| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is pimA [H]
Identifier: 119899873
GI number: 119899873
Start: 3934567
End: 3935748
Strand: Reverse
Name: pimA [H]
Synonym: azo3584
Alternate gene names: 119899873
Gene position: 3935748-3934567 (Counterclockwise)
Preceding gene: 119899874
Following gene: 119899872
Centisome position: 89.94
GC content: 65.48
Gene sequence:
>1182_bases ATGCCGTTTGGTACAAGTCCATTGTCAGGTAGGCGAAGCCGGGCTTGCATGCGGGTCGTACACGTTTACCGGACTTATTT CCCCGATCCCCCGGGCGGCCTTCAGGAGGCTGTCCGGCAGATTTGTATCGCGGTCGGTAACGCGGGGGCCGAGAACCGCA TCTTCACATTGTCGCCGCGCCCCGACCCGGCGCGGCTCGCGCGCCCCGAGGGCGAGGTCGTGCGTGCCCGGTCATGGGCG GCACCCGCTTCCTGCGATCTTGGTGGTCCGTCGGCGCTGGCCGCGTTTCGTGACTGTGTCGCGTGGGCGGACGTCGTCCA TGTGCACTTCCCGTGGCCATACGCGGATGTACTCTGCGCCCTGAGCGGCGGGCGGCGTCCACTGGTGGTCACCTACCACT CCGATATCGTTCGACAGCGCCTGCTGGGGAAACTGTACCGTCCGTTGATGATGAGGACGCTGCGCCGGGCAGCGGCCGTG GTTGCCACGTCTCCCGCCTATGCGCTAACCAGTCCGGTCCTCCAGGTCGCCGGCATTCGGGACAAAGTGGAGGTCATCCC GCTCGGTATCGACGAGAACTCCTATCCCACGAACCGCGACGAAAGCGTGCTGGCGCGGCTGGGGTTGGTGGTGGGGCAAC CCTTCTTCCTGTTCATTGGCGTTCTGCGGTACTACAAGGGATTGCACACACTGTTGTCCGCCGCGGCCGAGGTGGATGCG CCGATCGTGATCGCCGGCTGTGGGCCCCAGGACGAATGGTTGCGTGCGCAGATTGCAACGGAAGGCCTGGCCAACGTGCG GCTTGCCGGACTGGTGTCGGAAACCGAGAAGATGGCTTTGCTGGCGCATTGCAGCGCGCTGGTACTGCCATCGCACCTCC GTTCTGAAGCCTTTGGCATGGTGCTGGTTGAGGCGGCGATGCACGGAAAGCCGATGATTAGCTGCGAACTGGGCACCGGA ACGTCTTTTGTCAACCTGGAGGGTGACACGGGCTTTGTCGTGCCCCCCGAGCAGCCAGCTGCTCTCGCGGCGGCGATGCG CCGCTTGCTGGCAGACCCGGAGCTGCGAGCAGGGATGGGCGCGGCAGCCCGCGTGCGCTACGAGCAGCGATTCTCCGGCG GCGCACTTGGCCGCTCGTATGCCGCGCTGTTCGAGCGCGTTGCCCGTACGGGTGGCACTTGA
Upstream 100 bases:
>100_bases AAGACCAAGACGCAGCGCAGGCGGCATTACCGCGAGGCAATTGCGCTTGTCCGCCGCCACCATGGCCGGGTGCCACTGAA GTGGTGGTTCGCCCAGCCTT
Downstream 100 bases:
>100_bases ACGGACCCACCAACGGCGCGGTGGTGGGTTCCGCGGAGGCGCAGCGCTGTGTTGTGACAGGCGCAAGCGGATTCGTTGGT CAGGCCCTCGTCGCCGCACT
Product: glycosyltransferase
Products: NA
Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MPFGTSPLSGRRSRACMRVVHVYRTYFPDPPGGLQEAVRQICIAVGNAGAENRIFTLSPRPDPARLARPEGEVVRARSWA APASCDLGGPSALAAFRDCVAWADVVHVHFPWPYADVLCALSGGRRPLVVTYHSDIVRQRLLGKLYRPLMMRTLRRAAAV VATSPAYALTSPVLQVAGIRDKVEVIPLGIDENSYPTNRDESVLARLGLVVGQPFFLFIGVLRYYKGLHTLLSAAAEVDA PIVIAGCGPQDEWLRAQIATEGLANVRLAGLVSETEKMALLAHCSALVLPSHLRSEAFGMVLVEAAMHGKPMISCELGTG TSFVNLEGDTGFVVPPEQPAALAAAMRRLLADPELRAGMGAAARVRYEQRFSGGALGRSYAALFERVARTGGT
Sequences:
>Translated_393_residues MPFGTSPLSGRRSRACMRVVHVYRTYFPDPPGGLQEAVRQICIAVGNAGAENRIFTLSPRPDPARLARPEGEVVRARSWA APASCDLGGPSALAAFRDCVAWADVVHVHFPWPYADVLCALSGGRRPLVVTYHSDIVRQRLLGKLYRPLMMRTLRRAAAV VATSPAYALTSPVLQVAGIRDKVEVIPLGIDENSYPTNRDESVLARLGLVVGQPFFLFIGVLRYYKGLHTLLSAAAEVDA PIVIAGCGPQDEWLRAQIATEGLANVRLAGLVSETEKMALLAHCSALVLPSHLRSEAFGMVLVEAAMHGKPMISCELGTG TSFVNLEGDTGFVVPPEQPAALAAAMRRLLADPELRAGMGAAARVRYEQRFSGGALGRSYAALFERVARTGGT >Mature_392_residues PFGTSPLSGRRSRACMRVVHVYRTYFPDPPGGLQEAVRQICIAVGNAGAENRIFTLSPRPDPARLARPEGEVVRARSWAA PASCDLGGPSALAAFRDCVAWADVVHVHFPWPYADVLCALSGGRRPLVVTYHSDIVRQRLLGKLYRPLMMRTLRRAAAVV ATSPAYALTSPVLQVAGIRDKVEVIPLGIDENSYPTNRDESVLARLGLVVGQPFFLFIGVLRYYKGLHTLLSAAAEVDAP IVIAGCGPQDEWLRAQIATEGLANVRLAGLVSETEKMALLAHCSALVLPSHLRSEAFGMVLVEAAMHGKPMISCELGTGT SFVNLEGDTGFVVPPEQPAALAAAMRRLLADPELRAGMGAAARVRYEQRFSGGALGRSYAALFERVARTGGT
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.57 [H]
Molecular weight: Translated: 42207; Mature: 42076
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFGTSPLSGRRSRACMRVVHVYRTYFPDPPGGLQEAVRQICIAVGNAGAENRIFTLSPR CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCC PDPARLARPEGEVVRARSWAAPASCDLGGPSALAAFRDCVAWADVVHVHFPWPYADVLCA CCHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHH LSGGRRPLVVTYHSDIVRQRLLGKLYRPLMMRTLRRAAAVVATSPAYALTSPVLQVAGIR HCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC DKVEVIPLGIDENSYPTNRDESVLARLGLVVGQPFFLFIGVLRYYKGLHTLLSAAAEVDA CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PIVIAGCGPQDEWLRAQIATEGLANVRLAGLVSETEKMALLAHCSALVLPSHLRSEAFGM CEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVEAAMHGKPMISCELGTGTSFVNLEGDTGFVVPPEQPAALAAAMRRLLADPELRAGMG HHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHCCCCHHHCCC AAARVRYEQRFSGGALGRSYAALFERVARTGGT HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure PFGTSPLSGRRSRACMRVVHVYRTYFPDPPGGLQEAVRQICIAVGNAGAENRIFTLSPR CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCC PDPARLARPEGEVVRARSWAAPASCDLGGPSALAAFRDCVAWADVVHVHFPWPYADVLCA CCHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHH LSGGRRPLVVTYHSDIVRQRLLGKLYRPLMMRTLRRAAAVVATSPAYALTSPVLQVAGIR HCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC DKVEVIPLGIDENSYPTNRDESVLARLGLVVGQPFFLFIGVLRYYKGLHTLLSAAAEVDA CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PIVIAGCGPQDEWLRAQIATEGLANVRLAGLVSETEKMALLAHCSALVLPSHLRSEAFGM CEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVEAAMHGKPMISCELGTGTSFVNLEGDTGFVVPPEQPAALAAAMRRLLADPELRAGMG HHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHCCCCHHHCCC AAARVRYEQRFSGGALGRSYAALFERVARTGGT HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12068013 [H]