Click here to switch to the map view.

The map label for this gene is perM [C]

Identifier: 119899427

GI number: 119899427

Start: 3446157

End: 3447275

Strand: Direct

Name: perM [C]

Synonym: azo3137

Alternate gene names: 119899427

Gene position: 3446157-3447275 (Clockwise)

Preceding gene: 119899422

Following gene: 119899428

Centisome position: 78.75

GC content: 69.97

Gene sequence:

>1119_bases
ATGACCTCCGCCCGCGCCGACCGCCTGCAGACCGCCGCCTGGGCCCTGGTCGCGCTCGCGCTGGTCGGGCTGTTCTGGCT
GCTGTCGCCCATCCTCGCGCCGTTCGCGGTGGCCGCGGTGTTCGCCTACATCTGCGACCCTGCCGTCAACTGGATGGTCG
TGCGGCGGGTGCCGCGCCCGGCCGCCGTGCTGCTGGTCATCACCGGCCTGGCCCTGATCCTGGTCGCGCTGACGCTGATC
CTGGTGCCGATGCTGTACCGCGAGGCGGTGACGCTGATCCAGCGTCTGCCCGATCTGGTCGAAGTCTTCAACCAGCGCGC
CGCCCCGCTGCTGCGCGAGCACCTCGGCATCCGCCTGCAGCTCGACGCCGGCCAGGCGCGCAAGTGGCTGGCGCAGAACG
CCGACACCGCGCAGGACGTGATCCCGATCCTGCTCGGCCACATCAAGACCGGCGGCCTCGCGCTGATCGCCCTGGTCGCC
AATCTCTTCCTGGTGCCGGTGGTGATGTTCTACCTGCTGCAGGACTGGCCGCGCCTGCTCGCCGCGCTGCAGCGCTCGGT
GCCGCGGCCCTGGCTGGAGCGGACGATGCGCATCATCCGCGACATCGATTCGGTGCTGTCCGAGTTCCTGCGCGGGCAGC
TGTCGGTGATGCTGCTGCTCGCGGTGTTCTACAGCGTCGGGCTGTGGCTGGCGGGGCTCAACTTCGCATTGCCGGTCGGG
GTCATCACCGGCCTGCTGGTCTTCATTCCCTACGTCGGCTTCGGCGGCGGGCTGGTGCTGGCCATCCTCGCCGCGCTGCT
GCAAGGCGACGGCTGGTCGACGCTGATCGGTGTAGGCGTGGTCTACGGCCTCGGCCAGCTCATCGAAAGCTTCGCGCTGA
CGCCCTATCTGGTGGGCGAGCGCATCGGCCTGCACCCGCTCGCGGTGATCTTCGCGCTGATGGCCTTCGGCCAGTTGTTC
GGCTTCGTCGGCGTGCTGGTTGCGCTGCCGGTCAGCGCGGCGCTGCTGGTCGCACTGCGCGAAGTGCGCAGCGCATGGTT
CAGCAGCCGGCTCTACCTCGGCACCGGGCCGCACATCGCCACCGGCGCCGAAATCCAGGACATGGACGCGCCGCGGTGA

Upstream 100 bases:

>100_bases
GTGCGCGATTTTACTTGAAATACCCCCGGTGACACCCGCTTTCTCGCTCGCCCCGTCCACTCGTAACGACACCGCCGTAC
CGGCCCAGCCCTCTTCGCCC

Downstream 100 bases:

>100_bases
AGCAACTCGTACTCGACATCCGCCCCGACGCGCCGCCGTCGCTCGACAACTTCGTCGCCGGCGCCAACGCCGAACTGCTC
GCCGCGCTGTCGCTGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTSARADRLQTAAWALVALALVGLFWLLSPILAPFAVAAVFAYICDPAVNWMVVRRVPRPAAVLLVITGLALILVALTLI
LVPMLYREAVTLIQRLPDLVEVFNQRAAPLLREHLGIRLQLDAGQARKWLAQNADTAQDVIPILLGHIKTGGLALIALVA
NLFLVPVVMFYLLQDWPRLLAALQRSVPRPWLERTMRIIRDIDSVLSEFLRGQLSVMLLLAVFYSVGLWLAGLNFALPVG
VITGLLVFIPYVGFGGGLVLAILAALLQGDGWSTLIGVGVVYGLGQLIESFALTPYLVGERIGLHPLAVIFALMAFGQLF
GFVGVLVALPVSAALLVALREVRSAWFSSRLYLGTGPHIATGAEIQDMDAPR

Sequences:

>Translated_372_residues
MTSARADRLQTAAWALVALALVGLFWLLSPILAPFAVAAVFAYICDPAVNWMVVRRVPRPAAVLLVITGLALILVALTLI
LVPMLYREAVTLIQRLPDLVEVFNQRAAPLLREHLGIRLQLDAGQARKWLAQNADTAQDVIPILLGHIKTGGLALIALVA
NLFLVPVVMFYLLQDWPRLLAALQRSVPRPWLERTMRIIRDIDSVLSEFLRGQLSVMLLLAVFYSVGLWLAGLNFALPVG
VITGLLVFIPYVGFGGGLVLAILAALLQGDGWSTLIGVGVVYGLGQLIESFALTPYLVGERIGLHPLAVIFALMAFGQLF
GFVGVLVALPVSAALLVALREVRSAWFSSRLYLGTGPHIATGAEIQDMDAPR
>Mature_371_residues
TSARADRLQTAAWALVALALVGLFWLLSPILAPFAVAAVFAYICDPAVNWMVVRRVPRPAAVLLVITGLALILVALTLIL
VPMLYREAVTLIQRLPDLVEVFNQRAAPLLREHLGIRLQLDAGQARKWLAQNADTAQDVIPILLGHIKTGGLALIALVAN
LFLVPVVMFYLLQDWPRLLAALQRSVPRPWLERTMRIIRDIDSVLSEFLRGQLSVMLLLAVFYSVGLWLAGLNFALPVGV
ITGLLVFIPYVGFGGGLVLAILAALLQGDGWSTLIGVGVVYGLGQLIESFALTPYLVGERIGLHPLAVIFALMAFGQLFG
FVGVLVALPVSAALLVALREVRSAWFSSRLYLGTGPHIATGAEIQDMDAPR

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=333, Percent_Identity=27.9279279279279, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40286; Mature: 40155

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSARADRLQTAAWALVALALVGLFWLLSPILAPFAVAAVFAYICDPAVNWMVVRRVPRP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AAVLLVITGLALILVALTLILVPMLYREAVTLIQRLPDLVEVFNQRAAPLLREHLGIRLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LDAGQARKWLAQNADTAQDVIPILLGHIKTGGLALIALVANLFLVPVVMFYLLQDWPRLL
ECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALQRSVPRPWLERTMRIIRDIDSVLSEFLRGQLSVMLLLAVFYSVGLWLAGLNFALPVG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VITGLLVFIPYVGFGGGLVLAILAALLQGDGWSTLIGVGVVYGLGQLIESFALTPYLVGE
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
RIGLHPLAVIFALMAFGQLFGFVGVLVALPVSAALLVALREVRSAWFSSRLYLGTGPHIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
TGAEIQDMDAPR
CCCCCCCCCCCC
>Mature Secondary Structure 
TSARADRLQTAAWALVALALVGLFWLLSPILAPFAVAAVFAYICDPAVNWMVVRRVPRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AAVLLVITGLALILVALTLILVPMLYREAVTLIQRLPDLVEVFNQRAAPLLREHLGIRLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LDAGQARKWLAQNADTAQDVIPILLGHIKTGGLALIALVANLFLVPVVMFYLLQDWPRLL
ECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALQRSVPRPWLERTMRIIRDIDSVLSEFLRGQLSVMLLLAVFYSVGLWLAGLNFALPVG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VITGLLVFIPYVGFGGGLVLAILAALLQGDGWSTLIGVGVVYGLGQLIESFALTPYLVGE
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
RIGLHPLAVIFALMAFGQLFGFVGVLVALPVSAALLVALREVRSAWFSSRLYLGTGPHIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
TGAEIQDMDAPR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]