| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867340
Identifier: 119867340
GI number: 119867340
Start: 1386859
End: 1387560
Strand: Reverse
Name: 119867340
Synonym: Mkms_1290
Alternate gene names: NA
Gene position: 1387560-1386859 (Counterclockwise)
Preceding gene: 119867343
Following gene: 119867337
Centisome position: 24.19
GC content: 71.51
Gene sequence:
>702_bases ATGTGTCGTCGGCGACACGTCGGCAGCCCGCCGTACGATCCGGCCGTGTCCCGCAGCAGTCGCCTCAAGCTCTACGGGGC GCTGGGCGCCGCGTCGGGACTGAGCGCCCACCTGCTCGGCTGGCCGCCCGGAACCGTCATGGCCCTCGTCGTCGCGGTGC CACTGCTCACCGCCGCCGCGCCCCGGTTCGTGCTCGGCGCCATCTCGGGGGCCACCGCATCATCAGCGCCCGAAGACGAG ATGACGGGCACGCAGTTCGAGGACCACATCGCGCACATCGCCCGGTCCTGCGGCGTCCCGGTGATCATGACCCCGCTGAC CGGCGACTGGGGGGTCGACCTCATCCTCGGCCGGCGCCCCAATCGCGTCGCGGTGCAGTGCAAACGCCAATCGCGGCCGG TCGGTACGAGCGCGGTGCAGGAGGTCGTCGCCGGCGCGCCGATGCAGGACTGCGTGCGCACCATGGTGGTCACCAACAAC GAATTCACCCCGGCGGCACGCAAACTCGCCGAACGCCACGGGTGCGAACTGGTCGGCCGTCAGGAACTCCCTCGGCTCCG CTCGACCATCCGGCGCCTCACCGAGGACGCCGATGTCAGCGCAAGGCCTCGCGCACCGCATCCACCGCGGCGTCGAGTTC CGCCCGGGACACCGTCAGCGCCGGGCGGAAGCGCACCGAATCCACCCCGCTCGCCAACATGA
Upstream 100 bases:
>100_bases CATCGTGCGGACTCTGATACACCGTGCACCCACCGGACTCTCGCCTTTACCGACGCAGCGGGTGTTCCCCCAGGTGAGCA GGCCGTAAACCTGAGCGCCG
Downstream 100 bases:
>100_bases TCACCCGCCGCTCCCACAACCGGCGGATCAGATCGTCGCGTTGCGCCTGCGACGGCAGGCTGAACGCGCGCATGAGTCCG CGGCCCCGCACGTCGAGCAC
Product: restriction endonuclease
Products: NA
Alternate protein names: Type II Restriction Endonuclease Family Protein; Restriction Endonuclease Family Protein; Mrr-Like Endonuclease; Prophage; Endonuclease
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MCRRRHVGSPPYDPAVSRSSRLKLYGALGAASGLSAHLLGWPPGTVMALVVAVPLLTAAAPRFVLGAISGATASSAPEDE MTGTQFEDHIAHIARSCGVPVIMTPLTGDWGVDLILGRRPNRVAVQCKRQSRPVGTSAVQEVVAGAPMQDCVRTMVVTNN EFTPAARKLAERHGCELVGRQELPRLRSTIRRLTEDADVSARPRAPHPPRRRVPPGTPSAPGGSAPNPPRSPT
Sequences:
>Translated_233_residues MCRRRHVGSPPYDPAVSRSSRLKLYGALGAASGLSAHLLGWPPGTVMALVVAVPLLTAAAPRFVLGAISGATASSAPEDE MTGTQFEDHIAHIARSCGVPVIMTPLTGDWGVDLILGRRPNRVAVQCKRQSRPVGTSAVQEVVAGAPMQDCVRTMVVTNN EFTPAARKLAERHGCELVGRQELPRLRSTIRRLTEDADVSARPRAPHPPRRRVPPGTPSAPGGSAPNPPRSPT >Mature_233_residues MCRRRHVGSPPYDPAVSRSSRLKLYGALGAASGLSAHLLGWPPGTVMALVVAVPLLTAAAPRFVLGAISGATASSAPEDE MTGTQFEDHIAHIARSCGVPVIMTPLTGDWGVDLILGRRPNRVAVQCKRQSRPVGTSAVQEVVAGAPMQDCVRTMVVTNN EFTPAARKLAERHGCELVGRQELPRLRSTIRRLTEDADVSARPRAPHPPRRRVPPGTPSAPGGSAPNPPRSPT
Specific function: Unknown
COG id: COG1787
COG function: function code V; Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24685; Mature: 24685
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRRRHVGSPPYDPAVSRSSRLKLYGALGAASGLSAHLLGWPPGTVMALVVAVPLLTAAA CCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHC PRFVLGAISGATASSAPEDEMTGTQFEDHIAHIARSCGVPVIMTPLTGDWGVDLILGRRP HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCC NRVAVQCKRQSRPVGTSAVQEVVAGAPMQDCVRTMVVTNNEFTPAARKLAERHGCELVGR CCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHCH QELPRLRSTIRRLTEDADVSARPRAPHPPRRRVPPGTPSAPGGSAPNPPRSPT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MCRRRHVGSPPYDPAVSRSSRLKLYGALGAASGLSAHLLGWPPGTVMALVVAVPLLTAAA CCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHC PRFVLGAISGATASSAPEDEMTGTQFEDHIAHIARSCGVPVIMTPLTGDWGVDLILGRRP HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCC NRVAVQCKRQSRPVGTSAVQEVVAGAPMQDCVRTMVVTNNEFTPAARKLAERHGCELVGR CCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHCH QELPRLRSTIRRLTEDADVSARPRAPHPPRRRVPPGTPSAPGGSAPNPPRSPT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA