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The map label for this gene is 119899586

Identifier: 119899586

GI number: 119899586

Start: 3635261

End: 3635983

Strand: Reverse

Name: 119899586

Synonym: azo3297

Alternate gene names: NA

Gene position: 3635983-3635261 (Counterclockwise)

Preceding gene: 119899588

Following gene: 119899585

Centisome position: 83.09

GC content: 71.23

Gene sequence:

>723_bases
ATGAAGGGCGCGTTCCAGCTTCTGCTGCCCTTGCTGGCCGGCTTTGCGCTGGCGATGCTGACGCTGCAGCTCGGCAACTG
GCAGCTGCGGCGCGCCGCTGAAAAGGCGGCGCTGCAACGGGTAGCCGCCGAACGGGCCGCCACGGGCGCCCGCGCGCTGC
CGGCAACCGCCACCGCCGAGGAGTGGCAGCGTGTGCGCATCACCGGGCGGTGGTTGGCGCACGCCACGGTCTATCTCGAC
AACCGCAGCTACAACGGGCGCCCGGGTTTCCACGTGCTGACGCCGGTGGAACTGGCGGACGGTTCCGGCAGCGTGCTGGT
CAATCGTGGATGGGTTGCGGCGGGTGTGGATCGGCGCCAGCTTCCGGCGGTGCTGCCCGCGGGCGAGGATGCGGAACTCG
AAGGGGTGGTGCGCGTGCCGCAGCATTCGCCCTTTACGCTGGCCGACTCGCCGGGGCAGGGCCGGCTGTGGCAGTACCTT
GACCTGGCGCACTACCGCGCACAGACGGGTGTGGCCGTTGCGGAGTGGATCGTGCAGCAAGCGTCGCCCTCGGCAGACGG
GCTGGTGCGCGACTGGCCACAGCCGGATGCCGGCATCGAGCGCCACCGCGGCTATGCCCTGCAGTGGTACGGGCTGGCGG
CGCTGGCGGCGGGCCTGACGCTGCGTTACGGCTGGCGGATTTTCCGGGGGAGGCACCGTGACGGTCATGCCGCTCGCGTC
TGA

Upstream 100 bases:

>100_bases
AGCCGAGGCTGGCGACGATCAGGACGAGGAAGGCGATGACGACGATGCGCATGGCGGAACTCCCGGGGATTCAGCTTCAG
TTTAGGGGAATCGGCGCGCG

Downstream 100 bases:

>100_bases
TCCGCTGCGCCCGGCCCCGCAGCCCTCGCCCGACGCGGTGTGGCGCGGCCGCCGCACCCTGTTGCTGCTCGCCGCCGTGT
GCGTGCTGCCGGTGATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Cytochrome Oxidase; Transmembrane Cytochrome Oxidase Complex Biogenesis Factor; SURF1-Like Protein; Cytochrome C Oxidase Assembly; Surfeit Locus 1 Family Protein; Cytochrome Oxidase Complex Biogenesis Factor; Cytochrome Oxidase Assembly Protein SurF1

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKGAFQLLLPLLAGFALAMLTLQLGNWQLRRAAEKAALQRVAAERAATGARALPATATAEEWQRVRITGRWLAHATVYLD
NRSYNGRPGFHVLTPVELADGSGSVLVNRGWVAAGVDRRQLPAVLPAGEDAELEGVVRVPQHSPFTLADSPGQGRLWQYL
DLAHYRAQTGVAVAEWIVQQASPSADGLVRDWPQPDAGIERHRGYALQWYGLAALAAGLTLRYGWRIFRGRHRDGHAARV

Sequences:

>Translated_240_residues
MKGAFQLLLPLLAGFALAMLTLQLGNWQLRRAAEKAALQRVAAERAATGARALPATATAEEWQRVRITGRWLAHATVYLD
NRSYNGRPGFHVLTPVELADGSGSVLVNRGWVAAGVDRRQLPAVLPAGEDAELEGVVRVPQHSPFTLADSPGQGRLWQYL
DLAHYRAQTGVAVAEWIVQQASPSADGLVRDWPQPDAGIERHRGYALQWYGLAALAAGLTLRYGWRIFRGRHRDGHAARV
>Mature_240_residues
MKGAFQLLLPLLAGFALAMLTLQLGNWQLRRAAEKAALQRVAAERAATGARALPATATAEEWQRVRITGRWLAHATVYLD
NRSYNGRPGFHVLTPVELADGSGSVLVNRGWVAAGVDRRQLPAVLPAGEDAELEGVVRVPQHSPFTLADSPGQGRLWQYL
DLAHYRAQTGVAVAEWIVQQASPSADGLVRDWPQPDAGIERHRGYALQWYGLAALAAGLTLRYGWRIFRGRHRDGHAARV

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321550, Length=168, Percent_Identity=27.3809523809524, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17864366, Length=252, Percent_Identity=30.952380952381, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26278; Mature: 26278

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGAFQLLLPLLAGFALAMLTLQLGNWQLRRAAEKAALQRVAAERAATGARALPATATAE
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
EWQRVRITGRWLAHATVYLDNRSYNGRPGFHVLTPVELADGSGSVLVNRGWVAAGVDRRQ
HHHEEEEEEEEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCEEEECCEEEECCCHHH
LPAVLPAGEDAELEGVVRVPQHSPFTLADSPGQGRLWQYLDLAHYRAQTGVAVAEWIVQQ
CCEECCCCCCCCCCCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
ASPSADGLVRDWPQPDAGIERHRGYALQWYGLAALAAGLTLRYGWRIFRGRHRDGHAARV
CCCCCCCCCCCCCCCCCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC
>Mature Secondary Structure
MKGAFQLLLPLLAGFALAMLTLQLGNWQLRRAAEKAALQRVAAERAATGARALPATATAE
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
EWQRVRITGRWLAHATVYLDNRSYNGRPGFHVLTPVELADGSGSVLVNRGWVAAGVDRRQ
HHHEEEEEEEEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCEEEECCEEEECCCHHH
LPAVLPAGEDAELEGVVRVPQHSPFTLADSPGQGRLWQYLDLAHYRAQTGVAVAEWIVQQ
CCEECCCCCCCCCCCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
ASPSADGLVRDWPQPDAGIERHRGYALQWYGLAALAAGLTLRYGWRIFRGRHRDGHAARV
CCCCCCCCCCCCCCCCCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA