| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is dld [H]
Identifier: 119899721
GI number: 119899721
Start: 3761183
End: 3762592
Strand: Direct
Name: dld [H]
Synonym: azo3432
Alternate gene names: 119899721
Gene position: 3761183-3762592 (Clockwise)
Preceding gene: 119899677
Following gene: 119899722
Centisome position: 85.95
GC content: 67.38
Gene sequence:
>1410_bases ATGACACAGCAGGCCCCCGCGAACGCCGCGCTCCCCGAGGCGCTGGACACCGTACTCCAGACGAAATTCGGCAGCCGCTA CACCACCTCGGGCGGTGTTCGCGCCCACCATGGGCACGACGAGTCGCATTTCCCCGACGCGCCGCCCCAGGCGGTGCTGT TTCCCCACACCACCGAGGAGGTTGCGGAGGTGGTAATGCGGTGCGCGCAGTACGGCGTTCCGCTGATCCCCTACGGCGCC GGGACGTCGCTGGAGGGACACGTCCTCGCGATCCGCGGCGGGATCTGCCTCGACTTCAGCGAAATGAACAAGGTGCTGGC GATTCGCGCCGAGGACATGGACGTGGTCGTACAGCCGGGTGTCACCCGCAAGCAGCTCAATGCCGCGCTTCACGGCAGCG GCCTGTTCTTCCCGATCGACCCCGGCGCCGATGCCAGCCTTGGCGGCATGGCCGCGACGCGGGCGTCGGGAACCAACGCG GTCCGCTACGGCACGATGCGCGATAACGTGCTGGGCCTCACGGCGGTGATGGCGGACGGCAGCATCGTTCGCACCGGAAG TCGGGCCCGCAAGTCTTCCGCCGGTTACGACCTCACACGTCTTCTGATCGGCTCGGAAGGCACGCTCGGCATCATCACCG AACTGACGGTACGCCTTCACCCGCTACCGGAAGCGGTTTCCAGCGCGGTGTGCGCCTTCCCCGACGTGGATAGCGCCGTT CGTACCGTCATCGCCACCATCCAGCTCGGTGTTCCGGTCGCGCGGATCGAACTGCTCGACGCGCTGACGGTGAGCGCGGT CAATCGCTACAGCAAGACCACCCTGCGCGAAGCGCCGATGCTGTTCTTCGAGTTTCACGGCTCGCCTGCCGGGGTGGAGG AGCAAGCCGGGATCGTGCAGACGCTGGCGCACGACCACGGCGGACTCGACTTCGAGTGGGCAAGCCGCCCCGAGGAGCGC AGCCGACTGTGGGCGGCCCGCCACGACGTCTATTTCGCCAGCCTCAATCTTCGCCCCGGCAGCCGCGGCATCACTTCGGA CGTGTGCGTGCCGATCTCGCGGCTGGCTGAGTGCGTCGCCGGCACGCGCGACGACATCGCGGCCTCCGGCTTCATCGCGC CCATCGTCGGACATGTGGGTGACGGCAACTTCCACACCATCATCCTCGTCGATCCGGACGACCCGGCCGAGATCGAACGT GCGGAAGCGCTCAACCACCGCATCGTCGAGCGTGCGCTGGCGCTGGGCGGCACCTGCACCGGAGAGCACGGCGTGGGGAT GGGCAAGCAGCACTTCCTTGCCGCGGAGCACGGCGAAAACGCGGTTCGCGCGATGAGACTGATCAAGCAGGCGCTCGACC CGCACAATTTGCTGAATCCAGGCAAGGTGGTGCCGTGGCCTGCGGATTGA
Upstream 100 bases:
>100_bases TTTCCCGCGAACAGCGCCCGCTTGGGCGCTGGCCCGCGCGCGGGCGGTCGCCCACAATGCACCACCATCCCAGATAACAA CGATATCCAGGAGACGACAG
Downstream 100 bases:
>100_bases ACGAACCCGCGCCGGCTTAGGGTATCCAAGGATTGAGCCGTCGCCCGCAGGCGACCACGATGTTGCCGGCTTCGCCGTAT TCGCCGCGGAGCCGTCGCGC
Product: D-lactate dehydrogenase
Products: pyruvate; ferrocytochrome c
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MTQQAPANAALPEALDTVLQTKFGSRYTTSGGVRAHHGHDESHFPDAPPQAVLFPHTTEEVAEVVMRCAQYGVPLIPYGA GTSLEGHVLAIRGGICLDFSEMNKVLAIRAEDMDVVVQPGVTRKQLNAALHGSGLFFPIDPGADASLGGMAATRASGTNA VRYGTMRDNVLGLTAVMADGSIVRTGSRARKSSAGYDLTRLLIGSEGTLGIITELTVRLHPLPEAVSSAVCAFPDVDSAV RTVIATIQLGVPVARIELLDALTVSAVNRYSKTTLREAPMLFFEFHGSPAGVEEQAGIVQTLAHDHGGLDFEWASRPEER SRLWAARHDVYFASLNLRPGSRGITSDVCVPISRLAECVAGTRDDIAASGFIAPIVGHVGDGNFHTIILVDPDDPAEIER AEALNHRIVERALALGGTCTGEHGVGMGKQHFLAAEHGENAVRAMRLIKQALDPHNLLNPGKVVPWPAD
Sequences:
>Translated_469_residues MTQQAPANAALPEALDTVLQTKFGSRYTTSGGVRAHHGHDESHFPDAPPQAVLFPHTTEEVAEVVMRCAQYGVPLIPYGA GTSLEGHVLAIRGGICLDFSEMNKVLAIRAEDMDVVVQPGVTRKQLNAALHGSGLFFPIDPGADASLGGMAATRASGTNA VRYGTMRDNVLGLTAVMADGSIVRTGSRARKSSAGYDLTRLLIGSEGTLGIITELTVRLHPLPEAVSSAVCAFPDVDSAV RTVIATIQLGVPVARIELLDALTVSAVNRYSKTTLREAPMLFFEFHGSPAGVEEQAGIVQTLAHDHGGLDFEWASRPEER SRLWAARHDVYFASLNLRPGSRGITSDVCVPISRLAECVAGTRDDIAASGFIAPIVGHVGDGNFHTIILVDPDDPAEIER AEALNHRIVERALALGGTCTGEHGVGMGKQHFLAAEHGENAVRAMRLIKQALDPHNLLNPGKVVPWPAD >Mature_468_residues TQQAPANAALPEALDTVLQTKFGSRYTTSGGVRAHHGHDESHFPDAPPQAVLFPHTTEEVAEVVMRCAQYGVPLIPYGAG TSLEGHVLAIRGGICLDFSEMNKVLAIRAEDMDVVVQPGVTRKQLNAALHGSGLFFPIDPGADASLGGMAATRASGTNAV RYGTMRDNVLGLTAVMADGSIVRTGSRARKSSAGYDLTRLLIGSEGTLGIITELTVRLHPLPEAVSSAVCAFPDVDSAVR TVIATIQLGVPVARIELLDALTVSAVNRYSKTTLREAPMLFFEFHGSPAGVEEQAGIVQTLAHDHGGLDFEWASRPEERS RLWAARHDVYFASLNLRPGSRGITSDVCVPISRLAECVAGTRDDIAASGFIAPIVGHVGDGNFHTIILVDPDDPAEIERA EALNHRIVERALALGGTCTGEHGVGMGKQHFLAAEHGENAVRAMRLIKQALDPHNLLNPGKVVPWPAD
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Homo sapiens, GI37595756, Length=455, Percent_Identity=54.5054945054945, Blast_Score=501, Evalue=1e-142, Organism=Homo sapiens, GI37595754, Length=478, Percent_Identity=51.8828451882845, Blast_Score=491, Evalue=1e-139, Organism=Homo sapiens, GI119964728, Length=425, Percent_Identity=30.8235294117647, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI4501993, Length=455, Percent_Identity=24.3956043956044, Blast_Score=117, Evalue=3e-26, Organism=Escherichia coli, GI1789351, Length=421, Percent_Identity=30.8788598574822, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI1787977, Length=527, Percent_Identity=28.2732447817837, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI48994907, Length=446, Percent_Identity=25.5605381165919, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI48994914, Length=138, Percent_Identity=32.6086956521739, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71992373, Length=460, Percent_Identity=48.2608695652174, Blast_Score=461, Evalue=1e-130, Organism=Caenorhabditis elegans, GI71992381, Length=460, Percent_Identity=47.1739130434783, Blast_Score=442, Evalue=1e-124, Organism=Caenorhabditis elegans, GI71992392, Length=381, Percent_Identity=50.9186351706037, Blast_Score=409, Evalue=1e-114, Organism=Caenorhabditis elegans, GI17534361, Length=432, Percent_Identity=26.1574074074074, Blast_Score=137, Evalue=9e-33, Organism=Caenorhabditis elegans, GI17556096, Length=462, Percent_Identity=22.7272727272727, Blast_Score=110, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6320027, Length=444, Percent_Identity=41.2162162162162, Blast_Score=323, Evalue=4e-89, Organism=Saccharomyces cerevisiae, GI6320023, Length=441, Percent_Identity=27.891156462585, Blast_Score=149, Evalue=9e-37, Organism=Saccharomyces cerevisiae, GI6320764, Length=441, Percent_Identity=26.530612244898, Blast_Score=148, Evalue=2e-36, Organism=Drosophila melanogaster, GI18921117, Length=426, Percent_Identity=28.4037558685446, Blast_Score=158, Evalue=6e-39, Organism=Drosophila melanogaster, GI24639277, Length=426, Percent_Identity=28.4037558685446, Blast_Score=158, Evalue=6e-39, Organism=Drosophila melanogaster, GI24639275, Length=426, Percent_Identity=28.4037558685446, Blast_Score=158, Evalue=6e-39, Organism=Drosophila melanogaster, GI24653753, Length=464, Percent_Identity=25.4310344827586, Blast_Score=130, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR016164 - InterPro: IPR016168 - InterPro: IPR004113 - InterPro: IPR004490 - InterPro: IPR006094 - InterPro: IPR016171 [H]
Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]
EC number: 1.1.2.4
Molecular weight: Translated: 49814; Mature: 49683
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQAPANAALPEALDTVLQTKFGSRYTTSGGVRAHHGHDESHFPDAPPQAVLFPHTTEE CCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCEEEECCCCCCCCCCCCCCEEECCCCHHH VAEVVMRCAQYGVPLIPYGAGTSLEGHVLAIRGGICLDFSEMNKVLAIRAEDMDVVVQPG HHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCEEEEHHHCCCEEEEEECCCEEEECCC VTRKQLNAALHGSGLFFPIDPGADASLGGMAATRASGTNAVRYGTMRDNVLGLTAVMADG CCHHHHHHHCCCCEEEEECCCCCCCCCCCCEEECCCCCCEEEECCCCCCHHEEEEEECCC SIVRTGSRARKSSAGYDLTRLLIGSEGTLGIITELTVRLHPLPEAVSSAVCAFPDVDSAV CEEECCCHHHHCCCCCCEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHEECCCCCHHHH RTVIATIQLGVPVARIELLDALTVSAVNRYSKTTLREAPMLFFEFHGSPAGVEEQAGIVQ HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHH TLAHDHGGLDFEWASRPEERSRLWAARHDVYFASLNLRPGSRGITSDVCVPISRLAECVA HHHHCCCCCCCHHCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHC GTRDDIAASGFIAPIVGHVGDGNFHTIILVDPDDPAEIERAEALNHRIVERALALGGTCT CCCCHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GEHGVGMGKQHFLAAEHGENAVRAMRLIKQALDPHNLLNPGKVVPWPAD CCCCCCCCHHHEEEHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQQAPANAALPEALDTVLQTKFGSRYTTSGGVRAHHGHDESHFPDAPPQAVLFPHTTEE CCCCCCCCCCHHHHHHHHHHHCCCCEECCCCEEEECCCCCCCCCCCCCCEEECCCCHHH VAEVVMRCAQYGVPLIPYGAGTSLEGHVLAIRGGICLDFSEMNKVLAIRAEDMDVVVQPG HHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCEEEEHHHCCCEEEEEECCCEEEECCC VTRKQLNAALHGSGLFFPIDPGADASLGGMAATRASGTNAVRYGTMRDNVLGLTAVMADG CCHHHHHHHCCCCEEEEECCCCCCCCCCCCEEECCCCCCEEEECCCCCCHHEEEEEECCC SIVRTGSRARKSSAGYDLTRLLIGSEGTLGIITELTVRLHPLPEAVSSAVCAFPDVDSAV CEEECCCHHHHCCCCCCEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHEECCCCCHHHH RTVIATIQLGVPVARIELLDALTVSAVNRYSKTTLREAPMLFFEFHGSPAGVEEQAGIVQ HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHH TLAHDHGGLDFEWASRPEERSRLWAARHDVYFASLNLRPGSRGITSDVCVPISRLAECVA HHHHCCCCCCCHHCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHC GTRDDIAASGFIAPIVGHVGDGNFHTIILVDPDDPAEIERAEALNHRIVERALALGGTCT CCCCHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GEHGVGMGKQHFLAAEHGENAVRAMRLIKQALDPHNLLNPGKVVPWPAD CCCCCCCCHHHEEEHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (R)-lactate; ferricytochrome c
Specific reaction: (R)-lactate + 2 ferricytochrome c = pyruvate + 2 ferrocytochrome c
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969504; 9384377 [H]