| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119866100
Identifier: 119866100
GI number: 119866100
Start: 51544
End: 52149
Strand: Direct
Name: 119866100
Synonym: Mkms_0043
Alternate gene names: NA
Gene position: 51544-52149 (Clockwise)
Preceding gene: 119866098
Following gene: 119866101
Centisome position: 0.9
GC content: 62.87
Gene sequence:
>606_bases ATGGCAGGTCGACCCGAGCGCGCAGGCGTGACCAACGCCAGCATCAACACGGGGCGCCGCCAACGCCTTGACGCTCAACG CAACGTCCTCTCGATCCTGGAGGCAGCGAAGACAACCTTTGCGGACAGCGGTGTCGATGTTCCCGCTAGAACCATCACCG ACCTGGCCGGTGTGGGCGTGGGGACGCTTTACCGCCACTTCCCACGCAGATCCGATCTCATCCTCGCTGTCATCGAGCGC GAGATCGATGACTGCATCGAGGCAGCGCATGAGTTGACCGCACGCATGGAACCCCGCGATGCGTTGGTGGCCTGGGTCAG CCGATTCGCGGAGTTTGTGCGCACCAAACACGGCCTCGCGAACGCGCTGCATTCCGGAGATCCTGCCTACACCGGCCTGG CCGACACTCTGCTGGACCGTCTTGAGCCGGTCCTGGATTCGCTACTCGAACGGGTACCTCTGAACGTTCGAAACCGCGAC ACCGTGTCGGCACGCGACGTGCTGACCACGATTGCGCTCATGTGCCAACCGGTGCCCGGCGAAACGTCGTCCTTCAACGA ACGCATGACGAAGATCTTCCTTGAGGGTTTGCTGGCCTCCGGGTGA
Upstream 100 bases:
>100_bases GGGTTCGGTATCTCATCGTGTGCCTCCGTCTCAAGGTCGAACAGTATCTGGAACCTCTTTCCGGTAATATACGGAACGAT GTTCCATTAAGCTAGAGGCC
Downstream 100 bases:
>100_bases TCGCATCGCCACAGGTCGCGGCGTAGGAAGTGACGGTCGGGACTACCGCCGAAGGCCGTCCGATCCAGATCGCCCGGGTT AGCGAAACCGCGCACGCGCG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Tetr Family Transcriptional Regulator; TetR Family Protein Transcriptional Regulator; TetR/AcrR-Family Transcriptional Regulator; Transcription Regulator Protein; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcription Regulator; TetR-Family Protein Transcriptional Regulator; TetR-Type Regulator; Transcriptional Regulator Tetr Family; Transcription Regulator Protein Tetr Family; Transcriptional Regulator TetR; Regulatory Protein
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MAGRPERAGVTNASINTGRRQRLDAQRNVLSILEAAKTTFADSGVDVPARTITDLAGVGVGTLYRHFPRRSDLILAVIER EIDDCIEAAHELTARMEPRDALVAWVSRFAEFVRTKHGLANALHSGDPAYTGLADTLLDRLEPVLDSLLERVPLNVRNRD TVSARDVLTTIALMCQPVPGETSSFNERMTKIFLEGLLASG
Sequences:
>Translated_201_residues MAGRPERAGVTNASINTGRRQRLDAQRNVLSILEAAKTTFADSGVDVPARTITDLAGVGVGTLYRHFPRRSDLILAVIER EIDDCIEAAHELTARMEPRDALVAWVSRFAEFVRTKHGLANALHSGDPAYTGLADTLLDRLEPVLDSLLERVPLNVRNRD TVSARDVLTTIALMCQPVPGETSSFNERMTKIFLEGLLASG >Mature_200_residues AGRPERAGVTNASINTGRRQRLDAQRNVLSILEAAKTTFADSGVDVPARTITDLAGVGVGTLYRHFPRRSDLILAVIERE IDDCIEAAHELTARMEPRDALVAWVSRFAEFVRTKHGLANALHSGDPAYTGLADTLLDRLEPVLDSLLERVPLNVRNRDT VSARDVLTTIALMCQPVPGETSSFNERMTKIFLEGLLASG
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21977; Mature: 21846
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRPERAGVTNASINTGRRQRLDAQRNVLSILEAAKTTFADSGVDVPARTITDLAGVGV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCH GTLYRHFPRRSDLILAVIEREIDDCIEAAHELTARMEPRDALVAWVSRFAEFVRTKHGLA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH NALHSGDPAYTGLADTLLDRLEPVLDSLLERVPLNVRNRDTVSARDVLTTIALMCQPVPG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC ETSSFNERMTKIFLEGLLASG CCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AGRPERAGVTNASINTGRRQRLDAQRNVLSILEAAKTTFADSGVDVPARTITDLAGVGV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCH GTLYRHFPRRSDLILAVIEREIDDCIEAAHELTARMEPRDALVAWVSRFAEFVRTKHGLA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH NALHSGDPAYTGLADTLLDRLEPVLDSLLERVPLNVRNRDTVSARDVLTTIALMCQPVPG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC ETSSFNERMTKIFLEGLLASG CCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA