| Definition | Mycobacterium sp. KMS plasmid pMKMS02, complete sequence. |
|---|---|
| Accession | NC_008704 |
| Length | 216,763 |
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The map label for this gene is 119855180
Identifier: 119855180
GI number: 119855180
Start: 2676
End: 3515
Strand: Reverse
Name: 119855180
Synonym: Mkms_5793
Alternate gene names: NA
Gene position: 3515-2676 (Counterclockwise)
Preceding gene: 119855181
Following gene: 119855179
Centisome position: 1.62
GC content: 66.19
Gene sequence:
>840_bases ATGACCGCAGCAATGATTGATCAGGTTTCACCGACGATCGACCACGATGGGGAGGTCGACTGGCGCGCGCTGCTCGAACA GGCGATGACGATGCCGGGCCGCCTCGGCGACACCTATTGCCGGTTTCACCAGTACTCGTTGGCCAATCAGCTGCTGCTGT GGTCGCAGGGTGTGACCGAGCGGTGTGCACCGTTCAAGGTGTGGAAGGCGTTGGGCCGCATTCCGGTCAAGGGCGGCGCC CGTTTCGTGCGGCACCCGCGCCCCGTGTACGAAAAGGATGCGGAGACCGGTGAGCGGGTCGTCAAGTTCGTCCGGTTCGT GCTGCGGCGCAGCACCTTCCCGTACTCCAACACCGTGGGCCCGGAGATCGAGTGGCCGGAGCTGCCCGAGTGGGACGCGC AGCGCGCGCTGGCCGCTCTGGACATCACCCAGGTGCCCTACGCCATGATCGACGGCAACTGCCAGGGCTACTCCTACCAG CGCAACGTAGCGGTCAGCCCCATGGCGAAATTCGCGCTCAAGACCTTGTTCCACGAAATCGGGCATGTGATGCTGGGGCA CACCAGCGACAGCGCCGACGGGGAGAGCGCGTGCAGCCGCGGTGTCGGCGAGTTTCAGGCCGAATCGGTGGCCTACCTGC TGGCGCACGAACTCGAGTTGAGCGAGTGGGCCCCGGAAGAATCCCGCGCCTACATCCAGCACTGGCTGGGCGATGAGCAG GTGACCGATGGCCACATCCGCGCGGTGTTCACCGCGGTCGACAAGATCCTGAGGGCCGGCCGAACGCCGGCCGGTGAGGA CGTCGACGACCAGGACGCCGCCGCGGCGATCGCCTCCTAA
Upstream 100 bases:
>100_bases TGGACGTCGCCGGCGGGAACTTGTCGGTGGGGGTGGGTAGTGTTGCTGATGTAGGGCAGGCCAGTTGGGGCCGGCCCCGA ACTCCCGGAAGGGGAATGTC
Downstream 100 bases:
>100_bases GCCGCGGGCCGCGCGGCGCGCACCGGAGGAGCCCCCAACACGCCTCCGGCTGCAGCGCCGCGGCCCGCACCCCCAGTGCC CCGCCGGCCAACCCCTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTAAMIDQVSPTIDHDGEVDWRALLEQAMTMPGRLGDTYCRFHQYSLANQLLLWSQGVTERCAPFKVWKALGRIPVKGGA RFVRHPRPVYEKDAETGERVVKFVRFVLRRSTFPYSNTVGPEIEWPELPEWDAQRALAALDITQVPYAMIDGNCQGYSYQ RNVAVSPMAKFALKTLFHEIGHVMLGHTSDSADGESACSRGVGEFQAESVAYLLAHELELSEWAPEESRAYIQHWLGDEQ VTDGHIRAVFTAVDKILRAGRTPAGEDVDDQDAAAAIAS
Sequences:
>Translated_279_residues MTAAMIDQVSPTIDHDGEVDWRALLEQAMTMPGRLGDTYCRFHQYSLANQLLLWSQGVTERCAPFKVWKALGRIPVKGGA RFVRHPRPVYEKDAETGERVVKFVRFVLRRSTFPYSNTVGPEIEWPELPEWDAQRALAALDITQVPYAMIDGNCQGYSYQ RNVAVSPMAKFALKTLFHEIGHVMLGHTSDSADGESACSRGVGEFQAESVAYLLAHELELSEWAPEESRAYIQHWLGDEQ VTDGHIRAVFTAVDKILRAGRTPAGEDVDDQDAAAAIAS >Mature_278_residues TAAMIDQVSPTIDHDGEVDWRALLEQAMTMPGRLGDTYCRFHQYSLANQLLLWSQGVTERCAPFKVWKALGRIPVKGGAR FVRHPRPVYEKDAETGERVVKFVRFVLRRSTFPYSNTVGPEIEWPELPEWDAQRALAALDITQVPYAMIDGNCQGYSYQR NVAVSPMAKFALKTLFHEIGHVMLGHTSDSADGESACSRGVGEFQAESVAYLLAHELELSEWAPEESRAYIQHWLGDEQV TDGHIRAVFTAVDKILRAGRTPAGEDVDDQDAAAAIAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31095; Mature: 30964
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAMIDQVSPTIDHDGEVDWRALLEQAMTMPGRLGDTYCRFHQYSLANQLLLWSQGVTE CCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH RCAPFKVWKALGRIPVKGGARFVRHPRPVYEKDAETGERVVKFVRFVLRRSTFPYSNTVG HHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC PEIEWPELPEWDAQRALAALDITQVPYAMIDGNCQGYSYQRNVAVSPMAKFALKTLFHEI CCCCCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GHVMLGHTSDSADGESACSRGVGEFQAESVAYLLAHELELSEWAPEESRAYIQHWLGDEQ HHHEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC VTDGHIRAVFTAVDKILRAGRTPAGEDVDDQDAAAAIAS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure TAAMIDQVSPTIDHDGEVDWRALLEQAMTMPGRLGDTYCRFHQYSLANQLLLWSQGVTE CCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH RCAPFKVWKALGRIPVKGGARFVRHPRPVYEKDAETGERVVKFVRFVLRRSTFPYSNTVG HHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC PEIEWPELPEWDAQRALAALDITQVPYAMIDGNCQGYSYQRNVAVSPMAKFALKTLFHEI CCCCCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GHVMLGHTSDSADGESACSRGVGEFQAESVAYLLAHELELSEWAPEESRAYIQHWLGDEQ HHHEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC VTDGHIRAVFTAVDKILRAGRTPAGEDVDDQDAAAAIAS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA