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The map label for this gene is yhdH [H]

Identifier: 119899471

GI number: 119899471

Start: 3492225

End: 3493199

Strand: Reverse

Name: yhdH [H]

Synonym: azo3181

Alternate gene names: 119899471

Gene position: 3493199-3492225 (Counterclockwise)

Preceding gene: 119899475

Following gene: 119899470

Centisome position: 79.83

GC content: 68.1

Gene sequence:

>975_bases
GTGATCGACCAGGACGAAAACAAGAAGGTGGGCGGCAGCCTGACGACTCTGAGCACCGATGCGCTGGACGCCGGGGAGGT
GCTGATCCGCGTTCATTACTCCAGCATCAACTACAAGGATGCGCTGGCCGCGACGGGCGCGGGCAAGATCATCCGCCGGT
TTCCCTGCGTGGGCGGCATCGACCTTGCCGGCGAGGTGGTGGAGAGCGGCGCTGCCGGCTTTCTTCCCGGCGACAAGGTC
ATCGCCACCAGTTTCGACATCGGCGTCGCTCATCATGGCGGCTATGCCGAGTACGCCCGGGTGCCCGCGCAGTGGGTGTT
GCGCTTGCCGCCCGGGCTGAGCCTGTTCGAGTCGATGGCGCTGGGCACCGCGGGGTTCACCGCCGCGCTCGCGATCGTGC
GGATGGAAGACAACGGCCTGGCGCCCGCCAATGGTCCGGTCATCGTCACCGGGGCAACCGGCGGCGTGGGCGGGTTGGCG
ATCGACATGCTGGCCAGCCTCGGTTACCACGTTGTCGCGCTGACCGGAAAGGAAGCGGAAGCCGGGTATCTGAAGATGCT
TGGGGCGAGCGAGATCAAGCTGCGCAGCAGCATCGACTTCGACGCCGCCCGGCCGCTGGAGGCCGCGCAGTGGGCCGGCG
CGGTCGACAACGTCGGCGGGCAGGTGTTGCACTGGGTGCTGGCGACCATGAAGCAGGCCGGCACCGTCGCCAGCATCGGC
AACGCCGCCAGCTTCAACATCAGCACCACGGTGTTCCCGTTCATCCTGCGCGGCGTCAGCCTGCTCGGGGTCGATTCCGG
CTACATGGGCTTTCCGATGCGGCAGCGGGTCTGGGACCGGCTCGCCACCGACCTCAAGCCCCGCCATCTCGCGGCCGTTA
CCCGGACTATCGCGTTCGATGACCTGCCGGGCGCGTTCGAGGCCTTCATCCGGGGGCAGGTCAAGGGCCGGACGGTCGTC
CGGATCGGCGCCTGA

Upstream 100 bases:

>100_bases
TCGCTATAATCGTCCCTCCGGCCGCAACGCTTGTGGCCGCGCCTTCGGAAAGCGGTGCATCAACCAGGAGATTTACGTGG
CGACATCCTTCAGGGCTTTC

Downstream 100 bases:

>100_bases
GTGCAGCCGGGTTGTGGAGAGCGTTTTGATGAGCACTGAGGACGGCACGACCGCCATGAGCAAGGTGCTCGTCGTGGACG
ATTCGCGCATGGTGCGCGCA

Product: dehydrogenase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MIDQDENKKVGGSLTTLSTDALDAGEVLIRVHYSSINYKDALAATGAGKIIRRFPCVGGIDLAGEVVESGAAGFLPGDKV
IATSFDIGVAHHGGYAEYARVPAQWVLRLPPGLSLFESMALGTAGFTAALAIVRMEDNGLAPANGPVIVTGATGGVGGLA
IDMLASLGYHVVALTGKEAEAGYLKMLGASEIKLRSSIDFDAARPLEAAQWAGAVDNVGGQVLHWVLATMKQAGTVASIG
NAASFNISTTVFPFILRGVSLLGVDSGYMGFPMRQRVWDRLATDLKPRHLAAVTRTIAFDDLPGAFEAFIRGQVKGRTVV
RIGA

Sequences:

>Translated_324_residues
MIDQDENKKVGGSLTTLSTDALDAGEVLIRVHYSSINYKDALAATGAGKIIRRFPCVGGIDLAGEVVESGAAGFLPGDKV
IATSFDIGVAHHGGYAEYARVPAQWVLRLPPGLSLFESMALGTAGFTAALAIVRMEDNGLAPANGPVIVTGATGGVGGLA
IDMLASLGYHVVALTGKEAEAGYLKMLGASEIKLRSSIDFDAARPLEAAQWAGAVDNVGGQVLHWVLATMKQAGTVASIG
NAASFNISTTVFPFILRGVSLLGVDSGYMGFPMRQRVWDRLATDLKPRHLAAVTRTIAFDDLPGAFEAFIRGQVKGRTVV
RIGA
>Mature_324_residues
MIDQDENKKVGGSLTTLSTDALDAGEVLIRVHYSSINYKDALAATGAGKIIRRFPCVGGIDLAGEVVESGAAGFLPGDKV
IATSFDIGVAHHGGYAEYARVPAQWVLRLPPGLSLFESMALGTAGFTAALAIVRMEDNGLAPANGPVIVTGATGGVGGLA
IDMLASLGYHVVALTGKEAEAGYLKMLGASEIKLRSSIDFDAARPLEAAQWAGAVDNVGGQVLHWVLATMKQAGTVASIG
NAASFNISTTVFPFILRGVSLLGVDSGYMGFPMRQRVWDRLATDLKPRHLAAVTRTIAFDDLPGAFEAFIRGQVKGRTVV
RIGA

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=322, Percent_Identity=45.3416149068323, Blast_Score=270, Evalue=9e-74,
Organism=Saccharomyces cerevisiae, GI6319621, Length=331, Percent_Identity=25.6797583081571, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6323961, Length=324, Percent_Identity=26.2345679012346, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323729, Length=328, Percent_Identity=25.609756097561, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324486, Length=326, Percent_Identity=25.4601226993865, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 33783; Mature: 33783

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDQDENKKVGGSLTTLSTDALDAGEVLIRVHYSSINYKDALAATGAGKIIRRFPCVGGI
CCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHCCHHHHHHHCCCCCCC
DLAGEVVESGAAGFLPGDKVIATSFDIGVAHHGGYAEYARVPAQWVLRLPPGLSLFESMA
CHHHHHHHCCCCCCCCCCCEEEEEECEEEEECCCHHHHHHCCHHHEEECCCCHHHHHHHH
LGTAGFTAALAIVRMEDNGLAPANGPVIVTGATGGVGGLAIDMLASLGYHVVALTGKEAE
CCCCCHHHEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCC
AGYLKMLGASEIKLRSSIDFDAARPLEAAQWAGAVDNVGGQVLHWVLATMKQAGTVASIG
CCHHEECCCCCEEEECCCCCCCCCCCHHHHHCCCHHHCCHHHHHHHHHHHHHCCCEEECC
NAASFNISTTVFPFILRGVSLLGVDSGYMGFPMRQRVWDRLATDLKPRHLAAVTRTIAFD
CCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
DLPGAFEAFIRGQVKGRTVVRIGA
CCCHHHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure
MIDQDENKKVGGSLTTLSTDALDAGEVLIRVHYSSINYKDALAATGAGKIIRRFPCVGGI
CCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHCCHHHHHHHCCCCCCC
DLAGEVVESGAAGFLPGDKVIATSFDIGVAHHGGYAEYARVPAQWVLRLPPGLSLFESMA
CHHHHHHHCCCCCCCCCCCEEEEEECEEEEECCCHHHHHHCCHHHEEECCCCHHHHHHHH
LGTAGFTAALAIVRMEDNGLAPANGPVIVTGATGGVGGLAIDMLASLGYHVVALTGKEAE
CCCCCHHHEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCC
AGYLKMLGASEIKLRSSIDFDAARPLEAAQWAGAVDNVGGQVLHWVLATMKQAGTVASIG
CCHHEECCCCCEEEECCCCCCCCCCCHHHHHCCCHHHCCHHHHHHHHHHHHHCCCEEECC
NAASFNISTTVFPFILRGVSLLGVDSGYMGFPMRQRVWDRLATDLKPRHLAAVTRTIAFD
CCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
DLPGAFEAFIRGQVKGRTVVRIGA
CCCHHHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]