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The map label for this gene is ygiP [C]

Identifier: 119866552

GI number: 119866552

Start: 549945

End: 550901

Strand: Reverse

Name: ygiP [C]

Synonym: Mkms_0498

Alternate gene names: 119866552

Gene position: 550901-549945 (Counterclockwise)

Preceding gene: 119866564

Following gene: 119866549

Centisome position: 9.6

GC content: 69.28

Gene sequence:

>957_bases
GTGACACCCGCTCAGCTCCGTGCCTATTCGGCGGTGGTGCGACTGGGTTCCGTGCGTGCGGCCGCCGAGGAACTCGGCAT
GTCGGACGCGGGAATCTCCATGCACGTCACACAGCTGCGCAAGGAACTCGACGATCCGCTGTTCAGCCGCACGTCGGCCG
GGCTGGCGTTCACTCCTGGAGGCCTTCGGCTCGCCAGTCGGGCCATCGAGATCCTGGGGCTGCAGCAGCAGACCGCCATC
GAGGTGACCGAAGCGGCCCACGGCAGGCGGTTGCTGCGCATCGCCGCGTCGACGATGTTCGCCGAACACGCCGCGCCCGG
CCTGATCGAGTTGTTCTCCGCGCGCGCCGACGATCTCACGGTGGAACTGTCTGTGCACCCCACGAGCCGGTTCCGCGACC
TGATCGAGTCACGCGCCGTCGACATCACGCTGGGCCCCGCACCCGCTGACCCCGGCCCCGCCCTCGTGGTACGCCCCTTT
CTCAAGTACCAGATCATCACCGTCGCCGCCCCCGAGACCGCCGCGGGCCCGGGCATGCAGGCACCCGCGCAGCTGCGCGA
GCACGACTGGATGCTGGGGCCGTCGGCCGGCGGCGTCGACGGTGAGGTCGCCACGATGCTGCGGAACCTGTCGATCCCGG
AGTCGCGGCAGCGCATCTTCCAGAGCGAGGCGGCCGCACTCGAGGAGGTGCAGCGCGCCGGCGGCGTGACGCTGACCCTC
GGCTTCGCGGTGTCGAGAGATCTTTCGTCGCGCCGGCTGGTGCAGATCAAAGGAGCGGGCCTGCAGACGTCCGGGGAGTG
GTTCGCTTCGACGCTCACGCCGGCGGCGCGCCCACCGGCATCATCGGAACTGATGCGTTTCATCACCACTCCCCGCTGCA
CACAGGCGATGATCCGCGGCACCGGTGTCGGCGTCACCCGCTTCAAGCCGAAGGTGCATGTGACGCTCTGGAGTTGA

Upstream 100 bases:

>100_bases
GTCGCCAGACCGGCCGTACCGCCGGTGCGCCACACTGCTGACAGGGCGCTCAGCACGTCTCTCACGTCGCCCAATGTATG
CCGACCGTAGGCTGCACACC

Downstream 100 bases:

>100_bases
GGCGGCTAACGCCCCGCCTCCAGCGCACGGATCAGGCTGGCCGCATCCCACGGCCCCTTGTGTCGCTTGCCGTTGACGAA
GAACGTAGGTGTGGAGTTGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MTPAQLRAYSAVVRLGSVRAAAEELGMSDAGISMHVTQLRKELDDPLFSRTSAGLAFTPGGLRLASRAIEILGLQQQTAI
EVTEAAHGRRLLRIAASTMFAEHAAPGLIELFSARADDLTVELSVHPTSRFRDLIESRAVDITLGPAPADPGPALVVRPF
LKYQIITVAAPETAAGPGMQAPAQLREHDWMLGPSAGGVDGEVATMLRNLSIPESRQRIFQSEAAALEEVQRAGGVTLTL
GFAVSRDLSSRRLVQIKGAGLQTSGEWFASTLTPAARPPASSELMRFITTPRCTQAMIRGTGVGVTRFKPKVHVTLWS

Sequences:

>Translated_318_residues
MTPAQLRAYSAVVRLGSVRAAAEELGMSDAGISMHVTQLRKELDDPLFSRTSAGLAFTPGGLRLASRAIEILGLQQQTAI
EVTEAAHGRRLLRIAASTMFAEHAAPGLIELFSARADDLTVELSVHPTSRFRDLIESRAVDITLGPAPADPGPALVVRPF
LKYQIITVAAPETAAGPGMQAPAQLREHDWMLGPSAGGVDGEVATMLRNLSIPESRQRIFQSEAAALEEVQRAGGVTLTL
GFAVSRDLSSRRLVQIKGAGLQTSGEWFASTLTPAARPPASSELMRFITTPRCTQAMIRGTGVGVTRFKPKVHVTLWS
>Mature_317_residues
TPAQLRAYSAVVRLGSVRAAAEELGMSDAGISMHVTQLRKELDDPLFSRTSAGLAFTPGGLRLASRAIEILGLQQQTAIE
VTEAAHGRRLLRIAASTMFAEHAAPGLIELFSARADDLTVELSVHPTSRFRDLIESRAVDITLGPAPADPGPALVVRPFL
KYQIITVAAPETAAGPGMQAPAQLREHDWMLGPSAGGVDGEVATMLRNLSIPESRQRIFQSEAAALEEVQRAGGVTLTLG
FAVSRDLSSRRLVQIKGAGLQTSGEWFASTLTPAARPPASSELMRFITTPRCTQAMIRGTGVGVTRFKPKVHVTLWS

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33966; Mature: 33835

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAQLRAYSAVVRLGSVRAAAEELGMSDAGISMHVTQLRKELDDPLFSRTSAGLAFTPG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCEEECCC
GLRLASRAIEILGLQQQTAIEVTEAAHGRRLLRIAASTMFAEHAAPGLIELFSARADDLT
HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEE
VELSVHPTSRFRDLIESRAVDITLGPAPADPGPALVVRPFLKYQIITVAAPETAAGPGMQ
EEEEECCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCC
APAQLREHDWMLGPSAGGVDGEVATMLRNLSIPESRQRIFQSEAAALEEVQRAGGVTLTL
CCHHHHHCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEE
GFAVSRDLSSRRLVQIKGAGLQTSGEWFASTLTPAARPPASSELMRFITTPRCTQAMIRG
EEEECCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHC
TGVGVTRFKPKVHVTLWS
CCCCEEEECCEEEEEEEC
>Mature Secondary Structure 
TPAQLRAYSAVVRLGSVRAAAEELGMSDAGISMHVTQLRKELDDPLFSRTSAGLAFTPG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCEEECCC
GLRLASRAIEILGLQQQTAIEVTEAAHGRRLLRIAASTMFAEHAAPGLIELFSARADDLT
HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEE
VELSVHPTSRFRDLIESRAVDITLGPAPADPGPALVVRPFLKYQIITVAAPETAAGPGMQ
EEEEECCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCC
APAQLREHDWMLGPSAGGVDGEVATMLRNLSIPESRQRIFQSEAAALEEVQRAGGVTLTL
CCHHHHHCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEE
GFAVSRDLSSRRLVQIKGAGLQTSGEWFASTLTPAARPPASSELMRFITTPRCTQAMIRG
EEEECCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHC
TGVGVTRFKPKVHVTLWS
CCCCEEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]