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The map label for this gene is iap [H]

Identifier: 119855107

GI number: 119855107

Start: 230110

End: 230883

Strand: Reverse

Name: iap [H]

Synonym: Mkms_5720

Alternate gene names: 119855107

Gene position: 230883-230110 (Counterclockwise)

Preceding gene: 119855108

Following gene: 119855103

Centisome position: 76.43

GC content: 65.89

Gene sequence:

>774_bases
ATGGAATCACACGTCCGGAGCAAGGGTGCTCCAACTGCCCGCGCTGACCGCTGCGACCCCACAATCCTTGTAGCAGCACA
GGCGGTTCGGCGGCTCTCCGGTGTGATCGCCATCGTCGTCTTGCTTTTCCTTGCGTGCGCACCGGTCGCGTCGGCCCAAC
CTGCCGCCGGCCCTTGGGATCCACTGCTTCCTAAGGTGGCGAGCGCAGGCGCTCCCGGTGATCCGGTTGCCATCGCGAAC
GCCTCTCTTCAGGCAACGGCCATGGCGACGCAGACCGCCATGAGCATGGGTCGCAACTTCCTCAGCAGCCTGGGGCTCGT
CAGTCCCGCCGCGGATCCGTCGACGAGCGTGCGCGGAAACCGGGTCAATGGTGCGCAAGCGATCGAGTACGTAATCCGGA
GGGCGGGAACGCAAATCGGCGTTCCCTACTCCTGGGGTGGCGGAAGCCTCACCGGTCCCAGCCGCGGCGTCGACCAGGGG
GCAGGCACCGTCGGCTTTGACTGTTCAGGCCTGACACGGTTCGCCTTCGCCGGCGTTGGAGTTCTGCTCCCGCGATGGTC
CGGTGATCAGTACGACGCCGGCCGCAAGGTGCCACCCTCCCAAGCGAAGCGGGGCGATCTGCTGTTCTGGGGCCCGGGCG
GGAGCCAGCACGAAGCTATCTATCTCGGCGGCGGGCAGATGCTCGAGGCACAGCAGACCGGCGTGCCAATCAAGATCTCC
CCAGTGCGCACGTCAGGGATGACGCCCTACGTCGTTCGCATCATCGAAAGCTAA

Upstream 100 bases:

>100_bases
CGTAGGAGCTACGTATTTTGGTGCTGCGCCGTACTTATGCGATTCAGCCCCGCTATTGGTGCGTGTGATAGCTCACCGCG
CGGCGCACCGAGGAGAAGAC

Downstream 100 bases:

>100_bases
GTCCTCGCCGCAATCTGTCACCAGCTGCATCACTGCGGCGCACCAGGCACTCGCTGCCCCCACTTAGCCGGTCAGACAGT
AACCGGTCCCGCGCACCGTA

Product: NLP/P60 protein

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MESHVRSKGAPTARADRCDPTILVAAQAVRRLSGVIAIVVLLFLACAPVASAQPAAGPWDPLLPKVASAGAPGDPVAIAN
ASLQATAMATQTAMSMGRNFLSSLGLVSPAADPSTSVRGNRVNGAQAIEYVIRRAGTQIGVPYSWGGGSLTGPSRGVDQG
AGTVGFDCSGLTRFAFAGVGVLLPRWSGDQYDAGRKVPPSQAKRGDLLFWGPGGSQHEAIYLGGGQMLEAQQTGVPIKIS
PVRTSGMTPYVVRIIES

Sequences:

>Translated_257_residues
MESHVRSKGAPTARADRCDPTILVAAQAVRRLSGVIAIVVLLFLACAPVASAQPAAGPWDPLLPKVASAGAPGDPVAIAN
ASLQATAMATQTAMSMGRNFLSSLGLVSPAADPSTSVRGNRVNGAQAIEYVIRRAGTQIGVPYSWGGGSLTGPSRGVDQG
AGTVGFDCSGLTRFAFAGVGVLLPRWSGDQYDAGRKVPPSQAKRGDLLFWGPGGSQHEAIYLGGGQMLEAQQTGVPIKIS
PVRTSGMTPYVVRIIES
>Mature_257_residues
MESHVRSKGAPTARADRCDPTILVAAQAVRRLSGVIAIVVLLFLACAPVASAQPAAGPWDPLLPKVASAGAPGDPVAIAN
ASLQATAMATQTAMSMGRNFLSSLGLVSPAADPSTSVRGNRVNGAQAIEYVIRRAGTQIGVPYSWGGGSLTGPSRGVDQG
AGTVGFDCSGLTRFAFAGVGVLLPRWSGDQYDAGRKVPPSQAKRGDLLFWGPGGSQHEAIYLGGGQMLEAQQTGVPIKIS
PVRTSGMTPYVVRIIES

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1786421, Length=118, Percent_Identity=37.2881355932203, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787944, Length=184, Percent_Identity=27.7173913043478, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 26378; Mature: 26378

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESHVRSKGAPTARADRCDPTILVAAQAVRRLSGVIAIVVLLFLACAPVASAQPAAGPWD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PLLPKVASAGAPGDPVAIANASLQATAMATQTAMSMGRNFLSSLGLVSPAADPSTSVRGN
HHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
RVNGAQAIEYVIRRAGTQIGVPYSWGGGSLTGPSRGVDQGAGTVGFDCSGLTRFAFAGVG
CCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCH
VLLPRWSGDQYDAGRKVPPSQAKRGDLLFWGPGGSQHEAIYLGGGQMLEAQQTGVPIKIS
HEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEHHHCCCCEEEE
PVRTSGMTPYVVRIIES
CCCCCCCCCEEEEEECC
>Mature Secondary Structure
MESHVRSKGAPTARADRCDPTILVAAQAVRRLSGVIAIVVLLFLACAPVASAQPAAGPWD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PLLPKVASAGAPGDPVAIANASLQATAMATQTAMSMGRNFLSSLGLVSPAADPSTSVRGN
HHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
RVNGAQAIEYVIRRAGTQIGVPYSWGGGSLTGPSRGVDQGAGTVGFDCSGLTRFAFAGVG
CCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCH
VLLPRWSGDQYDAGRKVPPSQAKRGDLLFWGPGGSQHEAIYLGGGQMLEAQQTGVPIKIS
HEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEHHHCCCCEEEE
PVRTSGMTPYVVRIIES
CCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1514809; 1459966 [H]