Click here to switch to the map view.

The map label for this gene is wzxC [H]

Identifier: 119899545

GI number: 119899545

Start: 3588679

End: 3590055

Strand: Direct

Name: wzxC [H]

Synonym: azo3256

Alternate gene names: 119899545

Gene position: 3588679-3590055 (Clockwise)

Preceding gene: 119899544

Following gene: 119899546

Centisome position: 82.01

GC content: 59.19

Gene sequence:

>1377_bases
GTGTCGCGACTCCTGACACCGGACGAGATCGGCATCTTCTCAGTCTCCATCTCGCTGATTGGTTTCGCTCATATTCTTAG
AGACTTCGGCGTCGGGCAATACCTGATCCAATCTCGCGAAATCGACCTCGCTCGCATGCGCGCGGCGTTCACCGTCATGC
TCCTGACCTCGTGGACCATCGCCCTCGGCATCTACCTAGTGCGCGAACCGGTCGCCCACTTCTACGACAAGCCGGGCATG
GCGGATGTACTGGGTTTAATTGCCCTCAATTTCCTGCTGATTCCCTTTGGTGCACCGATCATGTCCGTGCTTAATCGGGA
GCTGCTGTTCGGTCGCATCGCGCTGGTCAATCTGTCGAACAACGCAATACAGCACGCCGTGACTATCGCCTGCGCGTTCG
CCGGCCTGAGCTACATGAGTCTGGCGTGGGGTTCCATCGCCGGCATGCTCTCCAACGTAATCATTCTAAGTCTTATGAGG
CCGCAGTTCGCCTTGTTGCGCCCCACGATGAACGGACTGAGAAACGTAATGAACTTCGGCTACAAGTTCAGCGCCAACTC
CTTGGTACTCGAGTTCGGCAACAACGCCGGTGACCTCATCTTCGGGCGCACCCTGGGCTTTTCGGCAGTGGCCTATTTCA
GCCGCTCACTCGCCGTCCTTAACCTTGCCACGGGGCAGGTGTTGCGTCTTGTTAACAGCGTGTTCCTGCCGGCATTCGCA
GCGCAGATCCGGTCCGGCAAGGCCCCCGCCGAGTTGTACGCGAAGTCGATCACTCCGATCGTAGGCATTACGGTGCCATT
ACTCGCCTTCGTAGGGTTGATGGCCGAACCCCTGATCGACCTGATGTTCGGCTCGCAGTGGGAACAGGCCGCCACGCTCG
CATCGATACTCAGTGTATCGGCGATGCTGGGCGCTCCCTTCGCACTGATCGGCACCGCACTCGTGGCGAACGGCCAGGTG
GGGTTGCATCTCAAGTTGCAGGTGGGCATTCAGTGCATCCGCATACCCGTGCTGCTGTTGTCGATTTGGTTGTCGCTCGA
GGAAACCATCGTGGCATTGGTTGTTGCGTCCGCACTGTTCGTCTACCCACAGGACGTCTGGATGCTCAAGAAGGCATTCA
ATCTGTCGCCACGCCGCCTTTGGGCGGCCGTGCGGTCGGCCTATCTTCTGGCGCCACTATCTCTACTCGCGCCCGCGGTA
CTCCGGACGCTTGACGTAGCCCGCGCATGGAATTTGCCGGACATGATCCTGCTGTGCGCTTGCGGTGCCCTTTTTGGGGT
CTCCTGGCTGGCGGCCGTCTTTCTGATCCGCCATCCGCTCCGGGATGAAGTGGAGAACCTGTTCACGACCGTGTTTAGTC
GACGATCGGCCGGCTAA

Upstream 100 bases:

>100_bases
CCACCCCGTCCTCCCCACCATGGCCATTCGAAGAGCCCTCGGCATCAACGGCGCAACCCAAGCCGCCACCTTTCTGCTCA
GTCTAGGTAGCGTCGTCATC

Downstream 100 bases:

>100_bases
CACCATTGGCCCCACACGACCCAACACTTGCACGTTCGACAAGGGGACAGACGATGGACAGAACACGAACAGCGCACGCA
GAGACAATCGATAACGTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MSRLLTPDEIGIFSVSISLIGFAHILRDFGVGQYLIQSREIDLARMRAAFTVMLLTSWTIALGIYLVREPVAHFYDKPGM
ADVLGLIALNFLLIPFGAPIMSVLNRELLFGRIALVNLSNNAIQHAVTIACAFAGLSYMSLAWGSIAGMLSNVIILSLMR
PQFALLRPTMNGLRNVMNFGYKFSANSLVLEFGNNAGDLIFGRTLGFSAVAYFSRSLAVLNLATGQVLRLVNSVFLPAFA
AQIRSGKAPAELYAKSITPIVGITVPLLAFVGLMAEPLIDLMFGSQWEQAATLASILSVSAMLGAPFALIGTALVANGQV
GLHLKLQVGIQCIRIPVLLLSIWLSLEETIVALVVASALFVYPQDVWMLKKAFNLSPRRLWAAVRSAYLLAPLSLLAPAV
LRTLDVARAWNLPDMILLCACGALFGVSWLAAVFLIRHPLRDEVENLFTTVFSRRSAG

Sequences:

>Translated_458_residues
MSRLLTPDEIGIFSVSISLIGFAHILRDFGVGQYLIQSREIDLARMRAAFTVMLLTSWTIALGIYLVREPVAHFYDKPGM
ADVLGLIALNFLLIPFGAPIMSVLNRELLFGRIALVNLSNNAIQHAVTIACAFAGLSYMSLAWGSIAGMLSNVIILSLMR
PQFALLRPTMNGLRNVMNFGYKFSANSLVLEFGNNAGDLIFGRTLGFSAVAYFSRSLAVLNLATGQVLRLVNSVFLPAFA
AQIRSGKAPAELYAKSITPIVGITVPLLAFVGLMAEPLIDLMFGSQWEQAATLASILSVSAMLGAPFALIGTALVANGQV
GLHLKLQVGIQCIRIPVLLLSIWLSLEETIVALVVASALFVYPQDVWMLKKAFNLSPRRLWAAVRSAYLLAPLSLLAPAV
LRTLDVARAWNLPDMILLCACGALFGVSWLAAVFLIRHPLRDEVENLFTTVFSRRSAG
>Mature_457_residues
SRLLTPDEIGIFSVSISLIGFAHILRDFGVGQYLIQSREIDLARMRAAFTVMLLTSWTIALGIYLVREPVAHFYDKPGMA
DVLGLIALNFLLIPFGAPIMSVLNRELLFGRIALVNLSNNAIQHAVTIACAFAGLSYMSLAWGSIAGMLSNVIILSLMRP
QFALLRPTMNGLRNVMNFGYKFSANSLVLEFGNNAGDLIFGRTLGFSAVAYFSRSLAVLNLATGQVLRLVNSVFLPAFAA
QIRSGKAPAELYAKSITPIVGITVPLLAFVGLMAEPLIDLMFGSQWEQAATLASILSVSAMLGAPFALIGTALVANGQVG
LHLKLQVGIQCIRIPVLLLSIWLSLEETIVALVVASALFVYPQDVWMLKKAFNLSPRRLWAAVRSAYLLAPLSLLAPAVL
RTLDVARAWNLPDMILLCACGALFGVSWLAAVFLIRHPLRDEVENLFTTVFSRRSAG

Specific function: Lipopolysaccharide biosynthesis. [C]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788359, Length=348, Percent_Identity=23.2758620689655, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 49682; Mature: 49551

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLLTPDEIGIFSVSISLIGFAHILRDFGVGQYLIQSREIDLARMRAAFTVMLLTSWTI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ALGIYLVREPVAHFYDKPGMADVLGLIALNFLLIPFGAPIMSVLNRELLFGRIALVNLSN
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCC
NAIQHAVTIACAFAGLSYMSLAWGSIAGMLSNVIILSLMRPQFALLRPTMNGLRNVMNFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
YKFSANSLVLEFGNNAGDLIFGRTLGFSAVAYFSRSLAVLNLATGQVLRLVNSVFLPAFA
CEECCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQIRSGKAPAELYAKSITPIVGITVPLLAFVGLMAEPLIDLMFGSQWEQAATLASILSVS
HHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AMLGAPFALIGTALVANGQVGLHLKLQVGIQCIRIPVLLLSIWLSLEETIVALVVASALF
HHHCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYPQDVWMLKKAFNLSPRRLWAAVRSAYLLAPLSLLAPAVLRTLDVARAWNLPDMILLCA
HCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
CGALFGVSWLAAVFLIRHPLRDEVENLFTTVFSRRSAG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SRLLTPDEIGIFSVSISLIGFAHILRDFGVGQYLIQSREIDLARMRAAFTVMLLTSWTI
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ALGIYLVREPVAHFYDKPGMADVLGLIALNFLLIPFGAPIMSVLNRELLFGRIALVNLSN
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCC
NAIQHAVTIACAFAGLSYMSLAWGSIAGMLSNVIILSLMRPQFALLRPTMNGLRNVMNFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
YKFSANSLVLEFGNNAGDLIFGRTLGFSAVAYFSRSLAVLNLATGQVLRLVNSVFLPAFA
CEECCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQIRSGKAPAELYAKSITPIVGITVPLLAFVGLMAEPLIDLMFGSQWEQAATLASILSVS
HHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AMLGAPFALIGTALVANGQVGLHLKLQVGIQCIRIPVLLLSIWLSLEETIVALVVASALF
HHHCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYPQDVWMLKKAFNLSPRRLWAAVRSAYLLAPLSLLAPAVLRTLDVARAWNLPDMILLCA
HCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
CGALFGVSWLAAVFLIRHPLRDEVENLFTTVFSRRSAG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]