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The map label for this gene is ssb [H]

Identifier: 119899674

GI number: 119899674

Start: 3722791

End: 3723273

Strand: Reverse

Name: ssb [H]

Synonym: azo3385

Alternate gene names: 119899674

Gene position: 3723273-3722791 (Counterclockwise)

Preceding gene: 119899675

Following gene: 119899673

Centisome position: 85.08

GC content: 67.7

Gene sequence:

>483_bases
ATGGCATCCGTCAACAAAGTCATTCTGATCGGCAACCTCGGCGCCGATCCGGAAAGCCGCTTCGCCCCCTCGGGCGATGC
GATCTGCAACATCCGTCTCGCGACGACCGAAAACTGGCGCGACAAGTCCACCGGAGAGCGCCGCGAAGCGACCGAGTGGC
ACCGGGTGTCGTTCTACGGCAAGCTCGCCGAAATCGCCGGCCAGTACTTGCGCAAGGGGAGCCAGGTCTATATCGAAGGC
AGCCTGCGCACGCGCAAGTGGCAGGACCAGAACGGCCAGGAGCGCTACACCACCGAGATCCGGGCCGACGAGATGAAGAT
GCTCGGCCGCCGCGAAGGTGGCGATGCGCCGATGCGCGGTGGGGACGACGGCTACAGCGCGCCCGCGCCACGCCAGCAGG
CCGCCCCTGCGCCCGCGTCGCGCCCGGCGCCGCAGCGCGATAGCGGCGGTTTCGGCGATTTCGACGACGACATCCCGTTC
TGA

Upstream 100 bases:

>100_bases
GATGACGCCTCCGCCGCCCCGGCCGCAGGTCGCGACGGCACGAAACTGACCGAAATCAGCGCCGGCCGCGCAGGCCGGCA
CGCATTCAAAGGAGAACCGG

Downstream 100 bases:

>100_bases
CATCGTTCCGCGGGCCGCGCACTCGCGTTGCGGCCCGGTTGGCAGGTAGCGCGGCCTCGCAGGCCACGGCGCTATGCTGA
CGTACTCAAGTCGGCGCACA

Product: single-strand DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MASVNKVILIGNLGADPESRFAPSGDAICNIRLATTENWRDKSTGERREATEWHRVSFYGKLAEIAGQYLRKGSQVYIEG
SLRTRKWQDQNGQERYTTEIRADEMKMLGRREGGDAPMRGGDDGYSAPAPRQQAAPAPASRPAPQRDSGGFGDFDDDIPF

Sequences:

>Translated_160_residues
MASVNKVILIGNLGADPESRFAPSGDAICNIRLATTENWRDKSTGERREATEWHRVSFYGKLAEIAGQYLRKGSQVYIEG
SLRTRKWQDQNGQERYTTEIRADEMKMLGRREGGDAPMRGGDDGYSAPAPRQQAAPAPASRPAPQRDSGGFGDFDDDIPF
>Mature_159_residues
ASVNKVILIGNLGADPESRFAPSGDAICNIRLATTENWRDKSTGERREATEWHRVSFYGKLAEIAGQYLRKGSQVYIEGS
LRTRKWQDQNGQERYTTEIRADEMKMLGRREGGDAPMRGGDDGYSAPAPRQQAAPAPASRPAPQRDSGGFGDFDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=113, Percent_Identity=34.5132743362832, Blast_Score=70, Evalue=9e-13,
Organism=Escherichia coli, GI1790494, Length=186, Percent_Identity=52.6881720430108, Blast_Score=178, Evalue=1e-46,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17709; Mature: 17578

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVNKVILIGNLGADPESRFAPSGDAICNIRLATTENWRDKSTGERREATEWHRVSFYG
CCCCCEEEEEECCCCCCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHH
KLAEIAGQYLRKGSQVYIEGSLRTRKWQDQNGQERYTTEIRADEMKMLGRREGGDAPMRG
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
GDDGYSAPAPRQQAAPAPASRPAPQRDSGGFGDFDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASVNKVILIGNLGADPESRFAPSGDAICNIRLATTENWRDKSTGERREATEWHRVSFYG
CCCCEEEEEECCCCCCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHH
KLAEIAGQYLRKGSQVYIEGSLRTRKWQDQNGQERYTTEIRADEMKMLGRREGGDAPMRG
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
GDDGYSAPAPRQQAAPAPASRPAPQRDSGGFGDFDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948488 [H]