| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is waaE2 [H]
Identifier: 119899852
GI number: 119899852
Start: 3909437
End: 3910396
Strand: Direct
Name: waaE2 [H]
Synonym: azo3563
Alternate gene names: 119899852
Gene position: 3909437-3910396 (Clockwise)
Preceding gene: 119899851
Following gene: 119899853
Centisome position: 89.34
GC content: 73.02
Gene sequence:
>960_bases ATGTCCCAACCGCTGCCTTCCTCCCTGCCCGACTTCACCCGCGGCCGCGTTCTCGTCGTCGGCGACGTGATGCTCGACCG CTACTGGCATGGCTCCACCACGCGCATCTCGCCCGAGGCCCCGGTGCCGGTGGTGAAGGTGGAAGGCGACGAATTCCGCG CCGGCGGCGCCGGCAACGTCGCGCTCAACGCCGCCTCGCTGGGCGCCGGCGCCGAGCTGGTCGGGCTGGTCGGGCGTGAC GAAGCCGCCCGCCTGCTGCGCGAACGGCTGCAAGCCGGCGGCGTGGTGTGTCGCCTGGAAGAAGCGCCGCAACACCCCAC GATCACCAAGCTGCGCATCATCAGCCGCCACCAGCAGCTGATCCGGCTCGACTTCGAGGACAACTTCGCGGTGCTGGAAT CGGCCGGCATCGAAGCCGCGTTCGAAGCGGCGCTGCCGGGCAGCGGCGCGGTCGTGCTCTCCGACTACGGCAAGGGCACG CTGGCCGGCGTCGGCACGCTGGTCCGGGTCGCACGCGAACGCGGGCTGCCGGTGGTGGTCGACCCCAAGGGCACCGATTT CGCGCGCTACCGCGGCGCCACCGTGATCACCCCCAATCTCGCCGAGTTCGAGGCGGTGGTGGGCCACTGCGCAGACGAAG CCACGCTGGTCTCGCGCGGCGAGGCGCTGCGCGACACGCTGGACCTCGACGCGCTGCTGGTCACCCGCTCCGAGCGCGGC ATGACGCTGCTCGAACGCGGCCACGCCCCGCTCAACCTGCCGACGCGCGCGCGCGACGTGTTCGACGTGACCGGCGCGGG CGACACCGTGGTCGCAGTGCTCGGCGCCGGCCTCGCCTGCGGGCTGACGCTGGCCGAAGCCACCGCGCTCGCCAACCTCG CGGCCGGCGTCGTGGTCGGCAAGCTGGGCACCGCCACGGTCAGCGCCGTCGAACTCGCCGATGCCCTGCGCGCCGCCTGA
Upstream 100 bases:
>100_bases CGCCGGCACCGCAGGCCCCGGGCGACCGCGTTCGCCGCGCCGCCGGAGCGGCCTTCGTGGGATAATTGCGGACTTTTCAA CACGCTAGCGCGCCTTGCCG
Downstream 100 bases:
>100_bases GGCGCCCGCGGCCCCCAGACGTACTGAAAGAGGAAAACCGAGATGATCATCGTTACCGGCGGCGCCGGCTTCATCGGCAG CAACATCGTGCAGGGCCTCA
Product: ADP-heptose synthase
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSQPLPSSLPDFTRGRVLVVGDVMLDRYWHGSTTRISPEAPVPVVKVEGDEFRAGGAGNVALNAASLGAGAELVGLVGRD EAARLLRERLQAGGVVCRLEEAPQHPTITKLRIISRHQQLIRLDFEDNFAVLESAGIEAAFEAALPGSGAVVLSDYGKGT LAGVGTLVRVARERGLPVVVDPKGTDFARYRGATVITPNLAEFEAVVGHCADEATLVSRGEALRDTLDLDALLVTRSERG MTLLERGHAPLNLPTRARDVFDVTGAGDTVVAVLGAGLACGLTLAEATALANLAAGVVVGKLGTATVSAVELADALRAA
Sequences:
>Translated_319_residues MSQPLPSSLPDFTRGRVLVVGDVMLDRYWHGSTTRISPEAPVPVVKVEGDEFRAGGAGNVALNAASLGAGAELVGLVGRD EAARLLRERLQAGGVVCRLEEAPQHPTITKLRIISRHQQLIRLDFEDNFAVLESAGIEAAFEAALPGSGAVVLSDYGKGT LAGVGTLVRVARERGLPVVVDPKGTDFARYRGATVITPNLAEFEAVVGHCADEATLVSRGEALRDTLDLDALLVTRSERG MTLLERGHAPLNLPTRARDVFDVTGAGDTVVAVLGAGLACGLTLAEATALANLAAGVVVGKLGTATVSAVELADALRAA >Mature_318_residues SQPLPSSLPDFTRGRVLVVGDVMLDRYWHGSTTRISPEAPVPVVKVEGDEFRAGGAGNVALNAASLGAGAELVGLVGRDE AARLLRERLQAGGVVCRLEEAPQHPTITKLRIISRHQQLIRLDFEDNFAVLESAGIEAAFEAALPGSGAVVLSDYGKGTL AGVGTLVRVARERGLPVVVDPKGTDFARYRGATVITPNLAEFEAVVGHCADEATLVSRGEALRDTLDLDALLVTRSERGM TLLERGHAPLNLPTRARDVFDVTGAGDTVVAVLGAGLACGLTLAEATALANLAAGVVVGKLGTATVSAVELADALRAA
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789432, Length=310, Percent_Identity=60.6451612903226, Blast_Score=369, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]
EC number: 2.7.-.-
Molecular weight: Translated: 33122; Mature: 32991
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPLPSSLPDFTRGRVLVVGDVMLDRYWHGSTTRISPEAPVPVVKVEGDEFRAGGAGNV CCCCCCCCCCCCCCCCEEEEEHHHHHHEECCCCCEECCCCCCCEEEECCCEECCCCCCCE ALNAASLGAGAELVGLVGRDEAARLLRERLQAGGVVCRLEEAPQHPTITKLRIISRHQQL EEEECCCCCCCCEEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHCCEE IRLDFEDNFAVLESAGIEAAFEAALPGSGAVVLSDYGKGTLAGVGTLVRVARERGLPVVV EEEECCCCEEEEECCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEE DPKGTDFARYRGATVITPNLAEFEAVVGHCADEATLVSRGEALRDTLDLDALLVTRSERG CCCCCCHHHHCCCEEECCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHCCEEEEEECCCCC MTLLERGHAPLNLPTRARDVFDVTGAGDTVVAVLGAGLACGLTLAEATALANLAAGVVVG CCHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEE KLGTATVSAVELADALRAA CCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SQPLPSSLPDFTRGRVLVVGDVMLDRYWHGSTTRISPEAPVPVVKVEGDEFRAGGAGNV CCCCCCCCCCCCCCCEEEEEHHHHHHEECCCCCEECCCCCCCEEEECCCEECCCCCCCE ALNAASLGAGAELVGLVGRDEAARLLRERLQAGGVVCRLEEAPQHPTITKLRIISRHQQL EEEECCCCCCCCEEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHCCEE IRLDFEDNFAVLESAGIEAAFEAALPGSGAVVLSDYGKGTLAGVGTLVRVARERGLPVVV EEEECCCCEEEEECCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEE DPKGTDFARYRGATVITPNLAEFEAVVGHCADEATLVSRGEALRDTLDLDALLVTRSERG CCCCCCHHHHCCCEEECCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHCCEEEEEECCCCC MTLLERGHAPLNLPTRARDVFDVTGAGDTVVAVLGAGLACGLTLAEATALANLAAGVVVG CCHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEE KLGTATVSAVELADALRAA CCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA