Click here to switch to the map view.

The map label for this gene is secE [H]

Identifier: 119899719

GI number: 119899719

Start: 3758912

End: 3759259

Strand: Reverse

Name: secE [H]

Synonym: azo3430

Alternate gene names: 119899719

Gene position: 3759259-3758912 (Counterclockwise)

Preceding gene: 119899720

Following gene: 119899718

Centisome position: 85.91

GC content: 60.06

Gene sequence:

>348_bases
ATGGCCGATAAGTTGAAGGTTGCGCTGGCGATCTTTTTGGTTGCAGCCGGCGTGGTCGGCTTTTACCTGCTGTCCGATCA
GGCGCTGGTTCTGCGTGTGCTTTCCGTGCTCGCCGGTCTTGCTGCAGGCGTCACGGTTGCCTGGTTTTCCGAGCCGGGCC
GCCGCTTCGCCGAGTTCGCACGCGAGGCCGTGGTCGAGACGAAAAAGGTTGTCTGGCCGAGCCGCAAGGAAACGGTGCAG
ACCACCGGTATGGTGTTCGCCTTCGTTGTCGTGATGGCGATCTTTCTCTGGCTGACGGACAAGAGCCTGGAGTGGGTGTT
GTACGACCTGATTCTGGGCTGGAAATGA

Upstream 100 bases:

>100_bases
AGGGGCATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGATTCCCTCTGCCCCTGCCATACT
TTCCGGAAGTCACGACCCAG

Downstream 100 bases:

>100_bases
TCATGACGAAGCGCTGGTATGTCGTGCATGCGTATTCGGGCTTCGAGAAGTCCGTGCAGCGTGCGCTGGTCGACCGCATC
AATCGCGCCGGCATGCAGGA

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MADKLKVALAIFLVAAGVVGFYLLSDQALVLRVLSVLAGLAAGVTVAWFSEPGRRFAEFAREAVVETKKVVWPSRKETVQ
TTGMVFAFVVVMAIFLWLTDKSLEWVLYDLILGWK

Sequences:

>Translated_115_residues
MADKLKVALAIFLVAAGVVGFYLLSDQALVLRVLSVLAGLAAGVTVAWFSEPGRRFAEFAREAVVETKKVVWPSRKETVQ
TTGMVFAFVVVMAIFLWLTDKSLEWVLYDLILGWK
>Mature_114_residues
ADKLKVALAIFLVAAGVVGFYLLSDQALVLRVLSVLAGLAAGVTVAWFSEPGRRFAEFAREAVVETKKVVWPSRKETVQT
TGMVFAFVVVMAIFLWLTDKSLEWVLYDLILGWK

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=81, Percent_Identity=44.4444444444444, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 12751; Mature: 12620

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKLKVALAIFLVAAGVVGFYLLSDQALVLRVLSVLAGLAAGVTVAWFSEPGRRFAEFA
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
REAVVETKKVVWPSRKETVQTTGMVFAFVVVMAIFLWLTDKSLEWVLYDLILGWK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
ADKLKVALAIFLVAAGVVGFYLLSDQALVLRVLSVLAGLAAGVTVAWFSEPGRRFAEFA
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
REAVVETKKVVWPSRKETVQTTGMVFAFVVVMAIFLWLTDKSLEWVLYDLILGWK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]