| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119866407
Identifier: 119866407
GI number: 119866407
Start: 385788
End: 386477
Strand: Direct
Name: 119866407
Synonym: Mkms_0352
Alternate gene names: NA
Gene position: 385788-386477 (Clockwise)
Preceding gene: 119866405
Following gene: 119866408
Centisome position: 6.72
GC content: 72.03
Gene sequence:
>690_bases ATGACGGACAGGGCCGTGGACCGGGAGCGGGCGGCACCGATCGGCTGTGGTCCCGGCGGCATGGGAGAGATCGTAATCCG GTCGCGCGGTGCAGGCCGAAGCTGGCATGGTGGCGGGGTGGGTGTGTGGCGGACGGTGTGCCGGGTCAGCGTGGCGGTGG GCTGCGCCTGCGGTGTGCTGTTCGGCGCCGCGCCGTCCCACGCGGACCCCGCCGAACCCGGCGTTGACACCCTGGTAGGG CCCGCGGCGACCGACACCTTCGGCGGATACCTCCCCGAAGACGGGACGCTGACCGCCTTCGACGTCGAGAATCCGATCGT CGGCAGGCTCGATCCCGCACTGCTGGCGGCCGTGCAGGAGGCCAGCCGCGCGGCGGCCGCCGACGGCGTCGAGGTCGAGA TCAACTCCGGTTGGCGCTCGATCGGGTTCCAGGAGCGGCTGTTCGAGGACGGGGTGCGCACCTACGGCAGCGTGGAGGTC GCCCGGCAGTTCGTCGCGTCACCGCAGACGTCGATGCACGTGGTCGGGCGGGCGGTGGACGTCGGCGGACCGGGCGCGGC GGCGTGGATGTCGCGCAACGGCCCACGGTTCGGACTGTGTCAGGTGTACGCCAACGAGCTGTGGCACTACGAGTTGACCG CGGACGCCAACGGCGCCTGCCCGCCGATGAAACCGAACGCGACCGGCTGA
Upstream 100 bases:
>100_bases CTTCGCGCCTGCCTGCGCGGCCGCGTCGTAGCTCGGCGGCCGGGCCTGCCACCACGTCCACACCGACAGGATCAGCGCGG CGGTGGCGATGAGGCAGGCA
Downstream 100 bases:
>100_bases CAGCCGGGAATGTCGTTCTCACGCTCGGTAACATGATGGCCGTGTCGGGAGAAGACGCGGTGACCACCGGTGTCGCGGGT TCTCTGATCCTGACGTCGGA
Product: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
Products: NA
Alternate protein names: D-Alanyl-D-Alanine Carboxypeptidase; VanY-Type Carboxypeptidase; D-Alanyl-D-Alanine Carboxypeptidase Family Protein; M15 Family Peptidase
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTDRAVDRERAAPIGCGPGGMGEIVIRSRGAGRSWHGGGVGVWRTVCRVSVAVGCACGVLFGAAPSHADPAEPGVDTLVG PAATDTFGGYLPEDGTLTAFDVENPIVGRLDPALLAAVQEASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVEV ARQFVASPQTSMHVVGRAVDVGGPGAAAWMSRNGPRFGLCQVYANELWHYELTADANGACPPMKPNATG
Sequences:
>Translated_229_residues MTDRAVDRERAAPIGCGPGGMGEIVIRSRGAGRSWHGGGVGVWRTVCRVSVAVGCACGVLFGAAPSHADPAEPGVDTLVG PAATDTFGGYLPEDGTLTAFDVENPIVGRLDPALLAAVQEASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVEV ARQFVASPQTSMHVVGRAVDVGGPGAAAWMSRNGPRFGLCQVYANELWHYELTADANGACPPMKPNATG >Mature_228_residues TDRAVDRERAAPIGCGPGGMGEIVIRSRGAGRSWHGGGVGVWRTVCRVSVAVGCACGVLFGAAPSHADPAEPGVDTLVGP AATDTFGGYLPEDGTLTAFDVENPIVGRLDPALLAAVQEASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVEVA RQFVASPQTSMHVVGRAVDVGGPGAAAWMSRNGPRFGLCQVYANELWHYELTADANGACPPMKPNATG
Specific function: Unknown
COG id: COG1876
COG function: function code M; D-alanyl-D-alanine carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23710; Mature: 23579
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRAVDRERAAPIGCGPGGMGEIVIRSRGAGRSWHGGGVGVWRTVCRVSVAVGCACGVL CCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FGAAPSHADPAEPGVDTLVGPAATDTFGGYLPEDGTLTAFDVENPIVGRLDPALLAAVQE HCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH ASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVEVARQFVASPQTSMHVVGRAVD HHHHHHCCCEEEEECCCCHHCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHEEHHEEEE VGGPGAAAWMSRNGPRFGLCQVYANELWHYELTADANGACPPMKPNATG CCCCCHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TDRAVDRERAAPIGCGPGGMGEIVIRSRGAGRSWHGGGVGVWRTVCRVSVAVGCACGVL CCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FGAAPSHADPAEPGVDTLVGPAATDTFGGYLPEDGTLTAFDVENPIVGRLDPALLAAVQE HCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH ASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVEVARQFVASPQTSMHVVGRAVD HHHHHHCCCEEEEECCCCHHCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHEEHHEEEE VGGPGAAAWMSRNGPRFGLCQVYANELWHYELTADANGACPPMKPNATG CCCCCHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA