| Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
|---|---|
| Accession | NC_008703 |
| Length | 302,089 |
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The map label for this gene is 119854902
Identifier: 119854902
GI number: 119854902
Start: 14457
End: 15362
Strand: Reverse
Name: 119854902
Synonym: Mkms_5507
Alternate gene names: NA
Gene position: 15362-14457 (Counterclockwise)
Preceding gene: 119854903
Following gene: 119854900
Centisome position: 5.09
GC content: 61.04
Gene sequence:
>906_bases GTGCATGAGGTGTTCGAGGCTTTTCGGCGTGCCCCCAGCAATTACGAACGCGGCTTGAAATTCGAGCAGCTCATGGCGCA GTACCTGCCGCTGGATTCCGTCTACGGCCGACTCTTTAAGCAGGTCTGGTTATGGAAGGACTGGCCTGGGCGGGGCGGCA AGATCGACACCGGAATTGACCTCGTTGCTGAGGAGATCGACACCGGTGACCTATGGGCCATCCAATGCAAGTTCTACGAA CCCGATCACGTGCTGGGAAAACCGGACGTCGACTCGTTCCTGTCCGCGTCAGGAAAGCATCCCTTCGCCCACCGGCTAAT CATCTCCACAACGGATAAGTGGGGGAAAAATGCTGAAGACGCGGTCGACAACCAGCAGATTCCCGTTCAGCGCATTGGAC TGGCTGACATCGCCGAGGCCCCGATCGACTGGGCCTTCGCCGGCCCCGCCGACGGACTGAACCTTGAGCTGGCCCCCGCC CCCAAACGGGACCCCTGGCCTCATCAGCGTGAAGCCATCGACAAAGTGATCGTCGGCTTCACCGAAAACGACCGCGGCAA GCTCATCATGGCGTGTGGCACGGGAAAGACCTTCACCGCGCTCAAGATCTGCGAGCAGATCGCCGACGACCTCGGCGGAA CAGCCAAGATCCTGTTCCTGGTGCCCTCAATATCCCTGCTGTCCCAAACGCTGCGCGAATGGACCGCTCAGTGCCAGGTG GACCTGCGGTCCTTTGCCGTGTGCTCGGACACCAAGGTCTCCCGCGCGGTGGAAGACATTAACCCCTACGACGTGCCACT TCCTGCCACCACCGATCCGGCCACGCTGGTCGCACAAATGGCGCACCGCAAACGCGCGAAAGGACTCTCAATGAAGAAGT CAAGCCGCGGCGGTGACCGGGGGTGA
Upstream 100 bases:
>100_bases CCCTGTTACCCGCCCCGGCCCGACCTCCCTGCGATATTGCGTTCCGCGTTTAGGGTGACTTCGAGCTTCAGCGAAAGGAG TTAGACGGGTGGCGACGTCG
Downstream 100 bases:
>100_bases ATCAGGTTGCCAGGTCCGGTTGTCACGGATGAGGGCGTAGAGAACGTTGGTGCGCCGTCGCGCCAGGCAGATGGTGGCGG GGATCGGCCGCTTTCCTTCG
Product: type III restriction enzyme, res subunit
Products: NA
Alternate protein names: Helicase/Methyltransferase; Type III Restriction Protein Res Subunit; Type III Restriction Res Subunit; Helicase Domain-Containing Protein; Adenine Specific DNA Methyltransferase; Helicase Domain Protein; Superfamily II DNA/RNA Helicase; II DNA/RNA Helicase; Endonuclease And Methylase LlaGI; Restriction- System LlaBIII; Helicase Fragment; Type III Restriction Res Subunit Family; Restriction/; DNA Helicase Restriction Type III R Subunit; DEAD/DEAH Box Helicase-Like
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MHEVFEAFRRAPSNYERGLKFEQLMAQYLPLDSVYGRLFKQVWLWKDWPGRGGKIDTGIDLVAEEIDTGDLWAIQCKFYE PDHVLGKPDVDSFLSASGKHPFAHRLIISTTDKWGKNAEDAVDNQQIPVQRIGLADIAEAPIDWAFAGPADGLNLELAPA PKRDPWPHQREAIDKVIVGFTENDRGKLIMACGTGKTFTALKICEQIADDLGGTAKILFLVPSISLLSQTLREWTAQCQV DLRSFAVCSDTKVSRAVEDINPYDVPLPATTDPATLVAQMAHRKRAKGLSMKKSSRGGDRG
Sequences:
>Translated_301_residues MHEVFEAFRRAPSNYERGLKFEQLMAQYLPLDSVYGRLFKQVWLWKDWPGRGGKIDTGIDLVAEEIDTGDLWAIQCKFYE PDHVLGKPDVDSFLSASGKHPFAHRLIISTTDKWGKNAEDAVDNQQIPVQRIGLADIAEAPIDWAFAGPADGLNLELAPA PKRDPWPHQREAIDKVIVGFTENDRGKLIMACGTGKTFTALKICEQIADDLGGTAKILFLVPSISLLSQTLREWTAQCQV DLRSFAVCSDTKVSRAVEDINPYDVPLPATTDPATLVAQMAHRKRAKGLSMKKSSRGGDRG >Mature_301_residues MHEVFEAFRRAPSNYERGLKFEQLMAQYLPLDSVYGRLFKQVWLWKDWPGRGGKIDTGIDLVAEEIDTGDLWAIQCKFYE PDHVLGKPDVDSFLSASGKHPFAHRLIISTTDKWGKNAEDAVDNQQIPVQRIGLADIAEAPIDWAFAGPADGLNLELAPA PKRDPWPHQREAIDKVIVGFTENDRGKLIMACGTGKTFTALKICEQIADDLGGTAKILFLVPSISLLSQTLREWTAQCQV DLRSFAVCSDTKVSRAVEDINPYDVPLPATTDPATLVAQMAHRKRAKGLSMKKSSRGGDRG
Specific function: Unknown
COG id: COG4889
COG function: function code R; Predicted helicase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33375; Mature: 33375
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEVFEAFRRAPSNYERGLKFEQLMAQYLPLDSVYGRLFKQVWLWKDWPGRGGKIDTGID CHHHHHHHHCCCCHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH LVAEEIDTGDLWAIQCKFYEPDHVLGKPDVDSFLSASGKHPFAHRLIISTTDKWGKNAED HHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCHHCCCCCHH AVDNQQIPVQRIGLADIAEAPIDWAFAGPADGLNLELAPAPKRDPWPHQREAIDKVIVGF HCCCCCCCHHHCCHHHHHCCCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC TENDRGKLIMACGTGKTFTALKICEQIADDLGGTAKILFLVPSISLLSQTLREWTAQCQV CCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH DLRSFAVCSDTKVSRAVEDINPYDVPLPATTDPATLVAQMAHRKRAKGLSMKKSSRGGDR HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC G C >Mature Secondary Structure MHEVFEAFRRAPSNYERGLKFEQLMAQYLPLDSVYGRLFKQVWLWKDWPGRGGKIDTGID CHHHHHHHHCCCCHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH LVAEEIDTGDLWAIQCKFYEPDHVLGKPDVDSFLSASGKHPFAHRLIISTTDKWGKNAED HHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCHHCCCCCHH AVDNQQIPVQRIGLADIAEAPIDWAFAGPADGLNLELAPAPKRDPWPHQREAIDKVIVGF HCCCCCCCHHHCCHHHHHCCCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC TENDRGKLIMACGTGKTFTALKICEQIADDLGGTAKILFLVPSISLLSQTLREWTAQCQV CCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH DLRSFAVCSDTKVSRAVEDINPYDVPLPATTDPATLVAQMAHRKRAKGLSMKKSSRGGDR HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA