Click here to switch to the map view.

The map label for this gene is yibD [C]

Identifier: 119899549

GI number: 119899549

Start: 3593146

End: 3594084

Strand: Direct

Name: yibD [C]

Synonym: azo3260

Alternate gene names: 119899549

Gene position: 3593146-3594084 (Clockwise)

Preceding gene: 119899547

Following gene: 119899550

Centisome position: 82.11

GC content: 61.02

Gene sequence:

>939_bases
ATGCTGTCTGTCGTCTTTGCCACGTTTAACGGCAAAAGAACCCTGCCGACGATGCTCGAAGCACTGTGCCGTCTGGAGCC
CCCCCCGGGAAGCTTCGAGCTGATAGCGGTCGATAACGGCAGCACGGATGTGTCAATTGAGGTGCTGCAAAGTTTCGCCG
ACCGTTTGCCGCTTACCATTTTGGAGCAGCCCGCCCGAGGCAAGAACCGCGCGCTCAACTTGGGCATTTCCCGGGTGCGG
GGGGATCTTGTCGTGTTTACCGACGACGACGTTGTTCCTCGGGAAGACTGGCTCGTGGCCCTCCATCGCGCCGCGGAGGA
ACGGGCCCAAGCAAGTCTTTTTGGCGGCACCATCCTTCCGCACTGGGAGATCGAACCGCCGCACTGGCTGCTCAACTCGG
CGCCGCTCGGCGTGACCTATGCAATCACAGCCCCTGATATTCCTTCCGGCCCGATCTTTCCAGGCTTGATCTGGGGACCA
AATATGATGGTTCGACGAGCGGTACTCGATGCGGGACACCGCTTCAACGAGAACGTCGGCCCTAGCGCGGGACAGTACAT
CATGGGCAGCGAGACGGAGTTCAACATCCGCATCGCTCAACACGGCTGCCAGACCTGGTTCTGTCCGGATGCCGTAGTGG
GCCATATCATCCGGGACTTCCAGATGACTCAGGAGTGGGTGATCCGTCGCGGGTATCGCTTCGGACGCAATAAGTGCCTG
CAGGACACCGCAGCCCAGACGGTCGCCTCCCCCTGGCTGTTCAACCTTGCAAACTTTCCCCGCTGGATGGTGCGAAAGGT
CATCCAGGATTCGATCGGCGGGCACCTGGCGCGCGCCCTCGGCAACGAAGCTGCAGCCGTCGCACGGCTATGGGACGCTG
CTTTCTACCGGGGCTACATCTTCCAGGCTCAGCAGCTGCGGACGGGACAAAGTGGGTAA

Upstream 100 bases:

>100_bases
GTTGGGGTAATCTCCCGGAAAAGCAACAGCCTGCCGGAGCCCGCGGCTTTACCTGCCCGGAGCCTGATAGGGTACTCACT
CAGGGAATAGGTGGAAGTTC

Downstream 100 bases:

>100_bases
GGGGCCGCAGGCCGCGCTGCCAGTCGTCGCCGGCCGGAAGATCCTGCTCACCAGTCGGTCCGGCCAATTGGGCGGTATGG
AACTGCGGATGGCGGACGAG

Product: glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase; Glycosyltransferase Protein; Glycosyl Transferase Family 2 Protein; Succinoglycan Biosynthesis Protein; Family Glycosyltransferase; B-Glycosyltransferase; Sulfatase; Glycosyltransferase Involved In Cell Wall Biogenesis; Group 2 Glycosyl Transferase; Arylsulfatase; Glycosyltransferase-Like

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MLSVVFATFNGKRTLPTMLEALCRLEPPPGSFELIAVDNGSTDVSIEVLQSFADRLPLTILEQPARGKNRALNLGISRVR
GDLVVFTDDDVVPREDWLVALHRAAEERAQASLFGGTILPHWEIEPPHWLLNSAPLGVTYAITAPDIPSGPIFPGLIWGP
NMMVRRAVLDAGHRFNENVGPSAGQYIMGSETEFNIRIAQHGCQTWFCPDAVVGHIIRDFQMTQEWVIRRGYRFGRNKCL
QDTAAQTVASPWLFNLANFPRWMVRKVIQDSIGGHLARALGNEAAAVARLWDAAFYRGYIFQAQQLRTGQSG

Sequences:

>Translated_312_residues
MLSVVFATFNGKRTLPTMLEALCRLEPPPGSFELIAVDNGSTDVSIEVLQSFADRLPLTILEQPARGKNRALNLGISRVR
GDLVVFTDDDVVPREDWLVALHRAAEERAQASLFGGTILPHWEIEPPHWLLNSAPLGVTYAITAPDIPSGPIFPGLIWGP
NMMVRRAVLDAGHRFNENVGPSAGQYIMGSETEFNIRIAQHGCQTWFCPDAVVGHIIRDFQMTQEWVIRRGYRFGRNKCL
QDTAAQTVASPWLFNLANFPRWMVRKVIQDSIGGHLARALGNEAAAVARLWDAAFYRGYIFQAQQLRTGQSG
>Mature_312_residues
MLSVVFATFNGKRTLPTMLEALCRLEPPPGSFELIAVDNGSTDVSIEVLQSFADRLPLTILEQPARGKNRALNLGISRVR
GDLVVFTDDDVVPREDWLVALHRAAEERAQASLFGGTILPHWEIEPPHWLLNSAPLGVTYAITAPDIPSGPIFPGLIWGP
NMMVRRAVLDAGHRFNENVGPSAGQYIMGSETEFNIRIAQHGCQTWFCPDAVVGHIIRDFQMTQEWVIRRGYRFGRNKCL
QDTAAQTVASPWLFNLANFPRWMVRKVIQDSIGGHLARALGNEAAAVARLWDAAFYRGYIFQAQQLRTGQSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 34690; Mature: 34690

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVVFATFNGKRTLPTMLEALCRLEPPPGSFELIAVDNGSTDVSIEVLQSFADRLPLTI
CCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEE
LEQPARGKNRALNLGISRVRGDLVVFTDDDVVPREDWLVALHRAAEERAQASLFGGTILP
ECCCCCCCCCEEHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
HWEIEPPHWLLNSAPLGVTYAITAPDIPSGPIFPGLIWGPNMMVRRAVLDAGHRFNENVG
CCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHCCHHCCCCCC
PSAGQYIMGSETEFNIRIAQHGCQTWFCPDAVVGHIIRDFQMTQEWVIRRGYRFGRNKCL
CCCCCEEECCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
QDTAAQTVASPWLFNLANFPRWMVRKVIQDSIGGHLARALGNEAAAVARLWDAAFYRGYI
HHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FQAQQLRTGQSG
HHHHHHHCCCCC
>Mature Secondary Structure
MLSVVFATFNGKRTLPTMLEALCRLEPPPGSFELIAVDNGSTDVSIEVLQSFADRLPLTI
CCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEE
LEQPARGKNRALNLGISRVRGDLVVFTDDDVVPREDWLVALHRAAEERAQASLFGGTILP
ECCCCCCCCCEEHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
HWEIEPPHWLLNSAPLGVTYAITAPDIPSGPIFPGLIWGPNMMVRRAVLDAGHRFNENVG
CCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHCCHHCCCCCC
PSAGQYIMGSETEFNIRIAQHGCQTWFCPDAVVGHIIRDFQMTQEWVIRRGYRFGRNKCL
CCCCCEEECCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
QDTAAQTVASPWLFNLANFPRWMVRKVIQDSIGGHLARALGNEAAAVARLWDAAFYRGYI
HHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FQAQQLRTGQSG
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA