| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yyaM [H]
Identifier: 119899353
GI number: 119899353
Start: 3372179
End: 3373117
Strand: Reverse
Name: yyaM [H]
Synonym: azo3063
Alternate gene names: 119899353
Gene position: 3373117-3372179 (Counterclockwise)
Preceding gene: 119899355
Following gene: 119899352
Centisome position: 77.08
GC content: 73.91
Gene sequence:
>939_bases ATGCCCCTGACCTTTACCCGCAGCGTCGCCGGCCACCGCGGCCGCGCACCCCTGGCCGACCTGCCGCTGATGCTGGTGGC GCCCGCGCTGTTCGCCGCCAACATGGTGGCCGCGCGCTGGGCCGAAAGCGCCGCCATCCCGCCGGTCTTCCTGGCGTTCG GGCGCTGGGCGCTGGCGTTCGCGATCTTCTTTCCCTTCGTCGCTGCGCGCGTGCGCGCCCATCGTGCGCTGTTGCGCGCG CATGCGCCGGACCTGGCGCTGCTCGCCGTGCTCGGCATGGGGCTGACGGTGGCGCCGCAGTACATCGGCGCGCAGGAAAC CAGCGCCACCAATGTCGCGCTGATCTTCGCCGCGTGTCCGGCGCTGGTCGCGCTGATCGAGGCGCTGGTGTGGCGCGCGC CGGTGGGCAGCGTGCGCGCGGCGGGCATGTCGCTGGCGATCTGGGGTGTGTTGCTGGTGCTGACGCGGGGCGACCTCGCC GCGCTCGGCCGGCTGGCCTTCGGCCGTGGCGACCTGTGGGTGCTCGGCGCCGCGTGCGCGTGGTCGCTGTACACCGTGCT CGGCCGCCGCCGTGCGCTCGGTGCGCTGCCGGGCGAGGTGAAGCTGGCGGCGCTGATCGCGGGCGGGGCGCTGGCGCTGG CGCCCTTCGCCGCGCTGGAACTGGCGAGCGGCGCGGTACCCGATTTCGGCGACGGCCGGCTGTACGCGGCGTTGGTGTTC CTCGCCATCGTGCCCAGCCTCGGCGCCTATTTCTGCTACGACCGCCTGGTGGAGCGGGTGGGCGCGGCCGGCGCCAGCAT GTCGATGTACCTGATTCCGCTCTACGCGGCGCTGGCGGCGTGGCCGCTGCTGGGCGAAGTGCCTGCCTTCTTCCACGTTG CCGGCTTCGCGCTGATCCTCGGCGGCGTTGCGCTCGCGGGGCTGCAGAAGCGCCGCTGA
Upstream 100 bases:
>100_bases TGCCCACAAGGCGCGCAACAGGCCTCGGCAAACCGCCTTCCCCGATCCGGGAAGGCGGTGCTGCCCCGGCTTTCCCGGAT CACCCGCCGAGGAGGGCAGC
Downstream 100 bases:
>100_bases TCCTGCGCCGGGGCGGCCCGGCGCATTCTTTCCGCATGTTTCGCCACTGTCGCCGGGGCGGGCCGCGGTCCTAGAATCGA GCCACGGACATGCTGCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPLTFTRSVAGHRGRAPLADLPLMLVAPALFAANMVAARWAESAAIPPVFLAFGRWALAFAIFFPFVAARVRAHRALLRA HAPDLALLAVLGMGLTVAPQYIGAQETSATNVALIFAACPALVALIEALVWRAPVGSVRAAGMSLAIWGVLLVLTRGDLA ALGRLAFGRGDLWVLGAACAWSLYTVLGRRRALGALPGEVKLAALIAGGALALAPFAALELASGAVPDFGDGRLYAALVF LAIVPSLGAYFCYDRLVERVGAAGASMSMYLIPLYAALAAWPLLGEVPAFFHVAGFALILGGVALAGLQKRR
Sequences:
>Translated_312_residues MPLTFTRSVAGHRGRAPLADLPLMLVAPALFAANMVAARWAESAAIPPVFLAFGRWALAFAIFFPFVAARVRAHRALLRA HAPDLALLAVLGMGLTVAPQYIGAQETSATNVALIFAACPALVALIEALVWRAPVGSVRAAGMSLAIWGVLLVLTRGDLA ALGRLAFGRGDLWVLGAACAWSLYTVLGRRRALGALPGEVKLAALIAGGALALAPFAALELASGAVPDFGDGRLYAALVF LAIVPSLGAYFCYDRLVERVGAAGASMSMYLIPLYAALAAWPLLGEVPAFFHVAGFALILGGVALAGLQKRR >Mature_311_residues PLTFTRSVAGHRGRAPLADLPLMLVAPALFAANMVAARWAESAAIPPVFLAFGRWALAFAIFFPFVAARVRAHRALLRAH APDLALLAVLGMGLTVAPQYIGAQETSATNVALIFAACPALVALIEALVWRAPVGSVRAAGMSLAIWGVLLVLTRGDLAA LGRLAFGRGDLWVLGAACAWSLYTVLGRRRALGALPGEVKLAALIAGGALALAPFAALELASGAVPDFGDGRLYAALVFL AIVPSLGAYFCYDRLVERVGAAGASMSMYLIPLYAALAAWPLLGEVPAFFHVAGFALILGGVALAGLQKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32435; Mature: 32304
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTFTRSVAGHRGRAPLADLPLMLVAPALFAANMVAARWAESAAIPPVFLAFGRWALAF CCCEECCHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AIFFPFVAARVRAHRALLRAHAPDLALLAVLGMGLTVAPQYIGAQETSATNVALIFAACP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHCCHHHCCCCCCCCCHHHHHHHHHH ALVALIEALVWRAPVGSVRAAGMSLAIWGVLLVLTRGDLAALGRLAFGRGDLWVLGAACA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEHHHHH WSLYTVLGRRRALGALPGEVKLAALIAGGALALAPFAALELASGAVPDFGDGRLYAALVF HHHHHHHHHHHHHCCCCCHHEEHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LAIVPSLGAYFCYDRLVERVGAAGASMSMYLIPLYAALAAWPLLGEVPAFFHVAGFALIL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGVALAGLQKRR HHHHHHHHHCCC >Mature Secondary Structure PLTFTRSVAGHRGRAPLADLPLMLVAPALFAANMVAARWAESAAIPPVFLAFGRWALAF CCEECCHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AIFFPFVAARVRAHRALLRAHAPDLALLAVLGMGLTVAPQYIGAQETSATNVALIFAACP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHCCHHHCCCCCCCCCHHHHHHHHHH ALVALIEALVWRAPVGSVRAAGMSLAIWGVLLVLTRGDLAALGRLAFGRGDLWVLGAACA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEHHHHH WSLYTVLGRRRALGALPGEVKLAALIAGGALALAPFAALELASGAVPDFGDGRLYAALVF HHHHHHHHHHHHHCCCCCHHEEHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LAIVPSLGAYFCYDRLVERVGAAGASMSMYLIPLYAALAAWPLLGEVPAFFHVAGFALIL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGVALAGLQKRR HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]