| Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
|---|---|
| Accession | NC_008703 |
| Length | 302,089 |
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The map label for this gene is 119854972
Identifier: 119854972
GI number: 119854972
Start: 87874
End: 88710
Strand: Reverse
Name: 119854972
Synonym: Mkms_5579
Alternate gene names: NA
Gene position: 88710-87874 (Counterclockwise)
Preceding gene: 119854973
Following gene: 119854967
Centisome position: 29.37
GC content: 67.86
Gene sequence:
>837_bases ATGGCCCGGGGGCAACGCACCAACCTCGCCGATCTCGCCGGCGCCGTCGGGGACAAGTCGCCGGTCGACACCAGCCACCC AAAACCCGACGAGGCAGGCCGCAGCGTGCCACTGACCGACCTCACCGCCAACCCGCGCAACCCCCGCGACGACGTCGGCG ACCTCGCCGACCTCGCCTCGATCACCGACATCCAGCTCCAGCCGGCCCTGGTGGTCAGCAAGGCCGCCTATCTCAAGCTC TATCCAGACGATCCGATCACCACCCGCTACGTCGTCATCAACGGATGCCGTCGCTTGGCCGCGGCCCACAAATACGGGCG CAGTGATCTTGCCATCGTCGTCAACGACGGCGTCGCACGCGATCGCATCACCCTGATCTCCGCGTGCATCGCCGAGAACG TCGACCGCCAAGACTTCGACGTCATCGAGGAAGCCCGAGCAGTCGAAGCGCTCATCGCCGAGTGCGGCCGTGCCGTCGAT GCCGCCAACCGGCTGCACAAAACCGAAGCATGGGTCTCGCAGCGGCGGGCACTGTTGAAGCTGGCACCCGAACTGCAAAC CGCCTTGCGGCGCGGTGAACTGGCCATCCGCGACGCACGACAACTCGCGCGGGTACCGCTGGCCGAACAAGTGGCGCGGT GGCAAGCCACCCTCGACCGCAACAACGACGGCGGGACGGAAAACCGTCAGCGTCCGCCCAGCCGGTCCCGCGTCATCGCC TCCGCGCTCGCCGACTTCGACACCGAGCCCGACCAACTCGCCCACGCGCTGCGTACCTACCTCGGCGCCGACGGCGTCGA CAAGCTGATCGTGCTGCTGCGCGGGCTCGGAAACTAG
Upstream 100 bases:
>100_bases GCCAGGTCGTCACCGAATACCCACTCAACCGAGTGGCCCTACAAGCCCGCGAAGACTTCTACAAATTCGCCCTGGAACTC AACGTCGGGGGAGCGCGCTA
Downstream 100 bases:
>100_bases GGTCTATACATCGGTGAGGTCGCCGAGATGGCCCGGGGTCACGAACTGGCCCAACGCGTCGAGATAGCGCTGCGCCACAG CCCGGTACTTGTCGGCGGCG
Product: putative plasmid partitioning protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MARGQRTNLADLAGAVGDKSPVDTSHPKPDEAGRSVPLTDLTANPRNPRDDVGDLADLASITDIQLQPALVVSKAAYLKL YPDDPITTRYVVINGCRRLAAAHKYGRSDLAIVVNDGVARDRITLISACIAENVDRQDFDVIEEARAVEALIAECGRAVD AANRLHKTEAWVSQRRALLKLAPELQTALRRGELAIRDARQLARVPLAEQVARWQATLDRNNDGGTENRQRPPSRSRVIA SALADFDTEPDQLAHALRTYLGADGVDKLIVLLRGLGN
Sequences:
>Translated_278_residues MARGQRTNLADLAGAVGDKSPVDTSHPKPDEAGRSVPLTDLTANPRNPRDDVGDLADLASITDIQLQPALVVSKAAYLKL YPDDPITTRYVVINGCRRLAAAHKYGRSDLAIVVNDGVARDRITLISACIAENVDRQDFDVIEEARAVEALIAECGRAVD AANRLHKTEAWVSQRRALLKLAPELQTALRRGELAIRDARQLARVPLAEQVARWQATLDRNNDGGTENRQRPPSRSRVIA SALADFDTEPDQLAHALRTYLGADGVDKLIVLLRGLGN >Mature_277_residues ARGQRTNLADLAGAVGDKSPVDTSHPKPDEAGRSVPLTDLTANPRNPRDDVGDLADLASITDIQLQPALVVSKAAYLKLY PDDPITTRYVVINGCRRLAAAHKYGRSDLAIVVNDGVARDRITLISACIAENVDRQDFDVIEEARAVEALIAECGRAVDA ANRLHKTEAWVSQRRALLKLAPELQTALRRGELAIRDARQLARVPLAEQVARWQATLDRNNDGGTENRQRPPSRSRVIAS ALADFDTEPDQLAHALRTYLGADGVDKLIVLLRGLGN
Specific function: Unknown
COG id: COG1475
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30257; Mature: 30125
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGQRTNLADLAGAVGDKSPVDTSHPKPDEAGRSVPLTDLTANPRNPRDDVGDLADLAS CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ITDIQLQPALVVSKAAYLKLYPDDPITTRYVVINGCRRLAAAHKYGRSDLAIVVNDGVAR HHCCCCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH DRITLISACIAENVDRQDFDVIEEARAVEALIAECGRAVDAANRLHKTEAWVSQRRALLK HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPELQTALRRGELAIRDARQLARVPLAEQVARWQATLDRNNDGGTENRQRPPSRSRVIA HHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH SALADFDTEPDQLAHALRTYLGADGVDKLIVLLRGLGN HHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure ARGQRTNLADLAGAVGDKSPVDTSHPKPDEAGRSVPLTDLTANPRNPRDDVGDLADLAS CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ITDIQLQPALVVSKAAYLKLYPDDPITTRYVVINGCRRLAAAHKYGRSDLAIVVNDGVAR HHCCCCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH DRITLISACIAENVDRQDFDVIEEARAVEALIAECGRAVDAANRLHKTEAWVSQRRALLK HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPELQTALRRGELAIRDARQLARVPLAEQVARWQATLDRNNDGGTENRQRPPSRSRVIA HHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH SALADFDTEPDQLAHALRTYLGADGVDKLIVLLRGLGN HHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA