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The map label for this gene is omp32 [H]

Identifier: 119899307

GI number: 119899307

Start: 3315684

End: 3316808

Strand: Reverse

Name: omp32 [H]

Synonym: azo3017

Alternate gene names: 119899307

Gene position: 3316808-3315684 (Counterclockwise)

Preceding gene: 119899308

Following gene: 119899306

Centisome position: 75.79

GC content: 63.56

Gene sequence:

>1125_bases
ATGACGAAGAAAATCATCGCGATGGCGATTGCTGCCATTGCTTCCAGCGCTGCATTTGCCCAGACCAACGTCACCATCTA
CGGCAACATGGACATGGGTTACATGCATCGCAGCGGCGGCAGCGGCGCGGTGACCGGCGCGAACAGCAAGAAGCAGAGCG
CGCTCGAAAGCGCTGCCTCGGAAAGCTACATCGGCTTCAAGGGCGCGGAAGACCTGGGCAACGGCATGAAGGCCGTGTTC
GATCTGCAAATGCTGGTGGATCCGGACGTGAGCAGCACGTTCAGCACCGGCCGCTCGTATCTGGGCCTGGCCGGCGGCTT
CGGTACCGTCGTGGCGGGCTACCTCGACGGTCTGCGCTACGGCATCTACGGCAAGTACAACCCGTTCGGCAACTACTCGG
TCGGCAACTTCGCGTCGATGACCACGCAGTACGACCGCGCCGCCAACGCGCTGGCCTACATCTCCCCCAGCTTCAGCGGC
TTCACCCTGATCCTGGCGACCTCGACCAACACCCAGACCGAAGAAGGCGCGCTCAACGGCGTGCACGTGCCGGCCAAGAC
CCCGGGCGGCAACAAGGGCGACGACCGCCTGTTCTCCGCCAACCTGATCTACGCCAACGGCCCGCTGAGCGTCGATCTCG
ACTACGAAACCACCCAGGCCGTCGGCTATTCCAGCGGCCGCCTGTTCGTGCTGACGACCGGCGCCTCCTACGACTTCGGC
GTGGTCAAGGTTTCCGGTGTGTATGACGTGATCAAGGGTGACAAGAATTCGCTGATCGGCGGCAACATCGACCTCGGCGG
CTTCAACCTGGGCGGCCTGGGTACCGACGAGAAGTACGATCGCCGCAACTGGTTCGTCGGCGTGCAGGTTCCGCTGAACG
AGCGCGCCCGCCTGCTGGCGAGCTATGGCCAGGTCAAGGACAAGACGCTGTCGGATGCCGACGCCAGCAAGTGGGCGATC
GGCGCGCGTTACGCGCTGTCGAAGCGCACCGAGCTGTATGCCGACTACGCCCAGATCCGCAACGAGTCCAACGCTGCCTT
CACCATCAACCCCAAGGGCAACTCGCAGGGCCTGAGCGGTGTGGGTACGCGTGGTATCGCCGTGGGCATGAAGCACAGCT
TCTAA

Upstream 100 bases:

>100_bases
GCACTGCCCACCGCGCCATTCCCGCAATGGCATTGGGGGGCGCTGCCGGACTGGAGATGTCCGGCAGCAGACATCAAGTA
AAAAAACCTGGAGACGATCC

Downstream 100 bases:

>100_bases
GCCGGCATGGTTTGATCGACCCTGGCAGGGGTGGGCGGGCCGCAGCCTTCGGGTTGCGGCCCGTTTTTTCTTGCGACGGC
CGGGCGTTTCGCAGCCGCCG

Product: outer membrane porin protein

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MTKKIIAMAIAAIASSAAFAQTNVTIYGNMDMGYMHRSGGSGAVTGANSKKQSALESAASESYIGFKGAEDLGNGMKAVF
DLQMLVDPDVSSTFSTGRSYLGLAGGFGTVVAGYLDGLRYGIYGKYNPFGNYSVGNFASMTTQYDRAANALAYISPSFSG
FTLILATSTNTQTEEGALNGVHVPAKTPGGNKGDDRLFSANLIYANGPLSVDLDYETTQAVGYSSGRLFVLTTGASYDFG
VVKVSGVYDVIKGDKNSLIGGNIDLGGFNLGGLGTDEKYDRRNWFVGVQVPLNERARLLASYGQVKDKTLSDADASKWAI
GARYALSKRTELYADYAQIRNESNAAFTINPKGNSQGLSGVGTRGIAVGMKHSF

Sequences:

>Translated_374_residues
MTKKIIAMAIAAIASSAAFAQTNVTIYGNMDMGYMHRSGGSGAVTGANSKKQSALESAASESYIGFKGAEDLGNGMKAVF
DLQMLVDPDVSSTFSTGRSYLGLAGGFGTVVAGYLDGLRYGIYGKYNPFGNYSVGNFASMTTQYDRAANALAYISPSFSG
FTLILATSTNTQTEEGALNGVHVPAKTPGGNKGDDRLFSANLIYANGPLSVDLDYETTQAVGYSSGRLFVLTTGASYDFG
VVKVSGVYDVIKGDKNSLIGGNIDLGGFNLGGLGTDEKYDRRNWFVGVQVPLNERARLLASYGQVKDKTLSDADASKWAI
GARYALSKRTELYADYAQIRNESNAAFTINPKGNSQGLSGVGTRGIAVGMKHSF
>Mature_373_residues
TKKIIAMAIAAIASSAAFAQTNVTIYGNMDMGYMHRSGGSGAVTGANSKKQSALESAASESYIGFKGAEDLGNGMKAVFD
LQMLVDPDVSSTFSTGRSYLGLAGGFGTVVAGYLDGLRYGIYGKYNPFGNYSVGNFASMTTQYDRAANALAYISPSFSGF
TLILATSTNTQTEEGALNGVHVPAKTPGGNKGDDRLFSANLIYANGPLSVDLDYETTQAVGYSSGRLFVLTTGASYDFGV
VKVSGVYDVIKGDKNSLIGGNIDLGGFNLGGLGTDEKYDRRNWFVGVQVPLNERARLLASYGQVKDKTLSDADASKWAIG
ARYALSKRTELYADYAQIRNESNAAFTINPKGNSQGLSGVGTRGIAVGMKHSF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39401; Mature: 39270

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKIIAMAIAAIASSAAFAQTNVTIYGNMDMGYMHRSGGSGAVTGANSKKQSALESAAS
CCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEECCCCCCEEECCCCHHHHHHHHHHC
ESYIGFKGAEDLGNGMKAVFDLQMLVDPDVSSTFSTGRSYLGLAGGFGTVVAGYLDGLRY
CCCCCCCCHHHHCCCCEEEEEEEEEECCCCCHHHHCCCCCEEECCCHHHHHHHHHHHHEE
GIYGKYNPFGNYSVGNFASMTTQYDRAANALAYISPSFSGFTLILATSTNTQTEEGALNG
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCC
VHVPAKTPGGNKGDDRLFSANLIYANGPLSVDLDYETTQAVGYSSGRLFVLTTGASYDFG
EECCCCCCCCCCCCCEEEEEEEEEECCCEEEEECCCHHHHCCCCCCEEEEEEECCCCCEE
VVKVSGVYDVIKGDKNSLIGGNIDLGGFNLGGLGTDEKYDRRNWFVGVQVPLNERARLLA
EEEECCEEEECCCCCCCEECCCEEECCEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHH
SYGQVKDKTLSDADASKWAIGARYALSKRTELYADYAQIRNESNAAFTINPKGNSQGLSG
HHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
VGTRGIAVGMKHSF
CCCCCEEEECCCCC
>Mature Secondary Structure 
TKKIIAMAIAAIASSAAFAQTNVTIYGNMDMGYMHRSGGSGAVTGANSKKQSALESAAS
CHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEECCCCCCEEECCCCHHHHHHHHHHC
ESYIGFKGAEDLGNGMKAVFDLQMLVDPDVSSTFSTGRSYLGLAGGFGTVVAGYLDGLRY
CCCCCCCCHHHHCCCCEEEEEEEEEECCCCCHHHHCCCCCEEECCCHHHHHHHHHHHHEE
GIYGKYNPFGNYSVGNFASMTTQYDRAANALAYISPSFSGFTLILATSTNTQTEEGALNG
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCC
VHVPAKTPGGNKGDDRLFSANLIYANGPLSVDLDYETTQAVGYSSGRLFVLTTGASYDFG
EECCCCCCCCCCCCCEEEEEEEEEECCCEEEEECCCHHHHCCCCCCEEEEEEECCCCCEE
VVKVSGVYDVIKGDKNSLIGGNIDLGGFNLGGLGTDEKYDRRNWFVGVQVPLNERARLLA
EEEECCEEEECCCCCCCEECCCEEECCEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHH
SYGQVKDKTLSDADASKWAIGARYALSKRTELYADYAQIRNESNAAFTINPKGNSQGLSG
HHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
VGTRGIAVGMKHSF
CCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]