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The map label for this gene is nosC

Identifier: 119899393

GI number: 119899393

Start: 3412240

End: 3412638

Strand: Direct

Name: nosC

Synonym: azo3103

Alternate gene names: NA

Gene position: 3412240-3412638 (Clockwise)

Preceding gene: 119899391

Following gene: 119899406

Centisome position: 77.98

GC content: 73.18

Gene sequence:

>399_bases
ATGAAACACAGCCTGATCGTCGCCGCCCTTCTCGCCGCCCTTCTCGCCGGCCTGCTCGGCGCCTGCAGCAAGCAGGAGAG
CGCCCCCGCCGCGCCCAGCGCCCCGGTTGCCGCCCCCGCGCCCGCGCCGGCCCCCGTCGCCCAGAACACCGCCGGTGAAG
GCGTCTACAAGAAGGTGTGCGCGATGTGCCACGCCGCCGGTGTGGCGGGCGCGCCCAAGCCCGGCGACAAGGCCGACTGG
GGCCCGCGCATCGCGCAGGGCGCCGACACGCTGTACAAGCACGCGCTGGACGGCTTTACCGGCCAGAAAGGCATGATGCC
GGCGCGTGGCGGCGCGGCCACGCTGACCGACGACGAGGTGAAGGCGGCGGTGGACCACATGGTGGCCAAGTCGCAGTAA

Upstream 100 bases:

>100_bases
CTTTTCGCACGCGGCTTCGTAGCATGGGCTCCACTCGACGCCGACCGCGCCTTCAATGGCCGGCGCGATCCCCGCCACAG
AACCCCTCCTGGAGTCCGTC

Downstream 100 bases:

>100_bases
GCCGCTTTGTTTGCCCGCCGGGCTGACGGCCGCCGCGCGCTCCCCCGCGCGGGGGGCGTCAGCCGCCTGCGCGGGCGCGC
GCGGCCATCTGCCGCAGGCG

Product: cytochrome c5

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKHSLIVAALLAALLAGLLGACSKQESAPAAPSAPVAAPAPAPAPVAQNTAGEGVYKKVCAMCHAAGVAGAPKPGDKADW
GPRIAQGADTLYKHALDGFTGQKGMMPARGGAATLTDDEVKAAVDHMVAKSQ

Sequences:

>Translated_132_residues
MKHSLIVAALLAALLAGLLGACSKQESAPAAPSAPVAAPAPAPAPVAQNTAGEGVYKKVCAMCHAAGVAGAPKPGDKADW
GPRIAQGADTLYKHALDGFTGQKGMMPARGGAATLTDDEVKAAVDHMVAKSQ
>Mature_132_residues
MKHSLIVAALLAALLAGLLGACSKQESAPAAPSAPVAAPAPAPAPVAQNTAGEGVYKKVCAMCHAAGVAGAPKPGDKADW
GPRIAQGADTLYKHALDGFTGQKGMMPARGGAATLTDDEVKAAVDHMVAKSQ

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13066; Mature: 13066

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSLIVAALLAALLAGLLGACSKQESAPAAPSAPVAAPAPAPAPVAQNTAGEGVYKKVC
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AMCHAAGVAGAPKPGDKADWGPRIAQGADTLYKHALDGFTGQKGMMPARGGAATLTDDEV
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
KAAVDHMVAKSQ
HHHHHHHHHCCC
>Mature Secondary Structure
MKHSLIVAALLAALLAGLLGACSKQESAPAAPSAPVAAPAPAPAPVAQNTAGEGVYKKVC
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AMCHAAGVAGAPKPGDKADWGPRIAQGADTLYKHALDGFTGQKGMMPARGGAATLTDDEV
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
KAAVDHMVAKSQ
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]