| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119866280
Identifier: 119866280
GI number: 119866280
Start: 242229
End: 243143
Strand: Direct
Name: 119866280
Synonym: Mkms_0224
Alternate gene names: NA
Gene position: 242229-243143 (Clockwise)
Preceding gene: 119866277
Following gene: 119866281
Centisome position: 4.22
GC content: 71.15
Gene sequence:
>915_bases GTGAGTGAGCACGCCACCAACCCGGCGCGGCGGGACCGACTGCGGGAGCTGCTCGACGCCGTCGTCGACGTCTCCAACGC CGAGGTCGGCGATATGGCGCGCAGCAGCTACGCCTCGGAATTCCACTTCTCCCGCGAGGTGCGCCGGCTCACCGGGGAGC CACCGGCCGCGCTGCGCCGACGGATCATGCTCGAACGTGCGGCCTGGCGGTTGCGCCGCGGCGAACCCGTCGCCGCCGTC GCGGCCGACGAGGGCTGGTCGTCACCGGAGGTGTTCTCCCGGGCGTTCCGCCGGACGTTCGGCGTACCGCCGTCGCGCGC CGCCGACGTCGGATTCCGGGTGCCCGCACCCAACGGGCTGCACTTCCACCCGCCGCAGTCGCTGTGGCTCGACGGTGACG GCACGACCAAGGAGCCCGATCCGAGTCGGCTCATGGTCGCCCATGACGTCGCCGACACCGCCTACCTCATCGACCGCGCC CGGGAACTGAGCGAGGACCAGTGGTGGCGGGAGGTCGCACCCGGACAGGTGGTGCTGCACTGGGACGGTCCCGAACCCAG CGTCGGTGCGGTGCTCGGTGCGCTGGTGTGGACCAAGGAGGTCTGGCTGGCCACCATCGAGGGCCGGGACTTCCCCGACC GCTCCCGGTCGACGGTGGACCAGCTCGCCGTCCGGCACGCGGACATCGGAAAGCGTTGGTCGGCAATGGTTTCAGAGTAC TCGGCCGCCGGGCGGATGGGCGACACCGTGATCGACGCGCTGTGCGATCCGCCCGAGTCGTTCCAGCTGTACGGGATCGT GGCGCATGTGTTGACGTTCTCGGCGCACCGGCGCGGCCTGGCTCGAACCATGCTGGCCGCGTTGGGCGTGCCGACGGAGC AGGGTGACCCGCTGGACTGGATGAGGAGGCACTGA
Upstream 100 bases:
>100_bases CAGCGCCTCTAATTCACCCACTGGCGGTGGAGTGTAGTGAGCGCGGACGCAGCAGGAATTGTCATGTCCCTGTGGGTGGG CGGCGGCCATACTCGGATCC
Downstream 100 bases:
>100_bases GATGGCGACCGTGTACTACACCGCGTCGAGCCTGGACGGTTACATCGTCGACGCCGACGACAGCCTGGACTGGCTGATTT CCCGCGACATCGACCCCGAC
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Helix-Turn-Helix AraC Domain-Containing Protein; Helix-Turn-Helix Domain-Containing Protein; AraC Family Transcriptional Regulator; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator AraC Family
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSEHATNPARRDRLRELLDAVVDVSNAEVGDMARSSYASEFHFSREVRRLTGEPPAALRRRIMLERAAWRLRRGEPVAAV AADEGWSSPEVFSRAFRRTFGVPPSRAADVGFRVPAPNGLHFHPPQSLWLDGDGTTKEPDPSRLMVAHDVADTAYLIDRA RELSEDQWWREVAPGQVVLHWDGPEPSVGAVLGALVWTKEVWLATIEGRDFPDRSRSTVDQLAVRHADIGKRWSAMVSEY SAAGRMGDTVIDALCDPPESFQLYGIVAHVLTFSAHRRGLARTMLAALGVPTEQGDPLDWMRRH
Sequences:
>Translated_304_residues MSEHATNPARRDRLRELLDAVVDVSNAEVGDMARSSYASEFHFSREVRRLTGEPPAALRRRIMLERAAWRLRRGEPVAAV AADEGWSSPEVFSRAFRRTFGVPPSRAADVGFRVPAPNGLHFHPPQSLWLDGDGTTKEPDPSRLMVAHDVADTAYLIDRA RELSEDQWWREVAPGQVVLHWDGPEPSVGAVLGALVWTKEVWLATIEGRDFPDRSRSTVDQLAVRHADIGKRWSAMVSEY SAAGRMGDTVIDALCDPPESFQLYGIVAHVLTFSAHRRGLARTMLAALGVPTEQGDPLDWMRRH >Mature_303_residues SEHATNPARRDRLRELLDAVVDVSNAEVGDMARSSYASEFHFSREVRRLTGEPPAALRRRIMLERAAWRLRRGEPVAAVA ADEGWSSPEVFSRAFRRTFGVPPSRAADVGFRVPAPNGLHFHPPQSLWLDGDGTTKEPDPSRLMVAHDVADTAYLIDRAR ELSEDQWWREVAPGQVVLHWDGPEPSVGAVLGALVWTKEVWLATIEGRDFPDRSRSTVDQLAVRHADIGKRWSAMVSEYS AAGRMGDTVIDALCDPPESFQLYGIVAHVLTFSAHRRGLARTMLAALGVPTEQGDPLDWMRRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33916; Mature: 33784
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHATNPARRDRLRELLDAVVDVSNAEVGDMARSSYASEFHFSREVRRLTGEPPAALRR CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RIMLERAAWRLRRGEPVAAVAADEGWSSPEVFSRAFRRTFGVPPSRAADVGFRVPAPNGL HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCC HFHPPQSLWLDGDGTTKEPDPSRLMVAHDVADTAYLIDRARELSEDQWWREVAPGQVVLH EECCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE WDGPEPSVGAVLGALVWTKEVWLATIEGRDFPDRSRSTVDQLAVRHADIGKRWSAMVSEY ECCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAGRMGDTVIDALCDPPESFQLYGIVAHVLTFSAHRRGLARTMLAALGVPTEQGDPLDW HHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH MRRH HHCC >Mature Secondary Structure SEHATNPARRDRLRELLDAVVDVSNAEVGDMARSSYASEFHFSREVRRLTGEPPAALRR CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RIMLERAAWRLRRGEPVAAVAADEGWSSPEVFSRAFRRTFGVPPSRAADVGFRVPAPNGL HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCC HFHPPQSLWLDGDGTTKEPDPSRLMVAHDVADTAYLIDRARELSEDQWWREVAPGQVVLH EECCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE WDGPEPSVGAVLGALVWTKEVWLATIEGRDFPDRSRSTVDQLAVRHADIGKRWSAMVSEY ECCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAGRMGDTVIDALCDPPESFQLYGIVAHVLTFSAHRRGLARTMLAALGVPTEQGDPLDW HHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH MRRH HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA