| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is mas [H]
Identifier: 119899332
GI number: 119899332
Start: 3346059
End: 3347039
Strand: Reverse
Name: mas [H]
Synonym: azo3042
Alternate gene names: 119899332
Gene position: 3347039-3346059 (Counterclockwise)
Preceding gene: 119899333
Following gene: 119899331
Centisome position: 76.49
GC content: 74.41
Gene sequence:
>981_bases ATGCGCGCACTCGTCTGCCAGGAATTCGCCCCGCTCGACGCCCTGCAGGTCGGCGAACTGCCCGACCCGCAGCCGGCGGC CGGCGAAGTCGTCATCCGCGTCTCCGCGGCCGGCATCAACTTCTACGACACCCTGATCGTGCAGGGCAAATACCAGGTGA AGCCGGCGGCGCCGTTCTCGCCCGGCGGCGAAGTGGCCGGCACGGTCGCGGCGGTGGGCGAGGGCGTCAGCCATGTGCGG CCGGGCGACCGCGTGTGCGCCTTCACCTCTTACGGCGGCTATGCCGAACTGTGCCGCGCCAAGGCCAGCCAGACCTGGCC GCTGCCGGATGCGGTGGGCTTCGAGGCCGCCGCCGCCGGGCTGGTGACCTACGGCACCGCCTGGTTCGGCCTGCACGACC GCGCCCGCATCCAGGCCGGCGAAACCGTGCTGGTGCTCGGCGCCGCCGGCGGTGTCGGCCTGGCCGCGGTGCAGATCGCC AAGGCCGCCGGCGCGCGGGTGATCGCCGCCGCCGGCAGCGCCGAACGCCTGGCGCTGTGCCGCGAGCACGGCGCCGACGT GCTCATCGACTACACCGCCGCCGACCTCAAGGACGCGGTCAAGGCCGCCACCGGCGGACAGGGTGCCGACATCGTCGTCG ACGTGGTGGGCGGCGCCTACACCGAGGCCGCGCTGCGCGCCACCGCCTGGCGCGGCCGGGTGCTGATCATCGGCTTCGCC GCCGGCGAGATCCCGCGCATTCCCGCCAACCTGCTGCTGCTGAAGGGCTGCGAGGCGTCGGGCGTGTTCTGGGACGAGCT GATGCGGCGCGAGCCGCAGGAGGCCGCGCGCCAGGTGGCGGCGGTGCTCGACTGTTTTGCCGACGGCCGCTTGCGGCCGC CGGTCACCGCCGCCTGCGGTCTGGGCGGCGCGGTGGATGCGATGCGCGCGCTCGCCGGCCGCCAGGTCGCGGGCAAGCTC ATCGTGCTGCCGCAGCAATAG
Upstream 100 bases:
>100_bases TTCACCGGCCCCGAAGTGCGCGAGGGCCTCGCCGCGGTGCGCGAGCGCCGGCCGGCGGTGTTCCCGCCCAACGCGCCGTT CTGAAACGGGGAGATCGACC
Downstream 100 bases:
>100_bases CTTTACCTCACTACAACACCGATACACACGGCCCCCCGGCCCAACGGAGAACGACCATGGCTCAATACCAGTGCAGCGCC TGCTATTTCCCCTACAACGA
Product: NADPH quinone oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MRALVCQEFAPLDALQVGELPDPQPAAGEVVIRVSAAGINFYDTLIVQGKYQVKPAAPFSPGGEVAGTVAAVGEGVSHVR PGDRVCAFTSYGGYAELCRAKASQTWPLPDAVGFEAAAAGLVTYGTAWFGLHDRARIQAGETVLVLGAAGGVGLAAVQIA KAAGARVIAAAGSAERLALCREHGADVLIDYTAADLKDAVKAATGGQGADIVVDVVGGAYTEAALRATAWRGRVLIIGFA AGEIPRIPANLLLLKGCEASGVFWDELMRREPQEAARQVAAVLDCFADGRLRPPVTAACGLGGAVDAMRALAGRQVAGKL IVLPQQ
Sequences:
>Translated_326_residues MRALVCQEFAPLDALQVGELPDPQPAAGEVVIRVSAAGINFYDTLIVQGKYQVKPAAPFSPGGEVAGTVAAVGEGVSHVR PGDRVCAFTSYGGYAELCRAKASQTWPLPDAVGFEAAAAGLVTYGTAWFGLHDRARIQAGETVLVLGAAGGVGLAAVQIA KAAGARVIAAAGSAERLALCREHGADVLIDYTAADLKDAVKAATGGQGADIVVDVVGGAYTEAALRATAWRGRVLIIGFA AGEIPRIPANLLLLKGCEASGVFWDELMRREPQEAARQVAAVLDCFADGRLRPPVTAACGLGGAVDAMRALAGRQVAGKL IVLPQQ >Mature_326_residues MRALVCQEFAPLDALQVGELPDPQPAAGEVVIRVSAAGINFYDTLIVQGKYQVKPAAPFSPGGEVAGTVAAVGEGVSHVR PGDRVCAFTSYGGYAELCRAKASQTWPLPDAVGFEAAAAGLVTYGTAWFGLHDRARIQAGETVLVLGAAGGVGLAAVQIA KAAGARVIAAAGSAERLALCREHGADVLIDYTAADLKDAVKAATGGQGADIVVDVVGGAYTEAALRATAWRGRVLIIGFA AGEIPRIPANLLLLKGCEASGVFWDELMRREPQEAARQVAAVLDCFADGRLRPPVTAACGLGGAVDAMRALAGRQVAGKL IVLPQQ
Specific function: Catalyzes the elongation of N-fatty acyl-CoA with methylamalonyl-CoA (not malonyl-CoA) as the elongating agent to form mycocerosyl lipids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=326, Percent_Identity=32.2085889570552, Blast_Score=154, Evalue=8e-38, Organism=Homo sapiens, GI13236495, Length=326, Percent_Identity=32.2085889570552, Blast_Score=154, Evalue=8e-38, Organism=Homo sapiens, GI18379349, Length=311, Percent_Identity=32.7974276527331, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI194239676, Length=203, Percent_Identity=38.423645320197, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI22538446, Length=231, Percent_Identity=32.9004329004329, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI22538444, Length=231, Percent_Identity=32.9004329004329, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI24308257, Length=239, Percent_Identity=32.2175732217573, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI28557745, Length=283, Percent_Identity=30.3886925795053, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI41872631, Length=305, Percent_Identity=28.5245901639344, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI197927207, Length=188, Percent_Identity=28.7234042553192, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI47519420, Length=215, Percent_Identity=29.7674418604651, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI67078404, Length=326, Percent_Identity=25.7668711656442, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI226059159, Length=114, Percent_Identity=38.5964912280702, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI226059133, Length=114, Percent_Identity=38.5964912280702, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI226056130, Length=114, Percent_Identity=38.5964912280702, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI67078406, Length=300, Percent_Identity=25.6666666666667, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1790485, Length=246, Percent_Identity=36.1788617886179, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI87082125, Length=294, Percent_Identity=28.2312925170068, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI226510941, Length=245, Percent_Identity=29.3877551020408, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787572, Length=188, Percent_Identity=30.3191489361702, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17507255, Length=238, Percent_Identity=32.7731092436975, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17536829, Length=200, Percent_Identity=31.5, Blast_Score=78, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17556000, Length=179, Percent_Identity=27.3743016759777, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6319520, Length=336, Percent_Identity=28.2738095238095, Blast_Score=116, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6323961, Length=337, Percent_Identity=26.7062314540059, Blast_Score=87, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6324486, Length=338, Percent_Identity=27.5147928994083, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6319621, Length=343, Percent_Identity=24.198250728863, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6323729, Length=315, Percent_Identity=25.0793650793651, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI221330659, Length=294, Percent_Identity=25.5102040816327, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI19920632, Length=294, Percent_Identity=25.5102040816327, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24581345, Length=319, Percent_Identity=25.0783699059561, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI45550423, Length=163, Percent_Identity=32.5153374233129, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001227 - InterPro: IPR009081 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR000794 - InterPro: IPR011032 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016036 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020842 - InterPro: IPR020801 - InterPro: IPR020841 - InterPro: IPR020807 - InterPro: IPR020843 - InterPro: IPR013968 - InterPro: IPR006162 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00698 Acyl_transf_1; PF08240 ADH_N; PF00107 ADH_zinc_N; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF08659 KR; PF00550 PP-binding [H]
EC number: =2.3.1.111 [H]
Molecular weight: Translated: 33394; Mature: 33394
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS01162 QOR_ZETA_CRYSTAL ; PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALVCQEFAPLDALQVGELPDPQPAAGEVVIRVSAAGINFYDTLIVQGKYQVKPAAPFS CCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCEEECCCCCCC PGGEVAGTVAAVGEGVSHVRPGDRVCAFTSYGGYAELCRAKASQTWPLPDAVGFEAAAAG CCCCHHHHHHHHHCCHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHH LVTYGTAWFGLHDRARIQAGETVLVLGAAGGVGLAAVQIAKAAGARVIAAAGSAERLALC HHHHCEEEECCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHH REHGADVLIDYTAADLKDAVKAATGGQGADIVVDVVGGAYTEAALRATAWRGRVLIIGFA HHCCCCEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEEE AGEIPRIPANLLLLKGCEASGVFWDELMRREPQEAARQVAAVLDCFADGRLRPPVTAACG CCCCCCCCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCC LGGAVDAMRALAGRQVAGKLIVLPQQ CCHHHHHHHHHHCCHHCCEEEEECCC >Mature Secondary Structure MRALVCQEFAPLDALQVGELPDPQPAAGEVVIRVSAAGINFYDTLIVQGKYQVKPAAPFS CCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCEEECCCCCCC PGGEVAGTVAAVGEGVSHVRPGDRVCAFTSYGGYAELCRAKASQTWPLPDAVGFEAAAAG CCCCHHHHHHHHHCCHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHH LVTYGTAWFGLHDRARIQAGETVLVLGAAGGVGLAAVQIAKAAGARVIAAAGSAERLALC HHHHCEEEECCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHH REHGADVLIDYTAADLKDAVKAATGGQGADIVVDVVGGAYTEAALRATAWRGRVLIIGFA HHCCCCEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEEE AGEIPRIPANLLLLKGCEASGVFWDELMRREPQEAARQVAAVLDCFADGRLRPPVTAACG CCCCCCCCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCC LGGAVDAMRALAGRQVAGKLIVLPQQ CCHHHHHHHHHHCCHHCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1527058; 12788972 [H]