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The map label for this gene is 119866907

Identifier: 119866907

GI number: 119866907

Start: 934078

End: 934722

Strand: Direct

Name: 119866907

Synonym: Mkms_0854

Alternate gene names: NA

Gene position: 934078-934722 (Clockwise)

Preceding gene: 119866906

Following gene: 119866909

Centisome position: 16.28

GC content: 61.86

Gene sequence:

>645_bases
ATGGCCTCAGAACCGCCGCCCCGGCGCAGAACTCTTGCGCGTCGGGTGCCCGTTCGGTTCTACGTGTTCGACGTCCTGAG
TGTCGACGGCCGGGATATCACTCGGCAGGCATACGCGAGTCGACGCGACCACCTAACCGAGATCGCCACAGTCAGCACGG
GATGCACCGTGCAGTTTCCGTCGAGCTTCAGAGACACCGATCCCGCAACCGTGCTCGCCGCCTCAGCCGAACTGGGCCTC
GAGGGCATCGTCTGCAAGCACCTCGATTCCCAGTACACACCGGGGTTGCGGTCCCGCGACTGGATCAAAACACCGCATAG
GTTGCGAAGTGAGTTTGTAGTCGGCGGGTGGCTTCCCGGTGTAGGCGTCGACCACATCGGCGCCGTCTTAGTGGGTGCCT
ATGGCTTCGCGGGGCGGCTGCAGTTTTGCGGGGCAGTCCCCGCAGGGGCTAAGTGCCCGTCAGCGGCGAGTACTTATGAG
CCAGTTTCCTTGCTGAGGCGCAGAACTTCTCCGTTCAGTGATCCTCTCCCAGACTTTATTTTCCCCCCATGGCCGATGGG
TGACACCGCGACTGATTGGTGCGGTCGACTACCGGGAACTGAATGGCATTCTTCGGCACCCGTCATGGAAGGGTCTTCGA
ACTGA

Upstream 100 bases:

>100_bases
GTCACGGATACCGAAACCCGGTCAGGAGTCTGGTGCTGGACGGCGAGATTGTTGCACTCGATGAAACGGGAGTGCCCTCA
TTCGGCAGGCTCCAGCACCG

Downstream 100 bases:

>100_bases
CCTCGGCGACGCGCCGATCCTGCTCCCGGCCTGAAACTGGATCAGCTCGCCTTCTCCAGCGCTATACCAGTGCGGCGAAA
GCGAAAAACTTGTTGGTACC

Product: ATP-dependent DNA ligase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MASEPPPRRRTLARRVPVRFYVFDVLSVDGRDITRQAYASRRDHLTEIATVSTGCTVQFPSSFRDTDPATVLAASAELGL
EGIVCKHLDSQYTPGLRSRDWIKTPHRLRSEFVVGGWLPGVGVDHIGAVLVGAYGFAGRLQFCGAVPAGAKCPSAASTYE
PVSLLRRRTSPFSDPLPDFIFPPWPMGDTATDWCGRLPGTEWHSSAPVMEGSSN

Sequences:

>Translated_214_residues
MASEPPPRRRTLARRVPVRFYVFDVLSVDGRDITRQAYASRRDHLTEIATVSTGCTVQFPSSFRDTDPATVLAASAELGL
EGIVCKHLDSQYTPGLRSRDWIKTPHRLRSEFVVGGWLPGVGVDHIGAVLVGAYGFAGRLQFCGAVPAGAKCPSAASTYE
PVSLLRRRTSPFSDPLPDFIFPPWPMGDTATDWCGRLPGTEWHSSAPVMEGSSN
>Mature_213_residues
ASEPPPRRRTLARRVPVRFYVFDVLSVDGRDITRQAYASRRDHLTEIATVSTGCTVQFPSSFRDTDPATVLAASAELGLE
GIVCKHLDSQYTPGLRSRDWIKTPHRLRSEFVVGGWLPGVGVDHIGAVLVGAYGFAGRLQFCGAVPAGAKCPSAASTYEP
VSLLRRRTSPFSDPLPDFIFPPWPMGDTATDWCGRLPGTEWHSSAPVMEGSSN

Specific function: Unknown

COG id: COG1793

COG function: function code L; ATP-dependent DNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent DNA ligase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012309
- InterPro:   IPR012310
- InterPro:   IPR014146
- InterPro:   IPR002755
- InterPro:   IPR014144
- InterPro:   IPR014145
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF04679 DNA_ligase_A_C; PF01068 DNA_ligase_A_M; PF01896 DNA_primase_S [H]

EC number: NA

Molecular weight: Translated: 23318; Mature: 23186

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS50160 DNA_LIGASE_A3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASEPPPRRRTLARRVPVRFYVFDVLSVDGRDITRQAYASRRDHLTEIATVSTGCTVQFP
CCCCCCHHHHHHHHHCCEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECC
SSFRDTDPATVLAASAELGLEGIVCKHLDSQYTPGLRSRDWIKTPHRLRSEFVVGGWLPG
CCCCCCCCHHEEEHHHHHCCHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHEEECCCCCC
VGVDHIGAVLVGAYGFAGRLQFCGAVPAGAKCPSAASTYEPVSLLRRRTSPFSDPLPDFI
CCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
FPPWPMGDTATDWCGRLPGTEWHSSAPVMEGSSN
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASEPPPRRRTLARRVPVRFYVFDVLSVDGRDITRQAYASRRDHLTEIATVSTGCTVQFP
CCCCCHHHHHHHHHCCEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECC
SSFRDTDPATVLAASAELGLEGIVCKHLDSQYTPGLRSRDWIKTPHRLRSEFVVGGWLPG
CCCCCCCCHHEEEHHHHHCCHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHEEECCCCCC
VGVDHIGAVLVGAYGFAGRLQFCGAVPAGAKCPSAASTYEPVSLLRRRTSPFSDPLPDFI
CCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
FPPWPMGDTATDWCGRLPGTEWHSSAPVMEGSSN
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]