| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is pldA [H]
Identifier: 119899499
GI number: 119899499
Start: 3537116
End: 3538288
Strand: Reverse
Name: pldA [H]
Synonym: azo3210
Alternate gene names: 119899499
Gene position: 3538288-3537116 (Counterclockwise)
Preceding gene: 119899500
Following gene: 119899498
Centisome position: 80.86
GC content: 70.5
Gene sequence:
>1173_bases TTGAGCCTACGGCCCTGCTTGTCCTTGTTGTGCCTGCTGGTGGGCGGCGCGGCGGTTGCGGCGCCGGCCGCCGCGCCGGA TGCGTGGTTGCTGGCCAGTCCCGAGCCGCGCGTGGTTCCGGGGCAACCCTTCGAGGTGATCGTGATCGCCCCGTCCGCGC TGGGCGAATGGCCGGCGACACTGCCGGCGCAGATCGAGCTTGCGGCGCCCGGCCCGCGGATTGCCATCGACCTGGTGCCG GCCAACGTGCCGGCGCAGGGCGGCCAGCGCCGCTACATCGGCCACTGGCCGCGCGAGGTGGTGGGCGTGGCGACGCTGTC GCTGCGCGAGGCGGCCTCTGCGCGGCTGCTGATGGACGCCGCGGCGGCGAGCCGCAGTCCGGTTGAGGTCGCGCGCTCGG TGCCGGTCGACGCGGCAGCCGATGTCGCCGCGCAGGCGCCGGGCGCGGAGCCGGCCCAGCCGGCCGCGCTCGGCTTTCAC GAGCCGATGTACTTCGTCGCCGGGGGGCGCAATCCGCGCTCGGCGCGCTATCAGCTCAGCTTCCGCTACCGCATCTTCGA CCAGCAGGGCGTGGTTGCCGAGGCGCTACCGGTCACGCGCGGGCTGTACTTCGGCTTCACCCAGACCTCGGTGTGGGACC TGGAGTCCGATTCCAAGCCCTTCCGTGACACCAGCTTCCGCCCCTCGCTGTTCTACCAGTGGAAGCTGCTCGACCCGAGC GATGGCGCCTCGCTGACGCTCGCCGGCGGCTACGAGCATGAATCGAACGGCCGCAGCGGACTGGAGTCGCGCAGCATCGA CACCTTCTTCGTGCGCGGCGACGCGCGCTACTACTTCGGCGACGGCCAAACCTACTTCGCGGTGGCGCCCAAGGCGTGGC ACTACATCGACAAGGACGACAACCCGGACATCACACGCTACCGCGGTTACGCGGAACTCGGCCTGCGCTTCGGGCGCGAC GACGGCCTGCTGCTCGCCGCCCAGCTGCGCCGCGGCACCGCCGGAGTCGGCAGCACGCAGCTCGATCTCTCCTATCCGCT GCGCCGCAGCGTGTTCTCGGGCGTCGGCGCCTTCCTGCACCTGCAGTACTTCAACGGCTATGGCGAAACCCTGCTGGACT ACAACGAGGCGCGTTCGCCGCAGATTAGAATCGGCCTTTCCCTCGTCAGATGA
Upstream 100 bases:
>100_bases GCAAGGCGCCCTTCTTGTTTGAGCCATCGAAAACTTTGCTGACGCCCCGGCCGGGCGCTGCTCGCTAGAATCGCGCTGTT GTCCGTTCGGGGAGTCCGAA
Downstream 100 bases:
>100_bases GCGCCGCGGGCGCAAGGAGATCCCATGACCCATGCCATCCGCTTCCACCAGACGGGCGGTCCCGAAGTGCTGCAGTGGGA GGAGGTCGAGCCGGGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Detergent-resistant phospholipase A; DR-phospholipase A; Outer membrane phospholipase A; OM PLA; OMPLA; Phosphatidylcholine 1-acylhydrolase [H]
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MSLRPCLSLLCLLVGGAAVAAPAAAPDAWLLASPEPRVVPGQPFEVIVIAPSALGEWPATLPAQIELAAPGPRIAIDLVP ANVPAQGGQRRYIGHWPREVVGVATLSLREAASARLLMDAAAASRSPVEVARSVPVDAAADVAAQAPGAEPAQPAALGFH EPMYFVAGGRNPRSARYQLSFRYRIFDQQGVVAEALPVTRGLYFGFTQTSVWDLESDSKPFRDTSFRPSLFYQWKLLDPS DGASLTLAGGYEHESNGRSGLESRSIDTFFVRGDARYYFGDGQTYFAVAPKAWHYIDKDDNPDITRYRGYAELGLRFGRD DGLLLAAQLRRGTAGVGSTQLDLSYPLRRSVFSGVGAFLHLQYFNGYGETLLDYNEARSPQIRIGLSLVR
Sequences:
>Translated_390_residues MSLRPCLSLLCLLVGGAAVAAPAAAPDAWLLASPEPRVVPGQPFEVIVIAPSALGEWPATLPAQIELAAPGPRIAIDLVP ANVPAQGGQRRYIGHWPREVVGVATLSLREAASARLLMDAAAASRSPVEVARSVPVDAAADVAAQAPGAEPAQPAALGFH EPMYFVAGGRNPRSARYQLSFRYRIFDQQGVVAEALPVTRGLYFGFTQTSVWDLESDSKPFRDTSFRPSLFYQWKLLDPS DGASLTLAGGYEHESNGRSGLESRSIDTFFVRGDARYYFGDGQTYFAVAPKAWHYIDKDDNPDITRYRGYAELGLRFGRD DGLLLAAQLRRGTAGVGSTQLDLSYPLRRSVFSGVGAFLHLQYFNGYGETLLDYNEARSPQIRIGLSLVR >Mature_389_residues SLRPCLSLLCLLVGGAAVAAPAAAPDAWLLASPEPRVVPGQPFEVIVIAPSALGEWPATLPAQIELAAPGPRIAIDLVPA NVPAQGGQRRYIGHWPREVVGVATLSLREAASARLLMDAAAASRSPVEVARSVPVDAAADVAAQAPGAEPAQPAALGFHE PMYFVAGGRNPRSARYQLSFRYRIFDQQGVVAEALPVTRGLYFGFTQTSVWDLESDSKPFRDTSFRPSLFYQWKLLDPSD GASLTLAGGYEHESNGRSGLESRSIDTFFVRGDARYYFGDGQTYFAVAPKAWHYIDKDDNPDITRYRGYAELGLRFGRDD GLLLAAQLRRGTAGVGSTQLDLSYPLRRSVFSGVGAFLHLQYFNGYGETLLDYNEARSPQIRIGLSLVR
Specific function: Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities [H]
COG id: COG2829
COG function: function code M; Outer membrane phospholipase A
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein. Note=One of the very few enzymes located there (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phospholipase A1 family [H]
Homologues:
Organism=Escherichia coli, GI2367300, Length=206, Percent_Identity=34.4660194174757, Blast_Score=98, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003187 [H]
Pfam domain/function: PF02253 PLA1 [H]
EC number: =3.1.1.32; =3.1.1.4 [H]
Molecular weight: Translated: 42247; Mature: 42116
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRPCLSLLCLLVGGAAVAAPAAAPDAWLLASPEPRVVPGQPFEVIVIAPSALGEWPAT CCHHHHHHHHHHHHCCHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCC LPAQIELAAPGPRIAIDLVPANVPAQGGQRRYIGHWPREVVGVATLSLREAASARLLMDA CCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAASRSPVEVARSVPVDAAADVAAQAPGAEPAQPAALGFHEPMYFVAGGRNPRSARYQLS HHCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEE FRYRIFDQQGVVAEALPVTRGLYFGFTQTSVWDLESDSKPFRDTSFRPSLFYQWKLLDPS EEEEEECCCCCCHHHHHHHCCEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCC DGASLTLAGGYEHESNGRSGLESRSIDTFFVRGDARYYFGDGQTYFAVAPKAWHYIDKDD CCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCEEEEECCCCEEECCCCC NPDITRYRGYAELGLRFGRDDGLLLAAQLRRGTAGVGSTQLDLSYPLRRSVFSGVGAFLH CCCHHHCCCHHHHCEEECCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCCEEEE LQYFNGYGETLLDYNEARSPQIRIGLSLVR EEEECCCCCHHHCCCCCCCCEEEEEEEECC >Mature Secondary Structure SLRPCLSLLCLLVGGAAVAAPAAAPDAWLLASPEPRVVPGQPFEVIVIAPSALGEWPAT CHHHHHHHHHHHHCCHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCC LPAQIELAAPGPRIAIDLVPANVPAQGGQRRYIGHWPREVVGVATLSLREAASARLLMDA CCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAASRSPVEVARSVPVDAAADVAAQAPGAEPAQPAALGFHEPMYFVAGGRNPRSARYQLS HHCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEE FRYRIFDQQGVVAEALPVTRGLYFGFTQTSVWDLESDSKPFRDTSFRPSLFYQWKLLDPS EEEEEECCCCCCHHHHHHHCCEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCC DGASLTLAGGYEHESNGRSGLESRSIDTFFVRGDARYYFGDGQTYFAVAPKAWHYIDKDD CCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCEEEEECCCCEEECCCCC NPDITRYRGYAELGLRFGRDDGLLLAAQLRRGTAGVGSTQLDLSYPLRRSVFSGVGAFLH CCCHHHCCCHHHHCEEECCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCCEEEE LQYFNGYGETLLDYNEARSPQIRIGLSLVR EEEECCCCCHHHCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]