| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867163
Identifier: 119867163
GI number: 119867163
Start: 1198158
End: 1198961
Strand: Direct
Name: 119867163
Synonym: Mkms_1112
Alternate gene names: NA
Gene position: 1198158-1198961 (Clockwise)
Preceding gene: 119867162
Following gene: 119867164
Centisome position: 20.88
GC content: 70.9
Gene sequence:
>804_bases GTGAACAGAAAAGGCTCTGCGCCAGTCGATCTCGACGTCGATGTCACCACCGACGGTGACCTCCCGGGCGCCGTCGAATA CGCCAGGGCCAAGATCGGCCGGCTGGGCCGCGTCGCCGACCGCCCGGTGCTCGCCGCCCGCGTCCGACTGACCAGACGCG CGGACCCGGCCGTGGAGCGGCCTGTCGTCGCGCAGGCCAACCTCGACGTGGAAGGCCGGCTGGTACGCGCACAGGTTGAG GGAGCCACCGCCCATGAGGCGATCGACCGGCTCGAGGGCCGACTGCGGCGGCGGCTCGAGCGGGTGGCCCGGCACTGGGA GGCGCGGCGGGGCGGACTGCCGACCGGCGAGCCGAACGAGTGGCGCCACCAGTCCGAACCCGAACACCGCCCCGGGCACT TCCCCCGGCCGGCCGACGACCGCCAGGTGTTGCGCCGCAAGTCCTTCACCCTGCGCGCGTGCACGGTCGACGAGGCGGTG GAGGAGCTGGAACTGCTCGACTACGACTTCCATCTGTTCACCGAGAAGGCCACCGGGTACGCGGCCGTGCTGTACCGGGG CGGGGAGACCGGATACCGCGTTGCGCTCGTGACACCCTGTGCGCGAGAGGAATTGGCACCGTTCGATTCGCCGGTGACGA TCAGCGACCTGCCGGTGGCCTGCCTGGCGACGGCGCAGGCCGTGGACCGTCTGAACCTGGCCGGGCAGCCGTTCCTGTTC TTCGTCGACGCTGCCGAGGGACGTGCCTGCGTGCTCTATCACCGCTACGACGGCCACTACGGCTTGATCACACCGGCGGG ATAG
Upstream 100 bases:
>100_bases GCGCCGACCGGGATCGGCGTGAGGCCCGACGACCGGGGACCGCGGTTGAGGTGACCAATGACCCTGTTCCCGGCCTGTGA ATCCGGGTATGAATCGTCAT
Downstream 100 bases:
>100_bases GGGCCGTGGGTTCCCGCACCATGCACGCCTGGCGGATGCGCGTCCCGGGACCGATAGCCACCCATCCGCTCGAATCGGTC ACCACCGAGGTGCCCGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNRKGSAPVDLDVDVTTDGDLPGAVEYARAKIGRLGRVADRPVLAARVRLTRRADPAVERPVVAQANLDVEGRLVRAQVE GATAHEAIDRLEGRLRRRLERVARHWEARRGGLPTGEPNEWRHQSEPEHRPGHFPRPADDRQVLRRKSFTLRACTVDEAV EELELLDYDFHLFTEKATGYAAVLYRGGETGYRVALVTPCAREELAPFDSPVTISDLPVACLATAQAVDRLNLAGQPFLF FVDAAEGRACVLYHRYDGHYGLITPAG
Sequences:
>Translated_267_residues MNRKGSAPVDLDVDVTTDGDLPGAVEYARAKIGRLGRVADRPVLAARVRLTRRADPAVERPVVAQANLDVEGRLVRAQVE GATAHEAIDRLEGRLRRRLERVARHWEARRGGLPTGEPNEWRHQSEPEHRPGHFPRPADDRQVLRRKSFTLRACTVDEAV EELELLDYDFHLFTEKATGYAAVLYRGGETGYRVALVTPCAREELAPFDSPVTISDLPVACLATAQAVDRLNLAGQPFLF FVDAAEGRACVLYHRYDGHYGLITPAG >Mature_267_residues MNRKGSAPVDLDVDVTTDGDLPGAVEYARAKIGRLGRVADRPVLAARVRLTRRADPAVERPVVAQANLDVEGRLVRAQVE GATAHEAIDRLEGRLRRRLERVARHWEARRGGLPTGEPNEWRHQSEPEHRPGHFPRPADDRQVLRRKSFTLRACTVDEAV EELELLDYDFHLFTEKATGYAAVLYRGGETGYRVALVTPCAREELAPFDSPVTISDLPVACLATAQAVDRLNLAGQPFLF FVDAAEGRACVLYHRYDGHYGLITPAG
Specific function: Has been suggested to be a cytoplasmic translation factor [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29635; Mature: 29635
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKGSAPVDLDVDVTTDGDLPGAVEYARAKIGRLGRVADRPVLAARVRLTRRADPAVER CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC PVVAQANLDVEGRLVRAQVEGATAHEAIDRLEGRLRRRLERVARHWEARRGGLPTGEPNE CEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC WRHQSEPEHRPGHFPRPADDRQVLRRKSFTLRACTVDEAVEELELLDYDFHLFTEKATGY CCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECHHHHHHHHHHHCCCEEEEEECCCCE AAVLYRGGETGYRVALVTPCAREELAPFDSPVTISDLPVACLATAQAVDRLNLAGQPFLF EEEEEECCCCCEEEEEECCCCHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEE FVDAAEGRACVLYHRYDGHYGLITPAG EEECCCCCEEEEEEEECCEEEEEECCC >Mature Secondary Structure MNRKGSAPVDLDVDVTTDGDLPGAVEYARAKIGRLGRVADRPVLAARVRLTRRADPAVER CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC PVVAQANLDVEGRLVRAQVEGATAHEAIDRLEGRLRRRLERVARHWEARRGGLPTGEPNE CEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC WRHQSEPEHRPGHFPRPADDRQVLRRKSFTLRACTVDEAVEELELLDYDFHLFTEKATGY CCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECHHHHHHHHHHHCCCEEEEEECCCCE AAVLYRGGETGYRVALVTPCAREELAPFDSPVTISDLPVACLATAQAVDRLNLAGQPFLF EEEEEECCCCCEEEEEECCCCHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEE FVDAAEGRACVLYHRYDGHYGLITPAG EEECCCCCEEEEEEEECCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]