| Definition | Mycobacterium sp. KMS plasmid pMKMS02, complete sequence. |
|---|---|
| Accession | NC_008704 |
| Length | 216,763 |
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The map label for this gene is 119855261
Identifier: 119855261
GI number: 119855261
Start: 78935
End: 79336
Strand: Reverse
Name: 119855261
Synonym: Mkms_5875
Alternate gene names: NA
Gene position: 79336-78935 (Counterclockwise)
Preceding gene: 119855262
Following gene: 119855260
Centisome position: 36.6
GC content: 69.15
Gene sequence:
>402_bases ATGCATCGCCGTGGCGCGTCGATTGACGCGATCGCCGACCATCTGCGGGTCGCTAAGCGGTCGGTTCACCGCTACCTGGC GCTGGAGTGCCCGGAGCCGCCGCCTGCCGAGTCGGAGGTTAATCTCAGCGACTTCCACATGCAGGGTGCGTGTGGCGCGT TCCCGGAGCTGGATTGGACCAGTCGCAGCAAGTTTGAGCAGGCCGAATGCAAGGCGGTGTGCGCGCACTGCCCGGTGCTG GCGCAGTGCCGCACCTGGGGGTTGACCAAGGGCCGCGACGAGTGCGGCGTCTGGGGTGGACTGTCCAAAGAGGAACGCCG TCGCCAGGCGGGGCGCAATCAGCGCACCAAGACCGGCCAGCGGCCCGACGTGGTGGCCGTCCGCGGGCAGGGGGCGGCAT GA
Upstream 100 bases:
>100_bases GGCTCCTGCGAGAGACGAACGTGATGGGGGATAAGTCATGACAGAGACTGTCGGACACCATAATCCGCGGTGGATCAGCC ATCGCATCACCGCGCACAAG
Downstream 100 bases:
>100_bases GCAGCGCCGTGGTCGAGGTCAGCGCGGCGGCCGTCTCCGCCCGCGGGTCCTACATTGATGCGCTCAGCGTCGACGAGCTG TTCGTTGACCCGTCTTATCA
Product: transcription factor WhiB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MHRRGASIDAIADHLRVAKRSVHRYLALECPEPPPAESEVNLSDFHMQGACGAFPELDWTSRSKFEQAECKAVCAHCPVL AQCRTWGLTKGRDECGVWGGLSKEERRRQAGRNQRTKTGQRPDVVAVRGQGAA
Sequences:
>Translated_133_residues MHRRGASIDAIADHLRVAKRSVHRYLALECPEPPPAESEVNLSDFHMQGACGAFPELDWTSRSKFEQAECKAVCAHCPVL AQCRTWGLTKGRDECGVWGGLSKEERRRQAGRNQRTKTGQRPDVVAVRGQGAA >Mature_133_residues MHRRGASIDAIADHLRVAKRSVHRYLALECPEPPPAESEVNLSDFHMQGACGAFPELDWTSRSKFEQAECKAVCAHCPVL AQCRTWGLTKGRDECGVWGGLSKEERRRQAGRNQRTKTGQRPDVVAVRGQGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14711; Mature: 14711
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRRGASIDAIADHLRVAKRSVHRYLALECPEPPPAESEVNLSDFHMQGACGAFPELDWT CCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC SRSKFEQAECKAVCAHCPVLAQCRTWGLTKGRDECGVWGGLSKEERRRQAGRNQRTKTGQ CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC RPDVVAVRGQGAA CCCEEEECCCCCC >Mature Secondary Structure MHRRGASIDAIADHLRVAKRSVHRYLALECPEPPPAESEVNLSDFHMQGACGAFPELDWT CCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC SRSKFEQAECKAVCAHCPVLAQCRTWGLTKGRDECGVWGGLSKEERRRQAGRNQRTKTGQ CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC RPDVVAVRGQGAA CCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA