTGGGTATAGGTGGCGAGATCGGCGGCG TCGAGATCGAACGCTTCTACCACTGTGTGATGCCCACCGACGAACATCTCCTTCCCCTGCTCGAGGAGCTCGGGCTCGCC GCGGACATCGGCTGGCAGCAGACGACGATGGGTATGAACATCGACGGCCGCCGATATCCCTTCAACAGCGCCGTGGACCT GCTGCGGTTCACCCCGCTGCGGTTCACCCAGCGGATCCGGTTCGGAGCGGTCTCGCTGCTGTTGCGCCGGCTCGGGCGCG GGAAGGACCTCGACAACACCAGAACCGAGGACTGGCTGCGCGGCGTGTACGGCCCCACCGTGTGGCAGCGCCTGCTCAGA CCGTTGTTCGGCGCGAAGTTCGGTGACGCCTTCGGTGAGGTCCCCGCCCGCTACCTCTATCAGCGCCTCGGCCGGGAGAG CAACGTCGCCACCCGCGGCTATCCGCTGGGTACGTACCGCTCGATCGTCGACCGCTTGAGGGAGTCCATCGAATCCGACG GCGGACGTGTCGATTTGGGCGTGGGGGTGCAGAGCGTGACGGCCGACGGCGACGGCGCGACCGTTCGTCTGGACACCGGC GAGGAGATCGCCGCGCAATCGGTCGTGTCGACGGTGCCGATCCCGCTGCTGCGCTCGCTGTCGGCCGAGCCGCTGCGGGC CGAGCTGCCCGAGATCCGACTCGACTACCAGGGCGTGGTGAACGCGGTCTTCCTGCTCGACCGGCCACTCGACGGGCACT ATTGGGCGCCGGTGATCAACTGCGGCACCGACTTCGACGGTGTGGTGGAGATGTCGGCACTCACCGGCACCGAGCGCTAC GGCGGACGGACGCTGGTGTACGTGATGCACTACTGCGGACGGGACTCGGCGTTGTTCGCCGAACCGGACACCGAGATCGC GCGCCGCTGGACTGCCCAGCTGCGGGCGCTCTACCCCGACCGGCTCACCCACGCCGGGGCGGTCGAACAGGTGCGCGTGT TCAAAGCGCCCTTCGTGGAGCCGATTCCGACACTGGGTTACCACGAACGCATGCCCGCGAGCCGGGTCGGTGACACGAAC GTCTTCCTGGCCACCACGGCGCAGATCTACCCCGAGGTCACGAGCTGGAATTCGTCGGTGGGACTCGCCGGCCGCGTGGT GCGCGAGGTGATCGACAACCGCGAGTCGGCCAGGCGCCGGACGGTGGCCAATGCGTGA
Upstream 100 bases:
>100_bases GCACGGTGCGAGCAAGCTGAAGTTGGCACGCACGCTCAAGCAGTACTTCAAACTGCTTGTCCGTGAGTCCTTCACACCCG CGCCCTACCGGCAGGTCTAG
Downstream 100 bases:
>100_bases CAGCAGCGCCAGAGTGCAGGCCGCCGAAATACTCAGTGTGCTCGGCGGAACCACGTTCGCGGTCGCGGTCAGCTCCGACG TCGCCGTGCACCGGGAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: Protoporphyrinogen Oxidase; Protoporphyrinogen Oxidase Protein; FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Flavin-Containing Superfamily
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MSTPVEPGPVVVIGGGISGLTAAYRLARASIPVRLVESAGQLGGLGIGGEIGGVEIERFYHCVMPTDEHLLPLLEELGLA ADIGWQQTTMGMNIDGRRYPFNSAVDLLRFTPLRFTQRIRFGAVSLLLRRLGRGKDLDNTRTEDWLRGVYGPTVWQRLLR PLFGAKFGDAFGEVPARYLYQRLGRESNVATRGYPLGTYRSIVDRLRESIESDGGRVDLGVGVQSVTADGDGATVRLDTG EEIAAQSVVSTVPIPLLRSLSAEPLRAELPEIRLDYQGVVNAVFLLDRPLDGHYWAPVINCGTDFDGVVEMSALTGTERY GGRTLVYVMHYCGRDSALFAEPDTEIARRWTAQLRALYPDRLTHAGAVEQVRVFKAPFVEPIPTLGYHERMPASRVGDTN VFLATTAQIYPEVTSWNSSVGLAGRVVREVIDNRESARRRTVANA
Sequences:
>Translated_445_residues MSTPVEPGPVVVIGGGISGLTAAYRLARASIPVRLVESAGQLGGLGIGGEIGGVEIERFYHCVMPTDEHLLPLLEELGLA ADIGWQQTTMGMNIDGRRYPFNSAVDLLRFTPLRFTQRIRFGAVSLLLRRLGRGKDLDNTRTEDWLRGVYGPTVWQRLLR PLFGAKFGDAFGEVPARYLYQRLGRESNVATRGYPLGTYRSIVDRLRESIESDGGRVDLGVGVQSVTADGDGATVRLDTG EEIAAQSVVSTVPIPLLRSLSAEPLRAELPEIRLDYQGVVNAVFLLDRPLDGHYWAPVINCGTDFDGVVEMSALTGTERY GGRTLVYVMHYCGRDSALFAEPDTEIARRWTAQLRALYPDRLTHAGAVEQVRVFKAPFVEPIPTLGYHERMPASRVGDTN VFLATTAQIYPEVTSWNSSVGLAGRVVREVIDNRESARRRTVANA >Mature_444_residues STPVEPGPVVVIGGGISGLTAAYRLARASIPVRLVESAGQLGGLGIGGEIGGVEIERFYHCVMPTDEHLLPLLEELGLAA DIGWQQTTMGMNIDGRRYPFNSAVDLLRFTPLRFTQRIRFGAVSLLLRRLGRGKDLDNTRTEDWLRGVYGPTVWQRLLRP LFGAKFGDAFGEVPARYLYQRLGRESNVATRGYPLGTYRSIVDRLRESIESDGGRVDLGVGVQSVTADGDGATVRLDTGE EIAAQSVVSTVPIPLLRSLSAEPLRAELPEIRLDYQGVVNAVFLLDRPLDGHYWAPVINCGTDFDGVVEMSALTGTERYG GRTLVYVMHYCGRDSALFAEPDTEIARRWTAQLRALYPDRLTHAGAVEQVRVFKAPFVEPIPTLGYHERMPASRVGDTNV FLATTAQIYPEVTSWNSSVGLAGRVVREVIDNRESARRRTVANA
Specific function: Unknown
COG id: COG1232
COG function: function code H; Protoporphyrinogen oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48858; Mature: 48727
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPVEPGPVVVIGGGISGLTAAYRLARASIPVRLVESAGQLGGLGIGGEIGGVEIERFY CCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEHHHHE HCVMPTDEHLLPLLEELGLAADIGWQQTTMGMNIDGRRYPFNSAVDLLRFTPLRFTQRIR EECCCCCHHHHHHHHHCCCHHCCCCCCEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHH FGAVSLLLRRLGRGKDLDNTRTEDWLRGVYGPTVWQRLLRPLFGAKFGDAFGEVPARYLY HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QRLGRESNVATRGYPLGTYRSIVDRLRESIESDGGRVDLGVGVQSVTADGDGATVRLDTG HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCEEEECCC EEIAAQSVVSTVPIPLLRSLSAEPLRAELPEIRLDYQGVVNAVFLLDRPLDGHYWAPVIN HHHHHHHHHHHCCHHHHHHCCCCCHHHCCCHHEECHHHHHHHHHHHCCCCCCCCCCCEEE CGTDFDGVVEMSALTGTERYGGRTLVYVMHYCGRDSALFAEPDTEIARRWTAQLRALYPD CCCCCCHHEEHHHHCCCHHCCCEEEEEHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCHH RLTHAGAVEQVRVFKAPFVEPIPTLGYHERMPASRVGDTNVFLATTAQIYPEVTSWNSSV HHHHCCHHHHHHHHHCCCCCCCCCCCCHHCCCHHHCCCCCEEEEEHHHHCCHHHCCCCCC GLAGRVVREVIDNRESARRRTVANA CHHHHHHHHHHHCHHHHHHHHCCCC >Mature Secondary Structure STPVEPGPVVVIGGGISGLTAAYRLARASIPVRLVESAGQLGGLGIGGEIGGVEIERFY CCCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEHHHHE HCVMPTDEHLLPLLEELGLAADIGWQQTTMGMNIDGRRYPFNSAVDLLRFTPLRFTQRIR EECCCCCHHHHHHHHHCCCHHCCCCCCEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHH FGAVSLLLRRLGRGKDLDNTRTEDWLRGVYGPTVWQRLLRPLFGAKFGDAFGEVPARYLY HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QRLGRESNVATRGYPLGTYRSIVDRLRESIESDGGRVDLGVGVQSVTADGDGATVRLDTG HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCEEEECCC EEIAAQSVVSTVPIPLLRSLSAEPLRAELPEIRLDYQGVVNAVFLLDRPLDGHYWAPVIN HHHHHHHHHHHCCHHHHHHCCCCCHHHCCCHHEECHHHHHHHHHHHCCCCCCCCCCCEEE CGTDFDGVVEMSALTGTERYGGRTLVYVMHYCGRDSALFAEPDTEIARRWTAQLRALYPD CCCCCCHHEEHHHHCCCHHCCCEEEEEHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCHH RLTHAGAVEQVRVFKAPFVEPIPTLGYHERMPASRVGDTNVFLATTAQIYPEVTSWNSSV HHHHCCHHHHHHHHHCCCCCCCCCCCCHHCCCHHHCCCCCEEEEEHHHHCCHHHCCCCCC GLAGRVVREVIDNRESARRRTVANA CHHHHHHHHHHHCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA