| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119866233
Identifier: 119866233
GI number: 119866233
Start: 190190
End: 191326
Strand: Reverse
Name: 119866233
Synonym: Mkms_0177
Alternate gene names: NA
Gene position: 191326-190190 (Counterclockwise)
Preceding gene: 119866235
Following gene: 119866232
Centisome position: 3.33
GC content: 69.74
Gene sequence:
>1137_bases GTGTCCCACGACGCGACGGCGAACGACGCCAAGCGAGGACGGGCCGACCCCGACGGATCCACCCGCGGTAAGTACTGGTG GGTCCGCTGGGCGATCATCACCGTCGCGGTCGTCGTGCTCACCGTCGAAGTGGTCCTGGTGTGGGATCAGCTGGCGAAGG CGTGGAAGAGCCTCGTCTCCGCGAACTGGTGGTGGGTGGTCGCCGCCGTCGTCGCGTCCCTGGCCTCGATGCACAGCTTC GCGCAGATCCAGCGCACGCTTCTGCGCTCGGCCGGGGTGCACCTGAAGCAGTGGCGCTCGGAGGCGGCGTATTACGCGGG CAACGCGCTGAGCACCACGATGCCCGGTGGCCCGGTGCTCTCGGCGACGTTCCTCTACCGGCAGCAGCGGCTGTGGGGCG CGAGCCCGGTGGTGGCGTCATGGCAGCTGGTGATGTCCGGTGTGCTGCAGGGCGTCGGCCTGGCGTTGCTCGGCCTCGGC GGTGCGTTCATGCTCGGCGCGAGCAAGAACCCGCTGTCGTTGATCTTCACGCTGGGCGGCTTCGCCGCGCTGCTGGTGCT CGCGCAGGCAGTCGCGAGCCGGCCCGAGTTGATCGACGGTATCGGCGCACGGCTGCTGGCCCGGTTCAACTCGCTGCGCA ACAAACCCCTCGACACGGGTCTGGCGAAGTGGCGGGAACTGCTGCGGCAACTGGAGTCGGTGCAGCTGGGCCGACGCGAC CTCAGCATGGCGTTCGGGTGGTCGCTGTTCAACTGGATCGCCGACGTCGCCTGCCTGGCGTTCGCCTGTTACGCCGCGGG CGGTCACCCGTCGCTGGCCGGGCTCACCGTCGCCTACGCCGCCGCGCGTGCGGTCGGCACCATCCCCCTCATGCCGGGTG GGCTGCTGGTCGTGGAGGCGGTGCTGGTCCCGGGTCTGGTGTCGAGCGGGATGACGCTGGCCGGCGCGATCTCCGCGATG CTCATCTACCGGCTCGTCAGCTGGATCTTCCTGGCCGCCATCGGCTGGGTGGTGTTCTTCTTCGTGTTCCGCACCGAGAA GGACATCGACCCCGACGCGCCCGTGAAGGGTGCGCACAAGGCCGGCGAGCCGATCCGCAACCAGCCGCCCCGTTCCGCGC GCGAGGATCTGGGTTGA
Upstream 100 bases:
>100_bases ACCGGCGTCGGCGGACCGTAGGCGCAGAATCGCCCGGCCCGCGGCGGCGCGCCTGCGCGGGCAGGCGAATCGGTGCAGAC GCACCGTTACTCTGTAGTGC
Downstream 100 bases:
>100_bases CCTGTTCTCCGCCCGCGCCGAAACCGCTGTCAGCCCGATGTTCCTGGATGTGATGACCTATGCCGACCGTTGACCGCCGC ACCGCCGCACTCGCCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSHDATANDAKRGRADPDGSTRGKYWWVRWAIITVAVVVLTVEVVLVWDQLAKAWKSLVSANWWWVVAAVVASLASMHSF AQIQRTLLRSAGVHLKQWRSEAAYYAGNALSTTMPGGPVLSATFLYRQQRLWGASPVVASWQLVMSGVLQGVGLALLGLG GAFMLGASKNPLSLIFTLGGFAALLVLAQAVASRPELIDGIGARLLARFNSLRNKPLDTGLAKWRELLRQLESVQLGRRD LSMAFGWSLFNWIADVACLAFACYAAGGHPSLAGLTVAYAAARAVGTIPLMPGGLLVVEAVLVPGLVSSGMTLAGAISAM LIYRLVSWIFLAAIGWVVFFFVFRTEKDIDPDAPVKGAHKAGEPIRNQPPRSAREDLG
Sequences:
>Translated_378_residues MSHDATANDAKRGRADPDGSTRGKYWWVRWAIITVAVVVLTVEVVLVWDQLAKAWKSLVSANWWWVVAAVVASLASMHSF AQIQRTLLRSAGVHLKQWRSEAAYYAGNALSTTMPGGPVLSATFLYRQQRLWGASPVVASWQLVMSGVLQGVGLALLGLG GAFMLGASKNPLSLIFTLGGFAALLVLAQAVASRPELIDGIGARLLARFNSLRNKPLDTGLAKWRELLRQLESVQLGRRD LSMAFGWSLFNWIADVACLAFACYAAGGHPSLAGLTVAYAAARAVGTIPLMPGGLLVVEAVLVPGLVSSGMTLAGAISAM LIYRLVSWIFLAAIGWVVFFFVFRTEKDIDPDAPVKGAHKAGEPIRNQPPRSAREDLG >Mature_377_residues SHDATANDAKRGRADPDGSTRGKYWWVRWAIITVAVVVLTVEVVLVWDQLAKAWKSLVSANWWWVVAAVVASLASMHSFA QIQRTLLRSAGVHLKQWRSEAAYYAGNALSTTMPGGPVLSATFLYRQQRLWGASPVVASWQLVMSGVLQGVGLALLGLGG AFMLGASKNPLSLIFTLGGFAALLVLAQAVASRPELIDGIGARLLARFNSLRNKPLDTGLAKWRELLRQLESVQLGRRDL SMAFGWSLFNWIADVACLAFACYAAGGHPSLAGLTVAYAAARAVGTIPLMPGGLLVVEAVLVPGLVSSGMTLAGAISAML IYRLVSWIFLAAIGWVVFFFVFRTEKDIDPDAPVKGAHKAGEPIRNQPPRSAREDLG
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40592; Mature: 40461
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHDATANDAKRGRADPDGSTRGKYWWVRWAIITVAVVVLTVEVVLVWDQLAKAWKSLVS CCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ANWWWVVAAVVASLASMHSFAQIQRTLLRSAGVHLKQWRSEAAYYAGNALSTTMPGGPVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH SATFLYRQQRLWGASPVVASWQLVMSGVLQGVGLALLGLGGAFMLGASKNPLSLIFTLGG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHH FAALLVLAQAVASRPELIDGIGARLLARFNSLRNKPLDTGLAKWRELLRQLESVQLGRRD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LSMAFGWSLFNWIADVACLAFACYAAGGHPSLAGLTVAYAAARAVGTIPLMPGGLLVVEA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VLVPGLVSSGMTLAGAISAMLIYRLVSWIFLAAIGWVVFFFVFRTEKDIDPDAPVKGAHK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AGEPIRNQPPRSAREDLG CCCCCCCCCCCCHHHCCC >Mature Secondary Structure SHDATANDAKRGRADPDGSTRGKYWWVRWAIITVAVVVLTVEVVLVWDQLAKAWKSLVS CCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ANWWWVVAAVVASLASMHSFAQIQRTLLRSAGVHLKQWRSEAAYYAGNALSTTMPGGPVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH SATFLYRQQRLWGASPVVASWQLVMSGVLQGVGLALLGLGGAFMLGASKNPLSLIFTLGG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHH FAALLVLAQAVASRPELIDGIGARLLARFNSLRNKPLDTGLAKWRELLRQLESVQLGRRD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LSMAFGWSLFNWIADVACLAFACYAAGGHPSLAGLTVAYAAARAVGTIPLMPGGLLVVEA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VLVPGLVSSGMTLAGAISAMLIYRLVSWIFLAAIGWVVFFFVFRTEKDIDPDAPVKGAHK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AGEPIRNQPPRSAREDLG CCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA