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The map label for this gene is lpsE [H]

Identifier: 119899867

GI number: 119899867

Start: 3925072

End: 3926202

Strand: Reverse

Name: lpsE [H]

Synonym: azo3578

Alternate gene names: 119899867

Gene position: 3926202-3925072 (Counterclockwise)

Preceding gene: 119899868

Following gene: 119899866

Centisome position: 89.72

GC content: 71.0

Gene sequence:

>1131_bases
TTGGCTGAGCCCCGCATCCTGCAGTTCTGCCACTGCCACTACGGCCCCTTCGCCGATGTGGCGCGGCAGTACGCGGTGCT
GTTCCGCGACACGCCCTACAAGGTCACCACGGTCTACCTGACCGACCCGCCCAGCGACGAGGTGACCGTGCTGTCTGCCT
CCGACGAGGTGATCTACCTCGACTACGACGGCAAGGACGTGCGCGGCCTCAAGCTCGACGCGATGCGCCGGCTGCGCGAG
ATCGTCGCCGCGCGCGACGTGCGCATGATCCTGGCGCACCGCTTCAAGCCGATCTTCATCTCGTGCTGGGCGACGAATTT
GCCGGTGATCGGCGTGCATCACGCCTTCGGCGACTACGAGCGGCTGTCGCACCAGCTGTTCGCGCGCTGGTTCGGCAAGC
GTCTCGGCCTGCTCGGCGTGTCGGACGCGATCCGCGACGACATCCGCCGCGGCGTGCCGTCGTGGCCGGCCGACCGCATC
GAAACCCTGCACAACCGTATTGACGTCGACGCGGTGCGCGCTGACGTGCTGCCGCGCGCTGCCGCGCGTGAGCGCCTCGG
CCTGCCGCAGGATGCCTACGTGATCGGCAACGTCGGCCGCCTGCATCCGGACAAGGACCAGGCCACGCTGCTGCGTGCCT
TCGCCCGCGCGCGCACTGCGCTGCCGGCCGGCGCGCTGGTGGCCATCCTCGGCAAGGGACGGCTGGAAGCCAAGCTGAAG
GCGCAGGCCGCCGAACTCGGTATTGCCGACGCGGTGCGCTTCCTCGGCCAGGTGCCCAACGCCAGGACGGCGTTCTCCGC
CTTCGACCTCTTCGCGCTCAGCTCGGACCACGAGCCCTTCGGCATGGTGCTGCTGGAGGCGATGGCCGCCGGCGTGCCGG
TGGTCGCCACCGACTGCGGCGGCGCGCCGGAGGTGGTGGGCGATGCCGGGGCGCTGTTCCCGCTCGGCGACGATGCTGCG
CTCGCGCGGCTGATCGTGGCGCATGCCGGCTGGTCCGACGAGCAGCGCACTGCGGGTGCCGAGGCGGCGCTGGCGCGGCT
GCGCGCGTATTTCTCCGACGAGGCGGCGCGCCAGCGCTTCTTCGCCCTGCCCATGGTGCAGGACGCGCTCGGGCGGGAGA
GCATCCGATGA

Upstream 100 bases:

>100_bases
AACATGTTCTACGGCTCGGACCTCGAGTACCTGATCATGGAAGACATCCTGGTGGTCAAGCCGGGCGTGCAGCTGGAGGC
CGGCGCCGCGGAGGCCAGCC

Downstream 100 bases:

>100_bases
GCGTCGCAGGCCGTACGCCCAGCCTGTGCTTCGTCATCCCGTATTTCGGCCAGTGGCCGTTCTGGATGCCGTTCTTCCTC
GCCAGCTGCCGCGCCAACCC

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MAEPRILQFCHCHYGPFADVARQYAVLFRDTPYKVTTVYLTDPPSDEVTVLSASDEVIYLDYDGKDVRGLKLDAMRRLRE
IVAARDVRMILAHRFKPIFISCWATNLPVIGVHHAFGDYERLSHQLFARWFGKRLGLLGVSDAIRDDIRRGVPSWPADRI
ETLHNRIDVDAVRADVLPRAAARERLGLPQDAYVIGNVGRLHPDKDQATLLRAFARARTALPAGALVAILGKGRLEAKLK
AQAAELGIADAVRFLGQVPNARTAFSAFDLFALSSDHEPFGMVLLEAMAAGVPVVATDCGGAPEVVGDAGALFPLGDDAA
LARLIVAHAGWSDEQRTAGAEAALARLRAYFSDEAARQRFFALPMVQDALGRESIR

Sequences:

>Translated_376_residues
MAEPRILQFCHCHYGPFADVARQYAVLFRDTPYKVTTVYLTDPPSDEVTVLSASDEVIYLDYDGKDVRGLKLDAMRRLRE
IVAARDVRMILAHRFKPIFISCWATNLPVIGVHHAFGDYERLSHQLFARWFGKRLGLLGVSDAIRDDIRRGVPSWPADRI
ETLHNRIDVDAVRADVLPRAAARERLGLPQDAYVIGNVGRLHPDKDQATLLRAFARARTALPAGALVAILGKGRLEAKLK
AQAAELGIADAVRFLGQVPNARTAFSAFDLFALSSDHEPFGMVLLEAMAAGVPVVATDCGGAPEVVGDAGALFPLGDDAA
LARLIVAHAGWSDEQRTAGAEAALARLRAYFSDEAARQRFFALPMVQDALGRESIR
>Mature_375_residues
AEPRILQFCHCHYGPFADVARQYAVLFRDTPYKVTTVYLTDPPSDEVTVLSASDEVIYLDYDGKDVRGLKLDAMRRLREI
VAARDVRMILAHRFKPIFISCWATNLPVIGVHHAFGDYERLSHQLFARWFGKRLGLLGVSDAIRDDIRRGVPSWPADRIE
TLHNRIDVDAVRADVLPRAAARERLGLPQDAYVIGNVGRLHPDKDQATLLRAFARARTALPAGALVAILGKGRLEAKLKA
QAAELGIADAVRFLGQVPNARTAFSAFDLFALSSDHEPFGMVLLEAMAAGVPVVATDCGGAPEVVGDAGALFPLGDDAAL
ARLIVAHAGWSDEQRTAGAEAALARLRAYFSDEAARQRFFALPMVQDALGRESIR

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41176; Mature: 41044

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPRILQFCHCHYGPFADVARQYAVLFRDTPYKVTTVYLTDPPSDEVTVLSASDEVIYL
CCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCCEEEE
DYDGKDVRGLKLDAMRRLREIVAARDVRMILAHRFKPIFISCWATNLPVIGVHHAFGDYE
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHCCHH
RLSHQLFARWFGKRLGLLGVSDAIRDDIRRGVPSWPADRIETLHNRIDVDAVRADVLPRA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
AARERLGLPQDAYVIGNVGRLHPDKDQATLLRAFARARTALPAGALVAILGKGRLEAKLK
HHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHH
AQAAELGIADAVRFLGQVPNARTAFSAFDLFALSSDHEPFGMVLLEAMAAGVPVVATDCG
HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCEEEECCC
GAPEVVGDAGALFPLGDDAALARLIVAHAGWSDEQRTAGAEAALARLRAYFSDEAARQRF
CCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALPMVQDALGRESIR
HHCHHHHHHHCCCCCC
>Mature Secondary Structure 
AEPRILQFCHCHYGPFADVARQYAVLFRDTPYKVTTVYLTDPPSDEVTVLSASDEVIYL
CCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCCEEEE
DYDGKDVRGLKLDAMRRLREIVAARDVRMILAHRFKPIFISCWATNLPVIGVHHAFGDYE
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHCCHH
RLSHQLFARWFGKRLGLLGVSDAIRDDIRRGVPSWPADRIETLHNRIDVDAVRADVLPRA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
AARERLGLPQDAYVIGNVGRLHPDKDQATLLRAFARARTALPAGALVAILGKGRLEAKLK
HHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHH
AQAAELGIADAVRFLGQVPNARTAFSAFDLFALSSDHEPFGMVLLEAMAAGVPVVATDCG
HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCEEEECCC
GAPEVVGDAGALFPLGDDAALARLIVAHAGWSDEQRTAGAEAALARLRAYFSDEAARQRF
CCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALPMVQDALGRESIR
HHCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]