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The map label for this gene is dnaL [H]

Identifier: 119899420

GI number: 119899420

Start: 3437383

End: 3438279

Strand: Reverse

Name: dnaL [H]

Synonym: azo3130

Alternate gene names: 119899420

Gene position: 3438279-3437383 (Counterclockwise)

Preceding gene: 119899423

Following gene: 119899417

Centisome position: 78.57

GC content: 73.36

Gene sequence:

>897_bases
TTGAACTCACGCCCGCCTTTCGCGCTTAGCCTGCTCGCCGCCGCCTGTGTGGCACTCGCCCTGCTGTCGGTCTTGCCGGC
AAATGCGATCGAACCCGCGGCTGCGGAGCGCGCGCCGGCTGTCGTTCCGCCGGCGCTGATGCTGGCGGGGCGCTATCGCG
ACGACATCGATCCGGCCGCCTATCTGGTCAGCGAAAAGCTGGATGGTGTGCGCGCCTACTGGGACGGCACCGCGCTGCGC
TTTCGCAGCGGACAGCCGATCGAGGCGCCCGGCTGGTTTGTCGCCGCGTTGCCGCGCCGTCCGCTCGACGGCGAACTGTG
GCTGGGGCGCGGACGTTTCGAGGCGCTCTCCGGCCTCGTGCGGCGCCAGCAGCCGGACGACGCGGGCTGGCGGGCGGTGC
GCTACATGGTGTTCGAGCTGCCGGCAGCGGCGGGGCCGTTTGCTGCCCGCGAGGCCGAGCTGCGCCGCATCGTCGCCGCT
GCCGGGGTGCCCTGGCTGCAGGCCGTCGCACAATCCCGCGTGCGGGACCGGGCCGAACTGCAGGCACGTCTGGCTGCAAC
CGTGAAGGCGGGCGGTGAGGGTCTGATGCTGCACCGGGCCGATGCGGCCTGGCGCCCCGGGCGGGTCGATACCCTGCTCA
AGCTGACGCCCTGGCTGGACGACGAGGCGCGGGTGGTGGGGTATGTCGCCGGCAAGGGGCGGCTTGCCGGCGTCGTCGGC
GCGCTGGAGGTCGAGGCCGCAGACGGCCGCCGCTTCCGCCTCGGCAGCGGGCTCGACGACGCGCAGCGCCGCGCGCCTCC
GCCCGTCGGCAGCCTCGTCACCTATCGCTACCGCGAACTCACCGGCAAGGGGCTGCCCCGCTTTCCGCGCTTCCTGCGGG
TGCGCGAACTCCCCTAG

Upstream 100 bases:

>100_bases
GGCGCACGCGTAAGGCGGAGAAGGATGCGTTCCGGGTGATGCAAATGGCATTATTGCGGGCCGCGCCTCGCTCGCGCGCC
CATTCACCCAGGAGTCCGCC

Downstream 100 bases:

>100_bases
CGCTGTCCGCTCAGCGGCGGACGATTTCCATCTGGTGACGCTCCAGGCCGACGCTGGTGGTGGCGTTGCCGTCGCCGCAG
CTCCACCACATGGTGACCCA

Product: DNA ligase

Products: NA

Alternate protein names: Polydeoxyribonucleotide synthase [ATP] [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MNSRPPFALSLLAAACVALALLSVLPANAIEPAAAERAPAVVPPALMLAGRYRDDIDPAAYLVSEKLDGVRAYWDGTALR
FRSGQPIEAPGWFVAALPRRPLDGELWLGRGRFEALSGLVRRQQPDDAGWRAVRYMVFELPAAAGPFAAREAELRRIVAA
AGVPWLQAVAQSRVRDRAELQARLAATVKAGGEGLMLHRADAAWRPGRVDTLLKLTPWLDDEARVVGYVAGKGRLAGVVG
ALEVEAADGRRFRLGSGLDDAQRRAPPPVGSLVTYRYRELTGKGLPRFPRFLRVRELP

Sequences:

>Translated_298_residues
MNSRPPFALSLLAAACVALALLSVLPANAIEPAAAERAPAVVPPALMLAGRYRDDIDPAAYLVSEKLDGVRAYWDGTALR
FRSGQPIEAPGWFVAALPRRPLDGELWLGRGRFEALSGLVRRQQPDDAGWRAVRYMVFELPAAAGPFAAREAELRRIVAA
AGVPWLQAVAQSRVRDRAELQARLAATVKAGGEGLMLHRADAAWRPGRVDTLLKLTPWLDDEARVVGYVAGKGRLAGVVG
ALEVEAADGRRFRLGSGLDDAQRRAPPPVGSLVTYRYRELTGKGLPRFPRFLRVRELP
>Mature_298_residues
MNSRPPFALSLLAAACVALALLSVLPANAIEPAAAERAPAVVPPALMLAGRYRDDIDPAAYLVSEKLDGVRAYWDGTALR
FRSGQPIEAPGWFVAALPRRPLDGELWLGRGRFEALSGLVRRQQPDDAGWRAVRYMVFELPAAAGPFAAREAELRRIVAA
AGVPWLQAVAQSRVRDRAELQARLAATVKAGGEGLMLHRADAAWRPGRVDTLLKLTPWLDDEARVVGYVAGKGRLAGVVG
ALEVEAADGRRFRLGSGLDDAQRRAPPPVGSLVTYRYRELTGKGLPRFPRFLRVRELP

Specific function: Catalyzes efficient strand joining on a single nicked DNA [H]

COG id: COG1793

COG function: function code L; ATP-dependent DNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent DNA ligase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012310
- InterPro:   IPR016059
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF01068 DNA_ligase_A_M [H]

EC number: =6.5.1.1 [H]

Molecular weight: Translated: 32351; Mature: 32351

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRPPFALSLLAAACVALALLSVLPANAIEPAAAERAPAVVPPALMLAGRYRDDIDPAA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHCCCCCCCCHHH
YLVSEKLDGVRAYWDGTALRFRSGQPIEAPGWFVAALPRRPLDGELWLGRGRFEALSGLV
HHHHHHHCCCEEEECCCEEEECCCCCCCCCCEEEEECCCCCCCCCEEECCCHHHHHHHHH
RRQQPDDAGWRAVRYMVFELPAAAGPFAAREAELRRIVAAAGVPWLQAVAQSRVRDRAEL
HHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QARLAATVKAGGEGLMLHRADAAWRPGRVDTLLKLTPWLDDEARVVGYVAGKGRLAGVVG
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHEEECCCCCCCCEEEEEEECCCCEEEEEE
ALEVEAADGRRFRLGSGLDDAQRRAPPPVGSLVTYRYRELTGKGLPRFPRFLRVRELP
EEEEEECCCCEEECCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MNSRPPFALSLLAAACVALALLSVLPANAIEPAAAERAPAVVPPALMLAGRYRDDIDPAA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHCCCCCCCCHHH
YLVSEKLDGVRAYWDGTALRFRSGQPIEAPGWFVAALPRRPLDGELWLGRGRFEALSGLV
HHHHHHHCCCEEEECCCEEEECCCCCCCCCCEEEEECCCCCCCCCEEECCCHHHHHHHHH
RRQQPDDAGWRAVRYMVFELPAAAGPFAAREAELRRIVAAAGVPWLQAVAQSRVRDRAEL
HHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QARLAATVKAGGEGLMLHRADAAWRPGRVDTLLKLTPWLDDEARVVGYVAGKGRLAGVVG
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHEEECCCCCCCCEEEEEEECCCCEEEEEE
ALEVEAADGRRFRLGSGLDDAQRRAPPPVGSLVTYRYRELTGKGLPRFPRFLRVRELP
EEEEEECCCCEEECCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550458; 7542800; 9060431 [H]