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The map label for this gene is psd [H]

Identifier: 119866661

GI number: 119866661

Start: 661543

End: 662250

Strand: Reverse

Name: psd [H]

Synonym: Mkms_0607

Alternate gene names: 119866661

Gene position: 662250-661543 (Counterclockwise)

Preceding gene: 119866662

Following gene: 119866660

Centisome position: 11.54

GC content: 72.74

Gene sequence:

>708_bases
ATGGCCAGACGCCCCAGCACCGATGACCTGAGATCCGGCCCAGAGCGGTTCATGGCGCTGGTGAAAACCACCGTCCCGCC
GGTACACCCCGCCGGCCTGCCGTTCATCGGCGCCGGCCTCGCGCTGGCGGCCGCGGGCCGCCGCAACCGGTGGGTGCGCG
GCGCGGGCCTGGTCGCCGCCGGCGCCAACGCCGCCTTCTTCCGGCATCCGCCGCGCGTGCCACCGACCCGCCCCGGTGTG
GTGGTCGCCCCCGCCGACGGCCTGATCTGCCTGGTCGAGGACGCCGAACCGCCCGCCGAACTCAACCTGCCGGCCCGGCC
CGTGCCGCGGGTGAGCATCTTCCTGTCGATCTTCGACGCCCATGTGCAGCGGATCCCCATCAGCGGTGAGGTGGTCGCCG
TCGAACACCGGCCCGGTCTGTTCGGATCCGCCGAGCTGGCGGCCGCCAGCGAGGACAACGAACGCAACAGCGTGGTGATC
CGCACCGACACCGGCGCACAGGTGATCGCGGTGCAGATCGCGGGCCTGGTCGCCCGCCGCATCGTCTGCGACCTCACCAC
CGGCGACAAGGTGACCATCGGCGACACCTACGGGCTGATCCGCTACGGCTCCCGGCTGGACACCTACCTGCCCGAAGGCA
CCGACATCCAGGTGCTGCCGGGCCAGCGCGCGGTGGGCGGCGAGACGATCCTGGCGGAGCTGCCGTGA

Upstream 100 bases:

>100_bases
AGATCCCCGAAGACGTCAGCGAGCTACCCGCCGGATCGCGGGTAGAAGTATGGGACCTGAGCTAGCCTGCCCGACACCCC
ACGCACGTAGAATCCAGCCG

Downstream 100 bases:

>100_bases
TCCAGCCGCGCAGCATCCCCAAACGCGTCGTCAGCCTGCGCATGCTGCCGAGCGCGATGACCGTGGCGGCGATCTGCCTC
GGGCTGTCGTCGGTCAAGTT

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MARRPSTDDLRSGPERFMALVKTTVPPVHPAGLPFIGAGLALAAAGRRNRWVRGAGLVAAGANAAFFRHPPRVPPTRPGV
VVAPADGLICLVEDAEPPAELNLPARPVPRVSIFLSIFDAHVQRIPISGEVVAVEHRPGLFGSAELAAASEDNERNSVVI
RTDTGAQVIAVQIAGLVARRIVCDLTTGDKVTIGDTYGLIRYGSRLDTYLPEGTDIQVLPGQRAVGGETILAELP

Sequences:

>Translated_235_residues
MARRPSTDDLRSGPERFMALVKTTVPPVHPAGLPFIGAGLALAAAGRRNRWVRGAGLVAAGANAAFFRHPPRVPPTRPGV
VVAPADGLICLVEDAEPPAELNLPARPVPRVSIFLSIFDAHVQRIPISGEVVAVEHRPGLFGSAELAAASEDNERNSVVI
RTDTGAQVIAVQIAGLVARRIVCDLTTGDKVTIGDTYGLIRYGSRLDTYLPEGTDIQVLPGQRAVGGETILAELP
>Mature_234_residues
ARRPSTDDLRSGPERFMALVKTTVPPVHPAGLPFIGAGLALAAAGRRNRWVRGAGLVAAGANAAFFRHPPRVPPTRPGVV
VAPADGLICLVEDAEPPAELNLPARPVPRVSIFLSIFDAHVQRIPISGEVVAVEHRPGLFGSAELAAASEDNERNSVVIR
TDTGAQVIAVQIAGLVARRIVCDLTTGDKVTIGDTYGLIRYGSRLDTYLPEGTDIQVLPGQRAVGGETILAELP

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR004428 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 24765; Mature: 24634

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRPSTDDLRSGPERFMALVKTTVPPVHPAGLPFIGAGLALAAAGRRNRWVRGAGLVAA
CCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHCCCCCCEEECCCEEEE
GANAAFFRHPPRVPPTRPGVVVAPADGLICLVEDAEPPAELNLPARPVPRVSIFLSIFDA
CCCCEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
HVQRIPISGEVVAVEHRPGLFGSAELAAASEDNERNSVVIRTDTGAQVIAVQIAGLVARR
HHHCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEEECCCCEEEEHHHHHHHHHH
IVCDLTTGDKVTIGDTYGLIRYGSRLDTYLPEGTDIQVLPGQRAVGGETILAELP
HEEEECCCCEEEECCCCCEEEECCCHHHCCCCCCEEEEECCCCCCCCCEEEEECC
>Mature Secondary Structure 
ARRPSTDDLRSGPERFMALVKTTVPPVHPAGLPFIGAGLALAAAGRRNRWVRGAGLVAA
CCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHCCCCCCEEECCCEEEE
GANAAFFRHPPRVPPTRPGVVVAPADGLICLVEDAEPPAELNLPARPVPRVSIFLSIFDA
CCCCEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
HVQRIPISGEVVAVEHRPGLFGSAELAAASEDNERNSVVIRTDTGAQVIAVQIAGLVARR
HHHCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEEECCCCEEEEHHHHHHHHHH
IVCDLTTGDKVTIGDTYGLIRYGSRLDTYLPEGTDIQVLPGQRAVGGETILAELP
HEEEECCCCEEEECCCCCEEEECCCHHHCCCCCCEEEEECCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA