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The map label for this gene is rnaSA [H]

Identifier: 119899530

GI number: 119899530

Start: 3573175

End: 3573540

Strand: Direct

Name: rnaSA [H]

Synonym: azo3241

Alternate gene names: 119899530

Gene position: 3573175-3573540 (Clockwise)

Preceding gene: 119899529

Following gene: 119899531

Centisome position: 81.65

GC content: 71.04

Gene sequence:

>366_bases
ATGACTCGCACGACCGCCCTGTTCCAGCGCATCGTCGCCGCGCTCGCCATCGCGCTTGCGCTCGCGGGCTGCTACGCGGA
CAGCGAGGCCCGCGGCAGTGCGCTGCCGCCCGAAGCGGTCGCCACGCTGCAATTGATCGCCCGCGGCGGACCTTACCCCT
ACCGCAAGGACGGAACCGTGTTCCAGAACCGCGAGGGACGCCTGCCTGCCCAACCGCGGGGCTACTACCGGGAGTTCACG
GTGCCCACGCCCGGCTCCCGCGACCGCGGCGCGCGGCGCATCGTGACCGGGGGCGACCCACCCGCGGTGTACTACTACAC
CGAGGACCACTACCGCAGCTTCAGACGGATCGAACCGGCACCATGA

Upstream 100 bases:

>100_bases
GCCGACTTCATGCACACGCTGATCGAACATTACGGCATTCGCCCCGACGCCACGCAAGAAGCGGCGCGCCGCGCCCGCGC
CTGACCTCACGCTGAACCTG

Downstream 100 bases:

>100_bases
CGCCCGCGCCCGCGCACGACACGCTTCCCGCCCTGCTCGCCAACCCCGCCCGTGCCGGCGTACGCCCGCTCCCGCCCGGC
ACTGCCGCCAACCTGAAGGC

Product: ribonuclease

Products: NA

Alternate protein names: RNase Sa [H]

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTRTTALFQRIVAALAIALALAGCYADSEARGSALPPEAVATLQLIARGGPYPYRKDGTVFQNREGRLPAQPRGYYREFT
VPTPGSRDRGARRIVTGGDPPAVYYYTEDHYRSFRRIEPAP

Sequences:

>Translated_121_residues
MTRTTALFQRIVAALAIALALAGCYADSEARGSALPPEAVATLQLIARGGPYPYRKDGTVFQNREGRLPAQPRGYYREFT
VPTPGSRDRGARRIVTGGDPPAVYYYTEDHYRSFRRIEPAP
>Mature_120_residues
TRTTALFQRIVAALAIALALAGCYADSEARGSALPPEAVATLQLIARGGPYPYRKDGTVFQNREGRLPAQPRGYYREFTV
PTPGSRDRGARRIVTGGDPPAVYYYTEDHYRSFRRIEPAP

Specific function: Unknown

COG id: COG4290

COG function: function code F; Guanyl-specific ribonuclease Sa

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonuclease N1/T1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000026
- InterPro:   IPR016191 [H]

Pfam domain/function: PF00545 Ribonuclease [H]

EC number: =3.1.27.3 [H]

Molecular weight: Translated: 13376; Mature: 13245

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTTALFQRIVAALAIALALAGCYADSEARGSALPPEAVATLQLIARGGPYPYRKDGTV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCE
FQNREGRLPAQPRGYYREFTVPTPGSRDRGARRIVTGGDPPAVYYYTEDHYRSFRRIEPA
EECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEEEECHHHHHHHCCCCC
P
C
>Mature Secondary Structure 
TRTTALFQRIVAALAIALALAGCYADSEARGSALPPEAVATLQLIARGGPYPYRKDGTV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCE
FQNREGRLPAQPRGYYREFTVPTPGSRDRGARRIVTGGDPPAVYYYTEDHYRSFRRIEPA
EECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEEEECHHHHHHHCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3098582; 3118883; 1654932; 8396032; 9757110; 9819211; 11455593 [H]