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The map label for this gene is ycaC [H]

Identifier: 119899280

GI number: 119899280

Start: 3285452

End: 3286078

Strand: Reverse

Name: ycaC [H]

Synonym: azo2990

Alternate gene names: 119899280

Gene position: 3286078-3285452 (Counterclockwise)

Preceding gene: 119899281

Following gene: 119899278

Centisome position: 75.09

GC content: 65.71

Gene sequence:

>627_bases
ATGGCCCAACCCTACGTCCGTCTCGACAAGAACAACGCCGCCGTACTGCTGGTCGATCACCAGGCCGGCCTGCTGTCCCT
GGTGCGCGACATCGAGCCCGACCGCTTCAAGAACAACGTGCTGGCGCTGGCCGACCTCGCCAAGTACTTCAAGCTGCCGA
CCATCCTCACCACCAGCTTCGAGGACGGCCCCAACGGGCCGCTGGTGCCGGAGCTGAAGGAGCTCTTTCCCGAGGCGCCG
TACATCGCCCGTCCCGGCCAGATCAACGCCTGGGACAACGCCGACTTCGTGCAGGCGGTGAAGGCCACCGGCAAGAAGCA
GCTGATCATCGCCGGCGTGGTGACCGAAGTGTGCGTGGCCTTCCCGGCGCTGTCCGCGCTGGAGGAGGGCTACGAGGTGT
TCGTGGTGACGGATGCCTCCGGCACCTTCAACGAACTCACCCGCGATTCCGCCTGGGACCGCATGTCCGCCGCGGGCGCG
CAGTTGATGACCTGGTTCGGCGCGGCGTGCGAACTGCACCGCGACTGGCGCAATGACATCGAGGGCCTGGGCACGCTGTT
CTCCAACCACATCCCGGACTACCGCAACCTCATCACCAGCTACACCACGCTGAAGGGCGGCAAGTAA

Upstream 100 bases:

>100_bases
GCGTGCGGCAATCCCGCCGCACGCCCCACCCGCCGCGCCGTCCGCTTCGCCCACGGGGCAGGGCGGCGCGGCATCCCCCA
GAGAGCAAAGGAGCAAAACC

Downstream 100 bases:

>100_bases
ACGGCAGCGCCCCGCCACCTTGCGGGTGGCGGGGCGCTTGTGCCGCTTCTTACTTCACATCGAAGCGGTCGAGGTTCATC
ACCTTGTTCCACGCGGCGAC

Product: putative isochorismatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAQPYVRLDKNNAAVLLVDHQAGLLSLVRDIEPDRFKNNVLALADLAKYFKLPTILTTSFEDGPNGPLVPELKELFPEAP
YIARPGQINAWDNADFVQAVKATGKKQLIIAGVVTEVCVAFPALSALEEGYEVFVVTDASGTFNELTRDSAWDRMSAAGA
QLMTWFGAACELHRDWRNDIEGLGTLFSNHIPDYRNLITSYTTLKGGK

Sequences:

>Translated_208_residues
MAQPYVRLDKNNAAVLLVDHQAGLLSLVRDIEPDRFKNNVLALADLAKYFKLPTILTTSFEDGPNGPLVPELKELFPEAP
YIARPGQINAWDNADFVQAVKATGKKQLIIAGVVTEVCVAFPALSALEEGYEVFVVTDASGTFNELTRDSAWDRMSAAGA
QLMTWFGAACELHRDWRNDIEGLGTLFSNHIPDYRNLITSYTTLKGGK
>Mature_207_residues
AQPYVRLDKNNAAVLLVDHQAGLLSLVRDIEPDRFKNNVLALADLAKYFKLPTILTTSFEDGPNGPLVPELKELFPEAPY
IARPGQINAWDNADFVQAVKATGKKQLIIAGVVTEVCVAFPALSALEEGYEVFVVTDASGTFNELTRDSAWDRMSAAGAQ
LMTWFGAACELHRDWRNDIEGLGTLFSNHIPDYRNLITSYTTLKGGK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=208, Percent_Identity=86.5384615384615, Blast_Score=379, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 22902; Mature: 22771

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQPYVRLDKNNAAVLLVDHQAGLLSLVRDIEPDRFKNNVLALADLAKYFKLPTILTTSF
CCCCCEEECCCCCEEEEEECCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCHHEEECC
EDGPNGPLVPELKELFPEAPYIARPGQINAWDNADFVQAVKATGKKQLIIAGVVTEVCVA
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHH
FPALSALEEGYEVFVVTDASGTFNELTRDSAWDRMSAAGAQLMTWFGAACELHRDWRNDI
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGLGTLFSNHIPDYRNLITSYTTLKGGK
HHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AQPYVRLDKNNAAVLLVDHQAGLLSLVRDIEPDRFKNNVLALADLAKYFKLPTILTTSF
CCCCEEECCCCCEEEEEECCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCHHEEECC
EDGPNGPLVPELKELFPEAPYIARPGQINAWDNADFVQAVKATGKKQLIIAGVVTEVCVA
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHH
FPALSALEEGYEVFVVTDASGTFNELTRDSAWDRMSAAGAQLMTWFGAACELHRDWRNDI
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGLGTLFSNHIPDYRNLITSYTTLKGGK
HHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]