| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is hepT [H]
Identifier: 119866839
GI number: 119866839
Start: 833037
End: 834065
Strand: Direct
Name: hepT [H]
Synonym: Mkms_0785
Alternate gene names: 119866839
Gene position: 833037-834065 (Clockwise)
Preceding gene: 119866832
Following gene: 119866840
Centisome position: 14.52
GC content: 69.58
Gene sequence:
>1029_bases TTGTCACAGTATGTTGGCAGGGTGAGGACACCGGCGACTGTGGTGGCGGGCGTGGACTTCGGCGACGCGGCCTTCGCGGC CGACGTCCGCGCCGGAGTCGCCCGCATCGAGGATCTGATGTCCACCGAGCTGGGCAAGGCGGACGAGCTGATGGCCGAGG CCGTTCAGCATCTCTTCCAGGCCGGCGGTAAGCGGTTCCGCCCGCTGTTCACTGTGCTGTCGGCGCGGCTCGGGCCCGAA CCCGACGCCTGGCAGGTGACGGTGGCGGGTGCGGTGATCGAACTGGTGCACCTGGCGACGCTGTACCACGACGACGTCAT GGACGAGGCCCAGGTCCGGCGCGGGGCGCCGAGCGCCAACGCCCGCTGGGGCAACAACATCGCCATCCTCGCGGGCGACT ACCTGTTCGCCACCGCGTCGCGGCTGGTGTCGCGGTTGGGGCCGGAGGCCGTGCGGATCATCGCCGACACGTTCGCCCAA CTGGTGACCGGTCAGATGCGGGAGACCCGCGGTGCGGTCGAGGGCGTCGACGAGATCGAGCACTACCTCAAGGTCGTCTA CGAGAAGACGGCCTGCCTGATCGCGGCGTCGGGGCGGTTCGGGGCGACGTTCTCCGGCGCCGACGAGACCCAGATCGAGC GGTTGGCGCGCCTGGGCGGAATCGTCGGCACGGCGTTCCAGATCTCCGACGACATCATCGACATCGACAGCGATCCCGAC GAATCCGGCAAGGTTCCGGGCACCGATCTACGTGAGGGTGTTCACACTCTGCCGGTGCTCTACGCGCTGCGGGAGTCCGG TCCCGACACCGACCGCCTGCGCGAACTGCTCGCCCGGCCCGTCGACAACGACGACGATCTCGCCGAGGCCCTGCGGCTGC TACGCCGCTCACCAGGCATGGAGCAGGCCAAGGCGACCGTCGCCCGCTACGCGCAGCAGGCCCGCGACGAACTGGCCGCC CTGCCCGACATGCCGGGAAGGCAGGCGCTGGCCTCACTGGTCGACTACACGATCACCCGCCACGGCTGA
Upstream 100 bases:
>100_bases TCGATCACCAACACGTCGCGACCGGCGCGGGCCGCCCAGGCCGCGGCAGCCGAACCCGCAGGTCCGGCGCCGACAACGAC CACATCCGCCCGGGTCTTCA
Downstream 100 bases:
>100_bases ACATCGCCGGAACCCAGACGGCTGTATGCAGCGTTGGATCAGCGAAGACTCACGAGGAGGTAGCTGATGACGTGGAATCC GCACGCGAACAGGTTCAAGA
Product: trans-hexaprenyltranstransferase
Products: NA
Alternate protein names: HEPPP synthase subunit 2; Spore germination protein C3 [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSQYVGRVRTPATVVAGVDFGDAAFAADVRAGVARIEDLMSTELGKADELMAEAVQHLFQAGGKRFRPLFTVLSARLGPE PDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAGDYLFATASRLVSRLGPEAVRIIADTFAQ LVTGQMRETRGAVEGVDEIEHYLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQISDDIIDIDSDPD ESGKVPGTDLREGVHTLPVLYALRESGPDTDRLRELLARPVDNDDDLAEALRLLRRSPGMEQAKATVARYAQQARDELAA LPDMPGRQALASLVDYTITRHG
Sequences:
>Translated_342_residues MSQYVGRVRTPATVVAGVDFGDAAFAADVRAGVARIEDLMSTELGKADELMAEAVQHLFQAGGKRFRPLFTVLSARLGPE PDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAGDYLFATASRLVSRLGPEAVRIIADTFAQ LVTGQMRETRGAVEGVDEIEHYLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQISDDIIDIDSDPD ESGKVPGTDLREGVHTLPVLYALRESGPDTDRLRELLARPVDNDDDLAEALRLLRRSPGMEQAKATVARYAQQARDELAA LPDMPGRQALASLVDYTITRHG >Mature_341_residues SQYVGRVRTPATVVAGVDFGDAAFAADVRAGVARIEDLMSTELGKADELMAEAVQHLFQAGGKRFRPLFTVLSARLGPEP DAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAGDYLFATASRLVSRLGPEAVRIIADTFAQL VTGQMRETRGAVEGVDEIEHYLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQISDDIIDIDSDPDE SGKVPGTDLREGVHTLPVLYALRESGPDTDRLRELLARPVDNDDDLAEALRLLRRSPGMEQAKATVARYAQQARDELAAL PDMPGRQALASLVDYTITRHG
Specific function: Supplies heptaprenyl diphosphate, the precursor for the side chain of the isoprenoid quinone menaquinone-7 (MQ-7) [H]
COG id: COG0142
COG function: function code H; Geranylgeranyl pyrophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FPP/GGPP synthase family [H]
Homologues:
Organism=Homo sapiens, GI50659086, Length=313, Percent_Identity=32.2683706070287, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI4758430, Length=275, Percent_Identity=25.4545454545455, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI83700220, Length=275, Percent_Identity=25.4545454545455, Blast_Score=75, Evalue=8e-14, Organism=Escherichia coli, GI1789578, Length=294, Percent_Identity=31.9727891156463, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1786623, Length=231, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17505681, Length=301, Percent_Identity=31.2292358803987, Blast_Score=153, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6319475, Length=295, Percent_Identity=30.8474576271186, Blast_Score=129, Evalue=6e-31, Organism=Saccharomyces cerevisiae, GI6325188, Length=311, Percent_Identity=23.7942122186495, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24651612, Length=293, Percent_Identity=32.4232081911263, Blast_Score=141, Evalue=5e-34, Organism=Drosophila melanogaster, GI281365769, Length=287, Percent_Identity=26.1324041811847, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24660002, Length=287, Percent_Identity=26.1324041811847, Blast_Score=82, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014119 - InterPro: IPR000092 - InterPro: IPR017446 - InterPro: IPR008949 [H]
Pfam domain/function: PF00348 polyprenyl_synt [H]
EC number: =2.5.1.30 [H]
Molecular weight: Translated: 36925; Mature: 36794
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00444 POLYPRENYL_SYNTHET_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQYVGRVRTPATVVAGVDFGDAAFAADVRAGVARIEDLMSTELGKADELMAEAVQHLFQ CCCCHHCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AGGKRFRPLFTVLSARLGPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSAN HCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ARWGNNIAILAGDYLFATASRLVSRLGPEAVRIIADTFAQLVTGQMRETRGAVEGVDEIE CCCCCCEEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH HYLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQISDDIIDIDSDPD HHHHHHHHHHHHEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHEECCCEEECCCCCC ESGKVPGTDLREGVHTLPVLYALRESGPDTDRLRELLARPVDNDDDLAEALRLLRRSPGM CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCH EQAKATVARYAQQARDELAALPDMPGRQALASLVDYTITRHG HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SQYVGRVRTPATVVAGVDFGDAAFAADVRAGVARIEDLMSTELGKADELMAEAVQHLFQ CCCHHCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AGGKRFRPLFTVLSARLGPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSAN HCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ARWGNNIAILAGDYLFATASRLVSRLGPEAVRIIADTFAQLVTGQMRETRGAVEGVDEIE CCCCCCEEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH HYLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQISDDIIDIDSDPD HHHHHHHHHHHHEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHEECCCEEECCCCCC ESGKVPGTDLREGVHTLPVLYALRESGPDTDRLRELLARPVDNDDDLAEALRLLRRSPGM CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCH EQAKATVARYAQQARDELAALPDMPGRQALASLVDYTITRHG HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 2121900; 9720033 [H]