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The map label for this gene is 119867006

Identifier: 119867006

GI number: 119867006

Start: 1039344

End: 1039757

Strand: Direct

Name: 119867006

Synonym: Mkms_0954

Alternate gene names: NA

Gene position: 1039344-1039757 (Clockwise)

Preceding gene: 119867005

Following gene: 119867008

Centisome position: 18.12

GC content: 60.63

Gene sequence:

>414_bases
GTGGAGATCGTGATCGCACCAGGGGGATGTGCTGCGCCGAGGAATTTCGACAACTCCGATGCCGGAAGTCAGTACACTTC
ACTGGCGTTCACCGAAGCGCTGCGTGACTCTGGCATCGCCGGCTCGATCGGCTCAGTCGGCGACGCGCTGCACAACGCAC
TGATGAAATCGGCCATCGGCCTCTACAAGACCGAGCTGATCGACGCCAGGAATCCTGGACCCGACGAGGCGAGGTTGAGC
GCGAAACCGCCACCTGGGTGCACTGGTACAACACCACCCGCCTGCACTCCTCACTCGGATATCAATCCCCGGTCGACTAC
GAGAACCGCTACCGTGACATGGTCACCTCAATCGCCGAGGTGGCTTAACCCGAGGTCTCCATCCAGGCCAGGACGGTTCA
GATGCGTAATCTGA

Upstream 100 bases:

>100_bases
TATTGCTTCAGCCTTTGCGAGCGCCGCCACGTCGCTGGAAGCTCCTCTTGCCAGCCTCGTCGAAAAGCTCGATAGTTAGC
GGTGAACCGTCCTGGGACTG

Downstream 100 bases:

>100_bases
CGATGCGCACATCTCGATCACAGCTCACAACCGCGCCGAAGATAATGGCCAGCTACACCATCCTGGCCCCGTTTACTACC
GAACTCTCGCCGACGACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Domain-Containing Protein; Integrase Catalytic Subunit; Integrase Catalytic Region; Integrase Component; ISMsm1 Transposase OrfB

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MEIVIAPGGCAAPRNFDNSDAGSQYTSLAFTEALRDSGIAGSIGSVGDALHNALMKSAIGLYKTELIDARNPGPDEARLS
AKPPPGCTGTTPPACTPHSDINPRSTTRTATVTWSPQSPRWLNPRSPSRPGRFRCVI

Sequences:

>Translated_137_residues
MEIVIAPGGCAAPRNFDNSDAGSQYTSLAFTEALRDSGIAGSIGSVGDALHNALMKSAIGLYKTELIDARNPGPDEARLS
AKPPPGCTGTTPPACTPHSDINPRSTTRTATVTWSPQSPRWLNPRSPSRPGRFRCVI
>Mature_137_residues
MEIVIAPGGCAAPRNFDNSDAGSQYTSLAFTEALRDSGIAGSIGSVGDALHNALMKSAIGLYKTELIDARNPGPDEARLS
AKPPPGCTGTTPPACTPHSDINPRSTTRTATVTWSPQSPRWLNPRSPSRPGRFRCVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14417; Mature: 14417

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIVIAPGGCAAPRNFDNSDAGSQYTSLAFTEALRDSGIAGSIGSVGDALHNALMKSAIG
CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LYKTELIDARNPGPDEARLSAKPPPGCTGTTPPACTPHSDINPRSTTRTATVTWSPQSPR
HHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
WLNPRSPSRPGRFRCVI
CCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MEIVIAPGGCAAPRNFDNSDAGSQYTSLAFTEALRDSGIAGSIGSVGDALHNALMKSAIG
CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LYKTELIDARNPGPDEARLSAKPPPGCTGTTPPACTPHSDINPRSTTRTATVTWSPQSPR
HHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
WLNPRSPSRPGRFRCVI
CCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA