| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867236
Identifier: 119867236
GI number: 119867236
Start: 1269310
End: 1270272
Strand: Reverse
Name: 119867236
Synonym: Mkms_1186
Alternate gene names: NA
Gene position: 1270272-1269310 (Counterclockwise)
Preceding gene: 119867238
Following gene: 119867233
Centisome position: 22.14
GC content: 69.37
Gene sequence:
>963_bases GTGGCTCGGGTGGTTATCCACAGGTTGCGAGTCACCACTACCGCCCGCGGACGAGATCCCCGACAGTCGACAACCATGGA TGCGGTGGGGCGGGCCCTGCTTCGACAGGGTGGCGGCCTGGCGACGACGCGGGAGCTGCTCGCGGTCATGACCCGTCAGC AACTGGACTGGCATGTGCGACGCGGCGACTTGGTCCGCGTCTGGTACGGCGTCTACGCCGACCACCAGCCCGACGTGCGG GGCCGGTTGTCTGCCCTCGACCTGTTCCTCGGCGAAGAGGCGGTCGCATGCCTGGGAACGGCGGCGGTCCTGTACGGATT CGACGTCGAGAACACCGCGGCGATCCACATGCTGGACCCCGGCAGGCGGGTCCGCCCGACGATCGGACTGACTGTGCACC AACGCCTCGGCGCACCGCTGCAGCGTGTCGCGGGCCGACTTGCCACCGCACCTGCCTGGACTGCGGTGGAGACCGCCCGT CGGCTCCCCCGGCCCAGGGCTCTCGCGACGTTGGATGCCGCCGTCCACTCGACCTGGTGCGACACCGGTGACCTCCAGGG AGCTGTCGACGCGCAGGCCGGCCGCCGGGGCATCGTCTCGGTGCGCGAGCTGTTGCCGCACGTCGACGGGCGCGCCGAAT CGGCGATGGAGAGCGAAGCCCGGCTGGTGATGATCGACTATGGCCTCCCGAAACCGGAGCTGCAATACGAGATCCGCGGC CCCGGCGGCGTGGTGTGGCGGGTCGACTTCGCCTGGCCTGACCGGCGCGTGGTCGCGGAGTACGAAAGCGTGGACTGGCA CGTCGGCCCGCGCGAAATGATCAGAGATCGAACACGTCTGGCGGGAATTCAGGAGTCAGGCTGGACGGTGATCCCCATGG TCGTCGACGACATCCGGCGCCATCCCGCGCGTTTGGCGCAGCGGATCGCACACCACTTGTCACAGCCCCGACTGGCCGGC TGA
Upstream 100 bases:
>100_bases GTTACCAATGGGTAACTATCCAGAACCGCCTCTTCTGCGAGCAGACACAGAATCGCGTTCCGAGGGCCGCTCGAACGCGA TTCTGTGTCTGGTCGCCGCC
Downstream 100 bases:
>100_bases GTAGACACAGAATCGCGTTCCACGGCACTGCGGAACGCGATTCTGCGTCTGCTCGCGGAGAAACCTCAGGCGCCGACCGT CAGGCCGACCTTCTGGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MARVVIHRLRVTTTARGRDPRQSTTMDAVGRALLRQGGGLATTRELLAVMTRQQLDWHVRRGDLVRVWYGVYADHQPDVR GRLSALDLFLGEEAVACLGTAAVLYGFDVENTAAIHMLDPGRRVRPTIGLTVHQRLGAPLQRVAGRLATAPAWTAVETAR RLPRPRALATLDAAVHSTWCDTGDLQGAVDAQAGRRGIVSVRELLPHVDGRAESAMESEARLVMIDYGLPKPELQYEIRG PGGVVWRVDFAWPDRRVVAEYESVDWHVGPREMIRDRTRLAGIQESGWTVIPMVVDDIRRHPARLAQRIAHHLSQPRLAG
Sequences:
>Translated_320_residues MARVVIHRLRVTTTARGRDPRQSTTMDAVGRALLRQGGGLATTRELLAVMTRQQLDWHVRRGDLVRVWYGVYADHQPDVR GRLSALDLFLGEEAVACLGTAAVLYGFDVENTAAIHMLDPGRRVRPTIGLTVHQRLGAPLQRVAGRLATAPAWTAVETAR RLPRPRALATLDAAVHSTWCDTGDLQGAVDAQAGRRGIVSVRELLPHVDGRAESAMESEARLVMIDYGLPKPELQYEIRG PGGVVWRVDFAWPDRRVVAEYESVDWHVGPREMIRDRTRLAGIQESGWTVIPMVVDDIRRHPARLAQRIAHHLSQPRLAG >Mature_319_residues ARVVIHRLRVTTTARGRDPRQSTTMDAVGRALLRQGGGLATTRELLAVMTRQQLDWHVRRGDLVRVWYGVYADHQPDVRG RLSALDLFLGEEAVACLGTAAVLYGFDVENTAAIHMLDPGRRVRPTIGLTVHQRLGAPLQRVAGRLATAPAWTAVETARR LPRPRALATLDAAVHSTWCDTGDLQGAVDAQAGRRGIVSVRELLPHVDGRAESAMESEARLVMIDYGLPKPELQYEIRGP GGVVWRVDFAWPDRRVVAEYESVDWHVGPREMIRDRTRLAGIQESGWTVIPMVVDDIRRHPARLAQRIAHHLSQPRLAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35563; Mature: 35432
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVVIHRLRVTTTARGRDPRQSTTMDAVGRALLRQGGGLATTRELLAVMTRQQLDWHVR CCHHEEEHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEC RGDLVRVWYGVYADHQPDVRGRLSALDLFLGEEAVACLGTAAVLYGFDVENTAAIHMLDP CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCCEEEEEECC GRRVRPTIGLTVHQRLGAPLQRVAGRLATAPAWTAVETARRLPRPRALATLDAAVHSTWC CCCCCCEECEEEHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC DTGDLQGAVDAQAGRRGIVSVRELLPHVDGRAESAMESEARLVMIDYGLPKPELQYEIRG CCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCEEEEEEC PGGVVWRVDFAWPDRRVVAEYESVDWHVGPREMIRDRTRLAGIQESGWTVIPMVVDDIRR CCEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHH HPARLAQRIAHHLSQPRLAG CHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ARVVIHRLRVTTTARGRDPRQSTTMDAVGRALLRQGGGLATTRELLAVMTRQQLDWHVR CHHEEEHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEC RGDLVRVWYGVYADHQPDVRGRLSALDLFLGEEAVACLGTAAVLYGFDVENTAAIHMLDP CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCCEEEEEECC GRRVRPTIGLTVHQRLGAPLQRVAGRLATAPAWTAVETARRLPRPRALATLDAAVHSTWC CCCCCCEECEEEHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC DTGDLQGAVDAQAGRRGIVSVRELLPHVDGRAESAMESEARLVMIDYGLPKPELQYEIRG CCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCEEEEEEC PGGVVWRVDFAWPDRRVVAEYESVDWHVGPREMIRDRTRLAGIQESGWTVIPMVVDDIRR CCEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHH HPARLAQRIAHHLSQPRLAG CHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]