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The map label for this gene is yafL [C]

Identifier: 119855103

GI number: 119855103

Start: 225852

End: 227261

Strand: Reverse

Name: yafL [C]

Synonym: Mkms_5716

Alternate gene names: 119855103

Gene position: 227261-225852 (Counterclockwise)

Preceding gene: 119855107

Following gene: 119855102

Centisome position: 75.23

GC content: 65.6

Gene sequence:

>1410_bases
ATGCGGCGCCTCACTTCACTTCTCATCGCCGGGGTACTTGCGTCAATGCTGGTGCTGCACACCTCGGGCGTCGCAACGGC
CGGCCACGGAAGCGAACCTGATGGTGACAGCGAAACGGTCGCAGGACTTGTCGCCGCCGTCGCCGAGGTCAACCAGCACG
TCGCCGATATCGGCGCGGACATCCAACACAAGCAGGAGAGCGTCAATCGGGCCCTGGTTGAGCTTGCCACCGCCCGCGAG
GCGGTCTCCGAGGCGCACCGCAGACTCGCCGACAGCGAGAAAGCACTCGCCGACAGCCAAACCGCCATCGACGCGACGCA
GCAGCGTTTCGACGAGTTCGCCGCCTCGACCTATATGAACGGTCCCTCGCGCTCACTGCCGCTGGCAAGCAGCCCTGAAG
ACATCCTCTCGGCAGCCTCGACGCAGCAGACCTATCTCCTTGCCTTCGGCAGGGTCAAAGACGATCTTCGCCGAAGCCAG
ACTGAACGCGCCAACCGACTCTCAGCCGCCAAGCAGGCCCGGCTGGACGCCGACGCCGCAGCGGCCGAGGCGCAACGACG
GCAGGACGGTGCAGTCGCGGAACTCGTTGCCGCGCAACGCGCATTCACCAATCAGCAGTCCGACCTCACCCGGTTGGCCG
CCGAACGCGACTCCGCACAAACCCGACTCACTACTGCCCGACCGGTAGCAGCCACCACGCGCCAGCCCACGGCCGCACAA
CCCGGTACCCCGGTGCCGCCGAGCGGCCAATGGGACCGCTCCAGCCCGGCACCGGCGGACAGCTCGGGCACCGGCCAGTG
GGACACCACGCTGCCGATGGTGCCCAGCGCCAATGTGGCCGGCGACCCCATAGCCATCATCAACGCCGTCCTCAAAATCA
TGGCGACCTCGCTGCAACTCACCGCCGACATGGGCCGAAACTTCCTCACCAAACTGGGCATCCTCTCCCCCGCGACCGCT
GCTGCAGATCCCGGCATCACCAATGGACGCATCCCCCGCCTGTACGGCCGCCAGGCCTCGGAGTTCGTGATCCGACGAGC
CATGTCACAACTCGGCGTTCCCTACTCATGGGGCGGTGGCAACGCCAACGGGCCCGCTCGGGGAATCGATCAAGGAGCCA
ACACCGTCGGCTTCGACTGCTCCGGCCTCATGCTCTACGCCTTCGCTGGAGTCGGCATCAAACTCGACCACTACTCCGGA
TCCCAGTACAACGCCGGCCGCAAAGTACCGTCATCGCAGATGCAGCGCGGCGATCTCATCTTCTACGGCCCCAACGCCAG
CCAGCACGAAGCCATGTACCTCGGCGACGGCATGATGCTCGAAGCCCCCTACACCGGGTCAGTGGTCAAAATCTCCCCCG
TACGCAGCTCCGGCATGACGCCCTACGTCACGCGCTTGATCGAATACTGA

Upstream 100 bases:

>100_bases
TACGTACTTACAGCGGTAGTAGGCCGTCAGACATGACACGTCGGCGCACTGCCCCGTCCGACTCGCGGCCACCCGGCAGC
CGCCCCACTCAGGAGAATTG

Downstream 100 bases:

>100_bases
CACCCCGCGCGAGCGCTACGTTGGCCGCGTTGCTGACCAGTCACTCCGCCCCGACTTGGCCGCTGCGAACAGGCTCCTCT
ATTGCCTCACGCCGCTGCCT

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MRRLTSLLIAGVLASMLVLHTSGVATAGHGSEPDGDSETVAGLVAAVAEVNQHVADIGADIQHKQESVNRALVELATARE
AVSEAHRRLADSEKALADSQTAIDATQQRFDEFAASTYMNGPSRSLPLASSPEDILSAASTQQTYLLAFGRVKDDLRRSQ
TERANRLSAAKQARLDADAAAAEAQRRQDGAVAELVAAQRAFTNQQSDLTRLAAERDSAQTRLTTARPVAATTRQPTAAQ
PGTPVPPSGQWDRSSPAPADSSGTGQWDTTLPMVPSANVAGDPIAIINAVLKIMATSLQLTADMGRNFLTKLGILSPATA
AADPGITNGRIPRLYGRQASEFVIRRAMSQLGVPYSWGGGNANGPARGIDQGANTVGFDCSGLMLYAFAGVGIKLDHYSG
SQYNAGRKVPSSQMQRGDLIFYGPNASQHEAMYLGDGMMLEAPYTGSVVKISPVRSSGMTPYVTRLIEY

Sequences:

>Translated_469_residues
MRRLTSLLIAGVLASMLVLHTSGVATAGHGSEPDGDSETVAGLVAAVAEVNQHVADIGADIQHKQESVNRALVELATARE
AVSEAHRRLADSEKALADSQTAIDATQQRFDEFAASTYMNGPSRSLPLASSPEDILSAASTQQTYLLAFGRVKDDLRRSQ
TERANRLSAAKQARLDADAAAAEAQRRQDGAVAELVAAQRAFTNQQSDLTRLAAERDSAQTRLTTARPVAATTRQPTAAQ
PGTPVPPSGQWDRSSPAPADSSGTGQWDTTLPMVPSANVAGDPIAIINAVLKIMATSLQLTADMGRNFLTKLGILSPATA
AADPGITNGRIPRLYGRQASEFVIRRAMSQLGVPYSWGGGNANGPARGIDQGANTVGFDCSGLMLYAFAGVGIKLDHYSG
SQYNAGRKVPSSQMQRGDLIFYGPNASQHEAMYLGDGMMLEAPYTGSVVKISPVRSSGMTPYVTRLIEY
>Mature_469_residues
MRRLTSLLIAGVLASMLVLHTSGVATAGHGSEPDGDSETVAGLVAAVAEVNQHVADIGADIQHKQESVNRALVELATARE
AVSEAHRRLADSEKALADSQTAIDATQQRFDEFAASTYMNGPSRSLPLASSPEDILSAASTQQTYLLAFGRVKDDLRRSQ
TERANRLSAAKQARLDADAAAAEAQRRQDGAVAELVAAQRAFTNQQSDLTRLAAERDSAQTRLTTARPVAATTRQPTAAQ
PGTPVPPSGQWDRSSPAPADSSGTGQWDTTLPMVPSANVAGDPIAIINAVLKIMATSLQLTADMGRNFLTKLGILSPATA
AADPGITNGRIPRLYGRQASEFVIRRAMSQLGVPYSWGGGNANGPARGIDQGANTVGFDCSGLMLYAFAGVGIKLDHYSG
SQYNAGRKVPSSQMQRGDLIFYGPNASQHEAMYLGDGMMLEAPYTGSVVKISPVRSSGMTPYVTRLIEY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786421, Length=119, Percent_Identity=35.2941176470588, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1787944, Length=124, Percent_Identity=29.0322580645161, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 49511; Mature: 49511

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLTSLLIAGVLASMLVLHTSGVATAGHGSEPDGDSETVAGLVAAVAEVNQHVADIGAD
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
IQHKQESVNRALVELATAREAVSEAHRRLADSEKALADSQTAIDATQQRFDEFAASTYMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
GPSRSLPLASSPEDILSAASTQQTYLLAFGRVKDDLRRSQTERANRLSAAKQARLDADAA
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAEAQRRQDGAVAELVAAQRAFTNQQSDLTRLAAERDSAQTRLTTARPVAATTRQPTAAQ
HHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCC
PGTPVPPSGQWDRSSPAPADSSGTGQWDTTLPMVPSANVAGDPIAIINAVLKIMATSLQL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TADMGRNFLTKLGILSPATAAADPGITNGRIPRLYGRQASEFVIRRAMSQLGVPYSWGGG
HHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCEECCCC
NANGPARGIDQGANTVGFDCSGLMLYAFAGVGIKLDHYSGSQYNAGRKVPSSQMQRGDLI
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHCCCCEE
FYGPNASQHEAMYLGDGMMLEAPYTGSVVKISPVRSSGMTPYVTRLIEY
EECCCCCCCCEEEECCCEEEECCCCCCEEEEECCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MRRLTSLLIAGVLASMLVLHTSGVATAGHGSEPDGDSETVAGLVAAVAEVNQHVADIGAD
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
IQHKQESVNRALVELATAREAVSEAHRRLADSEKALADSQTAIDATQQRFDEFAASTYMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
GPSRSLPLASSPEDILSAASTQQTYLLAFGRVKDDLRRSQTERANRLSAAKQARLDADAA
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAEAQRRQDGAVAELVAAQRAFTNQQSDLTRLAAERDSAQTRLTTARPVAATTRQPTAAQ
HHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCC
PGTPVPPSGQWDRSSPAPADSSGTGQWDTTLPMVPSANVAGDPIAIINAVLKIMATSLQL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TADMGRNFLTKLGILSPATAAADPGITNGRIPRLYGRQASEFVIRRAMSQLGVPYSWGGG
HHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCEECCCC
NANGPARGIDQGANTVGFDCSGLMLYAFAGVGIKLDHYSGSQYNAGRKVPSSQMQRGDLI
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHCCCCEE
FYGPNASQHEAMYLGDGMMLEAPYTGSVVKISPVRSSGMTPYVTRLIEY
EECCCCCCCCEEEECCCEEEECCCCCCEEEEECCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]