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The map label for this gene is ybgI [C]

Identifier: 119899625

GI number: 119899625

Start: 3677837

End: 3678592

Strand: Reverse

Name: ybgI [C]

Synonym: azo3336

Alternate gene names: 119899625

Gene position: 3678592-3677837 (Counterclockwise)

Preceding gene: 119899627

Following gene: 119899623

Centisome position: 84.06

GC content: 65.34

Gene sequence:

>756_bases
ATGCAACTCGTCGAGCTGCAAAACCATCTGGATCGGCTGCTCGAAGCCCCACGGCTGCGGGATTATTGCCCAAACGGTTT
GCAAGTGGAAGGCCGCGGGGAGGTCCGCAAGGTGCTGTGCGGGGTGACTGCCAGCTTGTCTCTGGTCGAGGCCGCCGTTG
CCGGTGGATACGACGCGCTACTGGTTCACCACGGCTATTTCTGGCGGGGCGAGGACGGCCGCATCAGCGGCATTCGCAAG
CGCCGTCTGGCCGCGTTGCTGTCCCACGACATCAGTCTTTTTGCCTATCACCTGCCGCTCGATGCGCACCCTGAACTGGG
CAACAACGCGCAGTTGGGCAAGCTGATGGGATGGCGTGAATCTGGTCGCTTTGCCGATCAGGAACTGGGCTGGCTGGGCG
AACTGCCTGCGGCAAACCAGGGCGAACCCGCGGAGCAGGTGGCCAGGGCGCTGGCTGCGCGATTGGGGCGGGACCCGCTG
CTGGTTGGCGACGGTGCGCGTCCCGTCCGACGGCTTGCGTGGTGTACCGGCGGGGCCCAGGCCTACTTCGAGCAGGCCAT
CCTTGCCGGGGCCGATCTTTACGTGTCGGGTGAGATTTCCGAGCAGACGGTACACCTCGCGCGTGAGTCCGGGGTGCCTT
ACATCGCAGCGGGGCATCACGCCACCGAGCGCTACGGCGTTCGCGCACTAGCGGATTATCTGGCCCGTACGCTGGGCCTG
GAGGCCGACTTCCTCGATCTCGACAACCCCGTCTGA

Upstream 100 bases:

>100_bases
GGGACCACTTTGCTATTCGAGTGTCGGCGCGCGGCGCTGGGTAACCAGTGGGTCGCGGAACAATGGCCGCGCGAAACGGA
AAAAGTCGGAGTGATATCGG

Downstream 100 bases:

>100_bases
GGGCTCAGGCGGCCTTGCGTTCGCCCGCCTCGGGCGGCGGCGCGTCGGGCTCCGCGCGGTAAGGGCCGAGGTGCTGCTCG
AGAATGGCGGCGAGCAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MQLVELQNHLDRLLEAPRLRDYCPNGLQVEGRGEVRKVLCGVTASLSLVEAAVAGGYDALLVHHGYFWRGEDGRISGIRK
RRLAALLSHDISLFAYHLPLDAHPELGNNAQLGKLMGWRESGRFADQELGWLGELPAANQGEPAEQVARALAARLGRDPL
LVGDGARPVRRLAWCTGGAQAYFEQAILAGADLYVSGEISEQTVHLARESGVPYIAAGHHATERYGVRALADYLARTLGL
EADFLDLDNPV

Sequences:

>Translated_251_residues
MQLVELQNHLDRLLEAPRLRDYCPNGLQVEGRGEVRKVLCGVTASLSLVEAAVAGGYDALLVHHGYFWRGEDGRISGIRK
RRLAALLSHDISLFAYHLPLDAHPELGNNAQLGKLMGWRESGRFADQELGWLGELPAANQGEPAEQVARALAARLGRDPL
LVGDGARPVRRLAWCTGGAQAYFEQAILAGADLYVSGEISEQTVHLARESGVPYIAAGHHATERYGVRALADYLARTLGL
EADFLDLDNPV
>Mature_251_residues
MQLVELQNHLDRLLEAPRLRDYCPNGLQVEGRGEVRKVLCGVTASLSLVEAAVAGGYDALLVHHGYFWRGEDGRISGIRK
RRLAALLSHDISLFAYHLPLDAHPELGNNAQLGKLMGWRESGRFADQELGWLGELPAANQGEPAEQVARALAARLGRDPL
LVGDGARPVRRLAWCTGGAQAYFEQAILAGADLYVSGEISEQTVHLARESGVPYIAAGHHATERYGVRALADYLARTLGL
EADFLDLDNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=251, Percent_Identity=48.605577689243, Blast_Score=240, Evalue=8e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27335; Mature: 27335

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLVELQNHLDRLLEAPRLRDYCPNGLQVEGRGEVRKVLCGVTASLSLVEAAVAGGYDAL
CCHHHHHHHHHHHHCCCCHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVHHGYFWRGEDGRISGIRKRRLAALLSHDISLFAYHLPLDAHPELGNNAQLGKLMGWRE
EEECCEEEECCCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCHHHHHCCCC
SGRFADQELGWLGELPAANQGEPAEQVARALAARLGRDPLLVGDGARPVRRLAWCTGGAQ
CCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCHH
AYFEQAILAGADLYVSGEISEQTVHLARESGVPYIAAGHHATERYGVRALADYLARTLGL
HHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC
EADFLDLDNPV
CCCCCCCCCCC
>Mature Secondary Structure
MQLVELQNHLDRLLEAPRLRDYCPNGLQVEGRGEVRKVLCGVTASLSLVEAAVAGGYDAL
CCHHHHHHHHHHHHCCCCHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVHHGYFWRGEDGRISGIRKRRLAALLSHDISLFAYHLPLDAHPELGNNAQLGKLMGWRE
EEECCEEEECCCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCHHHHHCCCC
SGRFADQELGWLGELPAANQGEPAEQVARALAARLGRDPLLVGDGARPVRRLAWCTGGAQ
CCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCHH
AYFEQAILAGADLYVSGEISEQTVHLARESGVPYIAAGHHATERYGVRALADYLARTLGL
HHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC
EADFLDLDNPV
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]