| Definition | Mycobacterium sp. KMS plasmid pMKMS02, complete sequence. |
|---|---|
| Accession | NC_008704 |
| Length | 216,763 |
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The map label for this gene is 119855183
Identifier: 119855183
GI number: 119855183
Start: 5103
End: 8033
Strand: Reverse
Name: 119855183
Synonym: Mkms_5796
Alternate gene names: NA
Gene position: 8033-5103 (Counterclockwise)
Preceding gene: 119855184
Following gene: 119855182
Centisome position: 3.71
GC content: 67.45
Gene sequence:
>2931_bases ATGGATCCGCGCTTTGAGCGAAACGTCGCTGCGCTGGAGGCGGTGCAGCCACCCTGGCTGAGCCGCGAAGACATTCGCGT TGAACTGGGCTCACCGTGGATCACCGCCGGCGACGTCGCCGACTTCTGCGCTGAGGTGTTTGGGGCGCGGGCCGGTGTCG ATCATGTGGCGCCGCTGGCAGCGTGGGAGGTGAGTGCGCGTGGCCAGATCTCGCCGGAGGCGCGGATCGCCTACTGCACC GACCGCATGGATGCGATCGACCTGCTGCAGATCGGACTCAACGGCGCCGCTCCGGTCGTGTGGGATGAGTTCTACGACCA GCAGACGCACACGCGGCGCAAGGTCCGCAACGCCGATGCCACCGAGGCCGCCGAACTGAAGCTCGCCGCGATCCAACAGC GGTTCTCGCTGTGGGTGTGGGAGAACGCCGACCGGGAACGGCGCATCGTCGAGCAGTACAACCAGACCATGAACGCGCAC GTGCTGCGCAATCATGACGGGTCGCATCTGACGTTCCCAGGCCTGGCCGACGGCATCGCGTTATGGCCGTGGCAACGTGA CTTCGTTGACCGTGCGGTTTCCACGCCCGCGGTTTTCTGTGCGCACGAAGTCGGGCTCGGAAAGACGCTCACGGCAATCA CGTTGGCAATGACGTTGCGGCAGTTCGGATTGGCGAACCGTCCGGCGTTGATCGTTCCCCTGCATCTGATCGAGCAGGCA ACCCGCCAGTGCTACCAGGCGTGGCCGGCGGGCCGGTTCCTGATTGTGACGCGTGAGGATTTACACGGTGATGCACGGCG CCGGTTCGTGGCGCGCTGCGCGACGGGGGATTGGGATCTGGTGATCATGACCCACGAAACGTTTTCCTCGCTGCCGGTCC CCGGCAATGCGGAGCGTGATTGGCTAGAAGACCAGCTCGGCGAACTCGAAAATTATGCCCGCACTGAGGGTTACACCGGC AAGCGGATCGCCGCCGCGGTGCGGTCCCTGCAGGGCCGACTCGAGAAGCTGCGCGCGTCGGTCAACGACCCCAAGGCGGT CACGTTCAAGAGCCTGGGAATCGATTATCTGATCGTCGACGAGGCGGACAAGTTCCGCCGGCTGCCGGTGACCACCCGCG CAGACGGGTTTAGCCTCGGCTCGTCGAAACGGGCCCTGGACCTGTTTCTCAAGGTGTCGCTGCTGCGGCGGGCCAACCCG GATCGGCCGCATGCCTGCCTTTTGACGGGAACGCCGTTCACCAACACGCTCGCCGAAGGGTTTGTGTGGCAGAGCATGCT TGCCCCCGAGCAGCTGGCGCGCACGGGGTTGGGGCACTTCGACGCGTGGGCGGCCCAGTTCGTGCGGTACAAGGTGCTGA TCGAGACCAGCCCAGACGGGTCGGGGTTCCGGTCGCGGCGCCGGCCGGGCACCATCCAAAACGTGCCCGAGCTGCGCACG ATGCTCTCGGAGTTCATGTCGATGGTGCGGGCCGACAGCGTAGGTCTGCCGCGACCGCAGGTGCAGAACCATACCCATCT GAGCGAACCGACCGACGCGCAGCGCGAATTCATGGCACACCTGGTGACGCGGGCCGACGCGCTGCGGGCCCGGATGCCCT CGGCCGAGTCGGACAACATGCTGCTGATCTGCGGTGACGGGCGCAAGGTGGCGCTGGACCCGAACCTGGTCGGAATCCGC GAGGAAGCGCCCAAGCTCGATGGCGTGGCCGCGGCGGTAGCCGACATCTACCACCGCACCCGGCATCTGACGTACTCCGG ATCGACAACGCCCGGGGCGTTCCAACTGGTGATGTGCGACATGGGCACACCGAAGAAGGGCGACGCACAAAGCTACGGGC GGATCCGGGCGGGACTGATCGCGCGCGGGGTGCCGGCCGAGCAGATCCGATTCGTGCACGAAGCGACCACGGCCAAGGCC CGAGAGGCGCTATTCGCAGCATGCCGGGACGGCCGGGTTGCGGTGCTGCTGGGCTCGACGCCCAAGGTCGGCATCGGGAC CAACGTGCAGAACAGGCTGCACTCGCTACACCACGTGGACCCGACGTGGACGGCCGCGGCGTGGGAGCAGCGCAACGGGC GCATCCAGCGCAACGGCAACCAGCACGCTACGGCCGAAATCCATTCGCACGTAGCGCGGGGAACGTTCGACGCGTTCATG TTCGGCACTGTGGAGCGCAAAGCCCGAGGTTTCGCGCAGCTGTACCGGATGGACGGCCAGGCCCGCGAAATCGAGGACAT CGGTGACGAGGTACTGACGTTCGGTGAACTCAAGGCCGCCGCGGCGGGCAACGATCTCTTGCTGCGGCAGCATGAGCTGG AAAGCCGGGTCCGGGCGCTGCGGTTGGCGCACGTGACCGTCCAGCAGAACGTGCGGACGCTGCTGCATCAGGCCGCGGCC GCGGACACCGCCGCCGAGGCCGCGGCAGCACGCGTCCAGCGGTTGCAGGCCTTCGCCGAGCACCGCGACGGCATGCGGGA GATGGACATGACCAGGGTCGCCGCCGACGCCTGCACGGTCCGGGATCCGGCGGCCTACCGCTCGCGGTACCGAGCAGAGT GCGGCGATCACCGGGTATCGGTGCGCGTTGTGGATACCGACCCTGGACAGCGTTTGGAGCTGGCCTTCGACTACCGCGTG CTGTGGGCCGAACCGCTACCTGGCAAGGTGCGCCGTCGCGGCGCCGAGGCGGTCAAAGCCTGGGCGGAGGCGATGGTGGC AGCGTGGGTCGCAGGCGTCGATCGCGAGATCGTTGCGACGCAAAGCCGCGTCGAGGAATCCCGGCGGCGCGCCCAGGACG CCCGCACCGCCGCGGCGGCCACCAACACCGGAGAGCCGGCCGATCTGCTCGCAGCCCGCGCCGAGTTGGTCGAGGTCAAT AGGGCCATCGACGACGCGCTGAAAGGGGAAAGCCGGCCCGCCGCAGCGTAG
Upstream 100 bases:
>100_bases TGGTGTTCCGGGACCCCGAGACGGCGCAGCAGTCACCGCCCGCGACTACCTGTGCGGTGACGTGCGGGCGAAGCTGCGCG AGGCGTTGACAGCTGCAGCG
Downstream 100 bases:
>100_bases CGGGGCAACCGAACGCTCAGGGGTGGTCTTCGCGGGTATGCCCCGTGAAGATCACCCCAGCCCCGTCGCCGCCGCGCGAG GTTACCGGCAACCCGGCCCC
Product: helicase domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 976; Mature: 976
Protein sequence:
>976_residues MDPRFERNVAALEAVQPPWLSREDIRVELGSPWITAGDVADFCAEVFGARAGVDHVAPLAAWEVSARGQISPEARIAYCT DRMDAIDLLQIGLNGAAPVVWDEFYDQQTHTRRKVRNADATEAAELKLAAIQQRFSLWVWENADRERRIVEQYNQTMNAH VLRNHDGSHLTFPGLADGIALWPWQRDFVDRAVSTPAVFCAHEVGLGKTLTAITLAMTLRQFGLANRPALIVPLHLIEQA TRQCYQAWPAGRFLIVTREDLHGDARRRFVARCATGDWDLVIMTHETFSSLPVPGNAERDWLEDQLGELENYARTEGYTG KRIAAAVRSLQGRLEKLRASVNDPKAVTFKSLGIDYLIVDEADKFRRLPVTTRADGFSLGSSKRALDLFLKVSLLRRANP DRPHACLLTGTPFTNTLAEGFVWQSMLAPEQLARTGLGHFDAWAAQFVRYKVLIETSPDGSGFRSRRRPGTIQNVPELRT MLSEFMSMVRADSVGLPRPQVQNHTHLSEPTDAQREFMAHLVTRADALRARMPSAESDNMLLICGDGRKVALDPNLVGIR EEAPKLDGVAAAVADIYHRTRHLTYSGSTTPGAFQLVMCDMGTPKKGDAQSYGRIRAGLIARGVPAEQIRFVHEATTAKA REALFAACRDGRVAVLLGSTPKVGIGTNVQNRLHSLHHVDPTWTAAAWEQRNGRIQRNGNQHATAEIHSHVARGTFDAFM FGTVERKARGFAQLYRMDGQAREIEDIGDEVLTFGELKAAAAGNDLLLRQHELESRVRALRLAHVTVQQNVRTLLHQAAA ADTAAEAAAARVQRLQAFAEHRDGMREMDMTRVAADACTVRDPAAYRSRYRAECGDHRVSVRVVDTDPGQRLELAFDYRV LWAEPLPGKVRRRGAEAVKAWAEAMVAAWVAGVDREIVATQSRVEESRRRAQDARTAAAATNTGEPADLLAARAELVEVN RAIDDALKGESRPAAA
Sequences:
>Translated_976_residues MDPRFERNVAALEAVQPPWLSREDIRVELGSPWITAGDVADFCAEVFGARAGVDHVAPLAAWEVSARGQISPEARIAYCT DRMDAIDLLQIGLNGAAPVVWDEFYDQQTHTRRKVRNADATEAAELKLAAIQQRFSLWVWENADRERRIVEQYNQTMNAH VLRNHDGSHLTFPGLADGIALWPWQRDFVDRAVSTPAVFCAHEVGLGKTLTAITLAMTLRQFGLANRPALIVPLHLIEQA TRQCYQAWPAGRFLIVTREDLHGDARRRFVARCATGDWDLVIMTHETFSSLPVPGNAERDWLEDQLGELENYARTEGYTG KRIAAAVRSLQGRLEKLRASVNDPKAVTFKSLGIDYLIVDEADKFRRLPVTTRADGFSLGSSKRALDLFLKVSLLRRANP DRPHACLLTGTPFTNTLAEGFVWQSMLAPEQLARTGLGHFDAWAAQFVRYKVLIETSPDGSGFRSRRRPGTIQNVPELRT MLSEFMSMVRADSVGLPRPQVQNHTHLSEPTDAQREFMAHLVTRADALRARMPSAESDNMLLICGDGRKVALDPNLVGIR EEAPKLDGVAAAVADIYHRTRHLTYSGSTTPGAFQLVMCDMGTPKKGDAQSYGRIRAGLIARGVPAEQIRFVHEATTAKA REALFAACRDGRVAVLLGSTPKVGIGTNVQNRLHSLHHVDPTWTAAAWEQRNGRIQRNGNQHATAEIHSHVARGTFDAFM FGTVERKARGFAQLYRMDGQAREIEDIGDEVLTFGELKAAAAGNDLLLRQHELESRVRALRLAHVTVQQNVRTLLHQAAA ADTAAEAAAARVQRLQAFAEHRDGMREMDMTRVAADACTVRDPAAYRSRYRAECGDHRVSVRVVDTDPGQRLELAFDYRV LWAEPLPGKVRRRGAEAVKAWAEAMVAAWVAGVDREIVATQSRVEESRRRAQDARTAAAATNTGEPADLLAARAELVEVN RAIDDALKGESRPAAA >Mature_976_residues MDPRFERNVAALEAVQPPWLSREDIRVELGSPWITAGDVADFCAEVFGARAGVDHVAPLAAWEVSARGQISPEARIAYCT DRMDAIDLLQIGLNGAAPVVWDEFYDQQTHTRRKVRNADATEAAELKLAAIQQRFSLWVWENADRERRIVEQYNQTMNAH VLRNHDGSHLTFPGLADGIALWPWQRDFVDRAVSTPAVFCAHEVGLGKTLTAITLAMTLRQFGLANRPALIVPLHLIEQA TRQCYQAWPAGRFLIVTREDLHGDARRRFVARCATGDWDLVIMTHETFSSLPVPGNAERDWLEDQLGELENYARTEGYTG KRIAAAVRSLQGRLEKLRASVNDPKAVTFKSLGIDYLIVDEADKFRRLPVTTRADGFSLGSSKRALDLFLKVSLLRRANP DRPHACLLTGTPFTNTLAEGFVWQSMLAPEQLARTGLGHFDAWAAQFVRYKVLIETSPDGSGFRSRRRPGTIQNVPELRT MLSEFMSMVRADSVGLPRPQVQNHTHLSEPTDAQREFMAHLVTRADALRARMPSAESDNMLLICGDGRKVALDPNLVGIR EEAPKLDGVAAAVADIYHRTRHLTYSGSTTPGAFQLVMCDMGTPKKGDAQSYGRIRAGLIARGVPAEQIRFVHEATTAKA REALFAACRDGRVAVLLGSTPKVGIGTNVQNRLHSLHHVDPTWTAAAWEQRNGRIQRNGNQHATAEIHSHVARGTFDAFM FGTVERKARGFAQLYRMDGQAREIEDIGDEVLTFGELKAAAAGNDLLLRQHELESRVRALRLAHVTVQQNVRTLLHQAAA ADTAAEAAAARVQRLQAFAEHRDGMREMDMTRVAADACTVRDPAAYRSRYRAECGDHRVSVRVVDTDPGQRLELAFDYRV LWAEPLPGKVRRRGAEAVKAWAEAMVAAWVAGVDREIVATQSRVEESRRRAQDARTAAAATNTGEPADLLAARAELVEVN RAIDDALKGESRPAAA
Specific function: Unknown
COG id: COG4646
COG function: function code KL; DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 108086; Mature: 108086
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPRFERNVAALEAVQPPWLSREDIRVELGSPWITAGDVADFCAEVFGARAGVDHVAPLA CCCCHHCCHHHHHHCCCCCCCCCCCEEEECCCCEECCHHHHHHHHHHHCCCCCHHHCHHH AWEVSARGQISPEARIAYCTDRMDAIDLLQIGLNGAAPVVWDEFYDQQTHTRRKVRNADA HEEECCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC TEAAELKLAAIQQRFSLWVWENADRERRIVEQYNQTMNAHVLRNHDGSHLTFPGLADGIA HHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCCE LWPWQRDFVDRAVSTPAVFCAHEVGLGKTLTAITLAMTLRQFGLANRPALIVPLHLIEQA ECCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH TRQCYQAWPAGRFLIVTREDLHGDARRRFVARCATGDWDLVIMTHETFSSLPVPGNAERD HHHHHHHCCCCEEEEEECHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHH WLEDQLGELENYARTEGYTGKRIAAAVRSLQGRLEKLRASVNDPKAVTFKSLGIDYLIVD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHCCCCEEEEC EADKFRRLPVTTRADGFSLGSSKRALDLFLKVSLLRRANPDRPHACLLTGTPFTNTLAEG CCHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHH FVWQSMLAPEQLARTGLGHFDAWAAQFVRYKVLIETSPDGSGFRSRRRPGTIQNVPELRT HHHHHHCCHHHHHHHCCCHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHH MLSEFMSMVRADSVGLPRPQVQNHTHLSEPTDAQREFMAHLVTRADALRARMPSAESDNM HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LLICGDGRKVALDPNLVGIREEAPKLDGVAAAVADIYHRTRHLTYSGSTTPGAFQLVMCD EEEECCCCEEEECCCEEECHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEC MGTPKKGDAQSYGRIRAGLIARGVPAEQIRFVHEATTAKAREALFAACRDGRVAVLLGST CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC PKVGIGTNVQNRLHSLHHVDPTWTAAAWEQRNGRIQRNGNQHATAEIHSHVARGTFDAFM CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCHHHHH FGTVERKARGFAQLYRMDGQAREIEDIGDEVLTFGELKAAAAGNDLLLRQHELESRVRAL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RLAHVTVQQNVRTLLHQAAAADTAAEAAAARVQRLQAFAEHRDGMREMDMTRVAADACTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC RDPAAYRSRYRAECGDHRVSVRVVDTDPGQRLELAFDYRVLWAEPLPGKVRRRGAEAVKA CCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHH WAEAMVAAWVAGVDREIVATQSRVEESRRRAQDARTAAAATNTGEPADLLAARAELVEVN HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RAIDDALKGESRPAAA HHHHHHHCCCCCCCCC >Mature Secondary Structure MDPRFERNVAALEAVQPPWLSREDIRVELGSPWITAGDVADFCAEVFGARAGVDHVAPLA CCCCHHCCHHHHHHCCCCCCCCCCCEEEECCCCEECCHHHHHHHHHHHCCCCCHHHCHHH AWEVSARGQISPEARIAYCTDRMDAIDLLQIGLNGAAPVVWDEFYDQQTHTRRKVRNADA HEEECCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC TEAAELKLAAIQQRFSLWVWENADRERRIVEQYNQTMNAHVLRNHDGSHLTFPGLADGIA HHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCCE LWPWQRDFVDRAVSTPAVFCAHEVGLGKTLTAITLAMTLRQFGLANRPALIVPLHLIEQA ECCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH TRQCYQAWPAGRFLIVTREDLHGDARRRFVARCATGDWDLVIMTHETFSSLPVPGNAERD HHHHHHHCCCCEEEEEECHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHH WLEDQLGELENYARTEGYTGKRIAAAVRSLQGRLEKLRASVNDPKAVTFKSLGIDYLIVD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHCCCCEEEEC EADKFRRLPVTTRADGFSLGSSKRALDLFLKVSLLRRANPDRPHACLLTGTPFTNTLAEG CCHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHH FVWQSMLAPEQLARTGLGHFDAWAAQFVRYKVLIETSPDGSGFRSRRRPGTIQNVPELRT HHHHHHCCHHHHHHHCCCHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHH MLSEFMSMVRADSVGLPRPQVQNHTHLSEPTDAQREFMAHLVTRADALRARMPSAESDNM HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LLICGDGRKVALDPNLVGIREEAPKLDGVAAAVADIYHRTRHLTYSGSTTPGAFQLVMCD EEEECCCCEEEECCCEEECHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEC MGTPKKGDAQSYGRIRAGLIARGVPAEQIRFVHEATTAKAREALFAACRDGRVAVLLGST CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC PKVGIGTNVQNRLHSLHHVDPTWTAAAWEQRNGRIQRNGNQHATAEIHSHVARGTFDAFM CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCHHHHH FGTVERKARGFAQLYRMDGQAREIEDIGDEVLTFGELKAAAAGNDLLLRQHELESRVRAL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RLAHVTVQQNVRTLLHQAAAADTAAEAAAARVQRLQAFAEHRDGMREMDMTRVAADACTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC RDPAAYRSRYRAECGDHRVSVRVVDTDPGQRLELAFDYRVLWAEPLPGKVRRRGAEAVKA CCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHH WAEAMVAAWVAGVDREIVATQSRVEESRRRAQDARTAAAATNTGEPADLLAARAELVEVN HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RAIDDALKGESRPAAA HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA